Vespula pensylvanica (western yellowjacket): 122628102
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Entry
122628102 CDS
T07720
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122628102
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vps01009
]
122628102
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vps04131
]
122628102
03029 Mitochondrial biogenesis [BR:
vps03029
]
122628102
Protein phosphatases and associated proteins [BR:
vps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122628102
Membrane trafficking [BR:
vps04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122628102
Mitochondrial biogenesis [BR:
vps03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122628102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122628102
NCBI-ProteinID:
XP_043665895
LinkDB
All DBs
Position
3:338562..378133
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AA seq
1441 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVAQLKEAIERECGVVAVHQVLLMSGGESLEPNARVCS
YSAGTDTNPIYLFSKAAIESNLPPTPSIDYGSDVDLQTQIDTSLEMPATYQTLVARAQLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITQMFQSRAELLQQSFTVYLAER
QQQMQLLNNFQQDLETLAKIPILPALRAQAEGLLSPDDQAENSEQQSENSEEVLSLLRWI
SAKDNQSSLEQVAEQCSRGLEQFDERVMETLKAEVNAAIDNANKQDMKEIKGLGERLFAL
EQLMAQTKKLVHEQGELAQGFLQNQNRANNLGDASVLPDLCTSHRRQLVVMLQNHNQLRD
IRRRCTKAKEELSVNIYHRLKWIMYVENKMMEVDGKLVMYHESLKRLRRHLEVLQQIHLA
PQMYMRAVAEVVRRRTFSQAFLVWASNLACQLLTVHTEELARRREFQSKFDGHFLNTLFP
GLEDTPPAYATEAPSVFDNGLPKLTASDMESLRSQLPGLALSISTPDLNSITQFFLSKSL
TEASTEGNKEKESMSARVDGPSKEQDRVRVPALSDRGGFESETDTEEFEKIGQGTTDSKP
SSFDGTQQKRQKQLEVGASRSVSPASSSSTNVSPLNTKVADLTSRFSTSNEPGSFHFPSL
TIGERPSQLSPLTECAENGESSSQLQSATYGFPKHRQITPSVSSDKIEESNSLCPNPPTL
PHSVTCDGQQQQLQYYQLSGSGDSSPSIGVGATDFMGTEFYMDDSLPSSLSEPPADGHQA
IVSFLQESLGNTREEVERLRSILRSMKVVVSEALTSVRKELVVLRDRSDFGNSGFAELTE
RIREALTLYSNECDRRLREREQELTVDHELEMGDVKKLIQSRDEEIRIVKRTLLEKETEL
AEHERLLGTMRQKLDAEQADMRNLQSRLHRQMDETLEQARIDKETAVEKVNDEKFVEIAS
LTNSLTQCQKRIKELEENLAAARTEQQKMVKEATDKLQLEYKTELEAIRSRFKLTAVSIM
ERSPSDSSLEKIERPDVIELVNHEAILAQAKEDMKLEKSAAIRTAIEKERADCVAKLDHE
LRLARQVVQERERKIELYRIREAALMEECTWYKNTITRLTKCENLSREALNEKVENLETD
KAWHEGKLSSERKSRDQKENIVLIIESASRKEFGDDRLDMSQSNLGEAMKSLESDKDEVE
ASESKKVRLEADDDRSRLSRRLEILENDNKRLSAELKMIKESKEVSDAKVEALEADKVRL
EIELVKERSRRDFAESSSSSDGREKEMNASVAIVSGSSSSRDAATSPDGAVPYFHLSHLW
KKKNITKLVQQGRITVTTCNPGDMVLVVWDPIHWSYALLQESSTLYFVNSDCVESLGFTA
DGAPKIYEAIVEVINKEYCIARKSTNRYRVSQGTKFYQVRIKPVEDVVEKTKSQMAKGDG
E
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgctctacatatttcatgtggataccggtaccaccattactttcgacatcaagttggct
ctgcagagtgtcgctcaattaaaggaagcaatcgagagagaatgtggagttgtggcggtc
caccaggtgctcttgatgagcggaggcgaaagcttggaaccgaacgcccgtgtctgttcc
tactcggctggaaccgatacgaatccgatctatttattcagcaaggccgccattgagagc
aaccttccacccacgccaagcatagactacggttccgatgtggatcttcagactcaaatc
gatacttctctcgaaatgccagctacttatcagactctcgttgcacgcgcccaactcgct
caacaatgctgcgggctggcacgcgaacaaacgagaatctgcgagagactggttcacgat
caacatctccagcaacagggttgggccgcggtggttgccaatctcgaggacattacgcag
atgtttcaatcgagagcggaactattgcagcaaagttttaccgtttacctcgccgagagg
caacaacaaatgcaattgttgaacaacttccagcaggatttggaaactctagcaaagatt
ccaattttacctgcgctgagggcccaagcggaaggtctcctgagtccggacgatcaagca
gaaaactcggagcaacagtcagagaacagcgaggaagttttaagtcttcttcgatggatc
tccgcgaaggacaatcaaagtagtttggaacaggtggccgagcaatgcagccgaggcttg
gaacagttcgacgaaagggtgatggaaacgttgaaggccgaagtgaacgccgcgattgac
aatgcgaacaagcaagacatgaaagaaataaagggccttggggagaggctctttgctctg
gaacaactaatggcacaaacgaagaagctcgttcacgagcagggcgagctcgctcaggga
tttcttcagaatcaaaatcgcgcaaacaatctcggagatgcgagcgtattacccgatctc
tgtacctcgcataggaggcaattagtcgttatgcttcagaatcataatcagctgcgtgac
attcggcgcaggtgtaccaaagcaaaggaggagttgtccgttaatatctatcatcggttg
aaatggataatgtacgtggagaacaagatgatggaggtcgacggcaaactcgtgatgtat
cacgagagcctgaaacgtttgagacgtcatctcgaggtactgcagcagattcacttggca
cctcaaatgtatatgcgtgctgtcgccgaggtcgtcagaaggcgaaccttctctcaagcg
tttctcgtgtgggccagcaatctcgcttgtcagttgttgaccgtacatacggaggaactg
gcacgcaggcgcgagttccaaagtaaattcgacggtcacttcctgaataccctcttccct
ggtctggaggacacgccaccggcgtacgccacggaggctccctcggttttcgacaatgga
ttaccaaaattaactgcgagcgacatggagtccctgagatcgcaattgcccggtttagcg
ctgagcatctctacgccggatttgaacagcataacgcagttctttctgtcgaagagtctg
accgaagcaagcacggaagggaacaaagagaaagaaagtatgtcggcgcgggtggatggt
ccttccaaagagcaggatcgcgttagagtgccggcgctgagcgacagaggtggatttgag
tcggaaacggatacggaagagttcgagaaaataggacaagggacgacggattcgaaacct
agttccttcgacggcacccaacagaaacgtcagaaacaattggaggttggtgcctcgcga
agcgtgtcccccgcttcctccagctcgactaacgtctcgccattaaacacgaaggtcgca
gacctgacaagccgattttccacatcgaacgaacccggttccttccattttcctagtctt
accatcggcgaacgaccatctcagttaagtcctctcaccgagtgcgcggagaacggtgaa
tcttccagtcagttgcaaagtgctacatacggttttccaaagcatcggcaaataactccg
tccgtatcctccgacaagatcgaggagtcgaattccttgtgtccgaatcctcctacctta
cctcactccgtgacgtgcgacggccagcaacagcagctacagtattaccagctgtccggt
agcggtgatagcagcccttccatcggggttggcgctaccgacttcatgggtaccgagttt
tacatggacgattctttgccgagcagcctcagcgaacctcccgccgacgggcaccaggct
atcgtttcctttcttcaggagagcctcggcaatacccgcgaagaagtggaaagattgcgt
tcgattctaaggagtatgaaagtggtcgtgagcgaagccttgacctccgtccgaaaagag
ttggtcgttttacgagatcgatcggatttcggtaacagcggttttgcggagttgacagag
cgtattcgtgaggcgttaacgttgtactcgaacgagtgcgaccgtcgtttgcgagaacgc
gagcaagaattaaccgtagatcacgagctcgaaatgggtgacgttaagaagctgatacag
agccgagacgaagagatccgtatcgtgaagaggactctactggaaaaggaaaccgagttg
gccgagcacgaacgtttgctcggcacaatgcgtcagaaattggatgcggagcaagcggac
atgaggaatttacaatctcgtctacaccggcaaatggatgagaccttggaacaggctcgt
atcgacaaggaaacagccgtcgagaaggtaaatgacgagaagtttgtggaaatcgcttct
ttgaccaattccttaacccaatgtcagaaacgcataaaagaactcgaagagaatttggca
gctgctagaacggaacaacaaaagatggtgaaggaggctacggacaagttgcaattggag
tataaaaccgaattagaggctattagaagccgtttcaagttaacggcggttagtataatg
gaaaggagtcctagcgattcgagtttggaaaagatagagcggcccgacgttatcgaactt
gttaatcacgaggcgatattagcgcaagcgaaggaagatatgaaactcgagaaatcagca
gctatccgtaccgcgatcgaaaaagaacgtgccgattgcgtggccaaattggaccacgaa
cttcgattggccaggcaagtggtacaagagagggagagaaaaattgagttgtacaggata
agggaagctgcgcttatggaagaatgtacatggtataaaaatacgattacacgattaacc
aaatgtgaaaatttgtctagggaggcgctcaatgaaaaggtagagaatttggaaaccgac
aaagcttggcacgaagggaaactctcttccgagagaaagagtcgggatcaaaaagagaac
atagtccttataatcgaatcggcgtcgcgaaaggaattcggtgacgatcgtttggatatg
agtcaaagcaatttgggagaagccatgaaaagtttggaaagtgacaaggacgaggtcgag
gcttcggaatcaaaaaaagtacgattggaagcggacgacgatcgttctcgtttatcgaga
agactcgagattcttgagaacgacaataagagactatccgccgaattgaagatgattaaa
gagagtaaagaagtttctgacgccaaagtcgaggctttagaggccgataaggttcgcttg
gaaatcgaattggtgaaggaacgaagcagaagagatttcgcagagtcctcttcttcgtcc
gatggtcgcgaaaaggaaatgaacgcttccgttgccattgtttctggatcgtcatcgagt
cgcgatgctgcgactagtccggatggcgctgtaccttactttcacttgtcgcacctttgg
aagaaaaagaatattacaaaattggttcaacagggtcgtattacggtaaccacgtgcaat
cccggcgacatggtcctcgttgtttgggatccgattcattggagttacgccttgcttcag
gaatcctcgaccctttattttgtaaattcggattgcgtggagtccttaggatttactgcc
gacggggctcccaaaatatacgaagctatcgtcgaggttatcaataaggagtactgcata
gcaaggaagtcgacgaatcgataccgcgtctcccaaggtactaagttctaccaagtgcgc
ataaaaccagtggaagacgtcgttgagaaaacgaaatctcagatggcgaaaggcgacggg
gagtaa
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