Vespula pensylvanica (western yellowjacket): 122628143
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Entry
122628143 CDS
T07720
Name
(RefSeq) protein slit isoform X1
KO
K06839
slit 2
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vps00536
]
122628143
Glycosaminoglycan binding proteins [BR:
vps00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122628143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
Laminin_G_1
Laminin_G_2
LRR_9
LRR_1
hEGF
EGF_TEN
LRRCT
EGF_3
LRR_LRWD1
LRR_NXF1-5
LRR_6
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
122628143
NCBI-ProteinID:
XP_043666001
LinkDB
All DBs
Position
3:complement(5121388..5431396)
Genome browser
AA seq
1510 aa
AA seq
DB search
MIRAMTPSWSLRLLGVSCGSVVCAWGLLLILSVLGGGASHGTGTGIGSFGLGSLSGTMDD
LNAATCPWACSCGGQEVDCSHRGLTQIPGDLAALLLAEKLDLQGNNISVIFKTDFEDMAT
LHVLLLSNNQIHTIQRGAFQDLVGVEKLRLNNNQIRHLPDLLFSNMMNLKRLDLSHNQIA
TIGPKTLRGVSALRHLLLDNNVLTCIDESSIRELKDLEILMLNNNKLTTLGKEMLTGLSH
LRTLKLADNAFACDCHLTWLSRHLRTYSRLGQHTRCSSPAHLKDRSLADLQEHEFKCSGL
VERAGSECSAEPQCPHPCKCANGIVDCRENSLTKVPTHLPEDTTELRLEQNGITEIPPKA
FSPYRKLRRIDLSNNQIQKVASDAFHGLKSLESLVLYGNKISELPGGLFQGLSNLQLLLL
NANEISCIRTDLFRDLHNLTLLSLYDNNIKSLANGTFSNLRSIKTLHLAKNPFICDCNLR
WLSAYLHAHPIETSGAKCESPKRAQKRKIDSMRDDKFKCKGDEELLTKRAGECILPGACP
SPCSCNGATIDCSSKKLTSIPRDLPIYTSTLLLGNNELDKIKADGLFQKLPELQHLDLRK
NKISRIEASAFQGAHKLTDLLLSDNRLREVHNKMFTGLTNLKSLNLHGNAITCVMPEAFD
GLAHIRAINMQGNPLSCNCHLAWFAGWLRKRDMTGMTGRCHDPLRLKDAVIKDIPHHEFK
CNNDSVGCLGDDYCPPQCNCAGSVVRCSRAQLTEIPRGIPPETTELYLDENDIKTIQPER
LNHLRILTKLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKSLRIISL
HGNDISVIPEGAFEDLKSISHLALGSNPLYCDCSMRWLAEWVKKDFVEPGIAKCMDPPNM
RDKLLLTTPPDAFQCKTKQQPAEVLAKCDLCYTAPCQNGGLCEALPDRQFRCKCAPGYHG
DRCQHKIDACYGNPCKNSGTCKVLEEGRFSCDCAPGYEGLRCESNVDDCANNKCANNATC
VDLVQAYRCDCTPGFMGEYCGAKIPFCTKGHDPCENGGRCVDHQTHYSCECPIGFTGLNC
STNLDDCGDHMCQNGATCIDGINNYECKCAAEYTGRYCEIAPSTAMLYPQTSPCAHHDCQ
YGACFQPAPASAADYLCQCHPGYTGKRCEYLTSLSFVDNSSLVELEPLRTRPEANVTIIF
TTTQENGVLLYDGQNGEHIAVELFNGRVRVSYDVGNYPTSTMYSYEMVSDGKPHMAELLA
IKKNFTMRVDRGPARSIINEGPREYLKLITPMYVGGVTPEVANVAFSEFHLRNVTSFQGC
ISEMWINHKLVDFSNAAKRHRVTPGCASNEEEADEARDVIEAEGIAVGSNEDTLPQEHIP
PREHSDIVVSLPITGISDPCAGHECKKGSQCVPSAFGNDYSCRCQTGWYGRYCEKAPTCR
KEHTREYYSENGCRSRRPVKLAKCWGSCGNSCCLPRKTKRRKVRLICTDGMRYTKDVDLV
RKCTCTRKCY
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcgctatgacgccttcctggtcgttgcgtcttctcggcgtcagctgcggttcc
gtggtctgcgcctggggacttcttctgatactctcggttctcggtggtggtgcatctcac
ggtactgggaccggcatcggcagtttcggccttggaagtctctccggtactatggacgat
ctcaatgcggccacttgtccttgggcttgttcctgcggaggtcaagaggttgactgttct
catcgaggactcacgcagatacccggcgacctggctgcccttctactcgccgaaaaatta
gatcttcaagggaataatatctcggttatatttaagacggactttgaggacatggcgacg
cttcacgtactgctattatcgaacaatcagatccatactatccaaagaggggcgtttcaa
gatctggtcggtgtggagaaactgcgcctcaataacaatcaaattcgtcatctcccggat
ctcctcttcagcaacatgatgaacttaaaacggctagacctaagtcacaaccagatagcc
acgataggaccgaagacgttaagaggagtctctgctctcaggcaccttttactggataac
aacgtgttgacgtgcatcgacgaatcctcgataagagaattaaaggatctcgagatctta
atgctgaacaacaacaagctgacgacgctaggaaaggagatgctcactggtttgtcgcat
ttacggaccctcaaattagccgataatgctttcgcttgcgattgtcacttaacatggctt
tctcgacatttgagaacgtattctcgtctcggacagcatacgcgatgctcgtctccagct
catttgaaagatcgaagtctcgctgatctgcaggaacacgagttcaaatgctccggcttg
gtagaacgagcgggctcggaatgcagtgcggaaccgcaatgcccgcatccctgcaaatgc
gccaacggaatcgtcgattgccgagagaattccttgacgaaagtaccgacccatcttccg
gaggacaccacggaattacgtctggaacaaaatggtattacggagatcccacccaaggcc
ttttcaccgtatagaaaattacggagaatcgatctcagcaataatcagattcaaaaggtg
gcttctgatgcgttccacggtttgaaatccctcgaatctctagttctctatggaaataag
atcagtgaacttccaggtggtctctttcaaggactctccaatttgcaattactattgctc
aacgccaatgaaatttcttgcataaggaccgatcttttccgagatcttcacaacctcact
cttctttctttgtacgataataacatcaagtctctggcgaatggaaccttctcaaatcta
cggagtattaaaacactacatctagcaaaaaatcctttcatctgcgactgcaacttacga
tggttgagtgcctaccttcacgcacatccaatcgagacgtctggtgcaaaatgcgaatcg
ccgaagagggcgcagaagcggaagatcgattcgatgcgagacgacaagttcaaatgtaag
ggcgacgaagaacttttgacaaagagggctggtgaatgcattctacccggtgcatgcccc
tctccttgctcgtgcaacggagcaactatcgattgttccagtaagaagcttacctcaata
cccagagatctaccgatttacacctctactcttttgctaggcaacaacgagttggacaag
atcaaagcggacgggctattccaaaagcttccggaattacagcatctggatctaagaaag
aataaaatctcacgcatcgaagcgtccgcttttcaaggagcacacaagctcaccgaccta
ttgttgtccgacaatcggctgagagaagttcacaacaagatgttcactggtctgacgaat
ctgaagagcttgaatctccacggaaatgctataacatgcgtgatgcctgaggctttcgac
ggattggctcacattcgtgccatcaacatgcaaggcaatccactgtcgtgtaattgtcac
ctcgcatggttcgccggatggctcaggaaacgagatatgacaggaatgaccggtcgttgt
cacgatcccctgcgactcaaggacgccgtcattaaggatattccacatcacgaattcaaa
tgtaacaatgacagcgttggctgtctgggcgacgattactgtccaccccagtgcaattgt
gctggttcggtggtaaggtgttcaagggctcagcttacggagattccacgtgggattcca
ccggaaaccacggagctgtatttggacgagaacgacattaagaccatccaaccagagaga
ctgaaccacctgaggattctgaccaagctcgatttgagcaacaatcagatcggaatgttg
tccaacgatacctttaggaatctcacgaagctgtcgcatctaattatcagctacaacaaa
ttgcaatgtgtgcaaagaaacgctctcgcgggactgaagtctctgcgtataatttctctt
catggcaacgacatatcggtgattcccgagggtgctttcgaggatttaaaatcgatatct
catcttgctcttggttcgaaccctctctattgcgactgcagcatgcggtggttggctgaa
tgggtgaaaaaagattttgtcgagcctggtatagccaagtgtatggatccaccgaacatg
agagacaaacttcttctgacgacaccacccgacgcgtttcaatgtaaaaccaagcaacag
ccagccgaggtcctggccaagtgcgacctgtgttacaccgcgccatgccagaacggagga
ctctgcgaggcgcttccggatcggcagttccgttgcaagtgcgcgccaggatatcatggg
gaccggtgtcagcataaaattgacgcgtgctatggaaatccttgcaagaactccggaact
tgcaaagtattggaagaaggaagattcagttgcgactgtgcccccggatacgagggactc
cgatgcgagagtaacgtcgacgactgtgcgaacaacaagtgcgccaataacgcgacctgc
gtcgacctcgttcaggcctatcgatgtgactgcaccccaggattcatgggagaatactgc
ggagcgaaaatacccttttgcacaaaggggcacgatccctgcgagaacgggggtcgatgc
gtcgatcaccaaacccactacagctgcgaatgcccgatcggcttcaccggccttaattgt
tccaccaacctggatgactgcggtgatcatatgtgccagaacggtgctacttgcatcgac
ggcataaacaattacgagtgtaagtgcgcggcggagtatactggaaggtactgcgagatt
gcaccatcaacagccatgttatatccacaaacgagtccgtgtgcacatcacgattgtcag
tatggtgcctgcttccagccagctcctgcctccgccgcggactatctttgccagtgccac
cccggctataccggaaaacgatgcgagtacctgacgagtctgagcttcgtggacaatagc
tcgctggtcgagctagagccgctacgcacgaggcccgaggcaaatgtgaccatcattttc
acgaccacgcaggaaaacggggttttactctacgacggtcaaaacggggagcatatagcc
gtcgagttgttcaatggtcgcgtccgagtctcttacgacgttggaaattatcctacgtcg
acgatgtacagttacgagatggtctccgatggtaagccccacatggctgaacttttggcg
atcaagaagaacttcacgatgagggttgatcgcggtccagccaggagcatcataaacgag
ggcccgagggaatatttgaagctcatcacgccgatgtacgttggtggtgtcacacccgaa
gtcgccaacgtagccttctccgagtttcatttaaggaacgtcacgagcttccaaggctgc
atctccgagatgtggatcaaccacaagctggtggactttagcaatgccgccaaaaggcat
cgcgttactcctggatgtgcttctaacgaggaggaagctgatgaagcacgagacgtcatc
gaagccgaaggcattgctgtcggcagtaacgaagataccttgccacaggagcacattcct
cctcgcgaacattccgatatcgtcgtatcgctcccaatcacaggaatctctgatccctgt
gccggtcacgagtgtaagaagggctcgcaatgcgttccatcggcatttgggaatgattat
tcctgcagatgtcagaccggctggtacgggcgatattgcgagaaagcgccaacgtgtcgt
aaagagcacacgagggagtactacagcgaaaacggatgccgtagtcgacgacctgtgaaa
cttgccaaatgttggggaagttgcggcaattcgtgctgcttaccaagaaagaccaaacga
cgcaaggttcggctaatctgtacggatggcatgcggtacacgaaggacgtcgaccttgtt
cgtaagtgcacctgcactcgaaagtgctactag
DBGET
integrated database retrieval system
