Vespula pensylvanica (western yellowjacket): 122628225
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Entry
122628225 CDS
T07720
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122628225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vps03400
]
122628225
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122628225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
CEP63
Motif
Other DBs
NCBI-GeneID:
122628225
NCBI-ProteinID:
XP_043666220
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All DBs
Position
3:11217913..11229448
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AA seq
923 aa
AA seq
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MAVQPNQQFSMDPPSQVSFIRYFKNLPEKSSSTIRFFNRGDYYTLHGSDALFAAKEIFKT
TSVCKMLGAEPYKTEGVILNKSHFEAFIRDLLLVKQYRVEVYINQGSVKNQNWILEYKGS
PGNLSQFEDILFANNDIALGVSVIAVKLGIEGKSRIVGLSCLDTVATSFSVCEFQDSESF
SNLETLIVTLNPKECLLIQGEGSYEFDALKQVIERSNVLVTLRKKSEFSNDSVVQDLNTL
IKFKKGQQENAQSLPEVNLTLAMSATSALIKYLDLTSDEGNIHQFSIEQIKQSRYLKLDT
AAIKALNIEPRIDVSSNLNGNVPASILTLLDKCRTSQGHRLIAQWIRQPLKDLALIKERH
DIVEILVKNNELRSALSEDHLRRIPDLQQLAKKLCRKKAHLQDCYKIYTSVSHLPRLIQQ
LSDASDITALKELIINPLKELVNDMDKFQQMIEQTIDLDAAEKGDFLVRPDFDDELKELK
EEMDEMEEKVQSQLSKVADDLGLESGKSLKLETNQQFGYYFRITLKEEKILRNKKYYVIL
DSNKSGVRFRNNKLSELNDEYIAARDKYTTQQKTVVTEIIEIAAGYTSPIKSIGDVIACL
DVLVAFALAAANAHKTYVRPEMLSSEHGEFNLVQVRHPCLEIQEGVDYIANDVYFKRDEV
HCYIITGPNMGGKSTYIRSAGVTALMAHIGSFVPCDKATISLLDCILARIGADDSQLKGL
STFMMEMIETAAILRTATSNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKEIKSYCLFAT
HFHEITRLSEEIPTVKNQHVTALIQNDKLTLLYKVKPGVCDQSFGIHVAKMANFPDNVIE
FAKRKQTELEDYQGTVFEGSDCPQKKRKIIKEADGLIAEFLNKCKTLDKSLTNAQLKDKI
LKYKTEICSHKNPYIEALLSAGS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaaccaaatcagcaatttagtatggatccaccttcccaagtcagtttcatt
agatatttcaagaatcttccagaaaaatcaagttccactatacgattttttaacagaggt
gattattatacattacatggaagtgatgctttatttgctgccaaagaaatttttaaaaca
acatctgtttgtaaaatgcttggtgctgaaccctataaaactgaaggtgttatattaaat
aaaagtcattttgaggcatttatacgtgacttactattagtaaaacaatatagagtggaa
gtttacatcaatcaaggatcagtaaagaaccaaaactggatattagaatataaaggatca
cctggtaatttgtcacaatttgaagatatattatttgctaacaatgatatagcactggga
gtgtcagtaatcgcagtaaagttaggaatagaaggaaaatccagaattgtaggtttaagc
tgtcttgatactgtagcaacttctttctcagtttgtgaattccaagatagtgaatctttc
tcaaatttagaaacacttattgttacacttaatccaaaagaatgtctactaatccaaggg
gaaggtagttatgagtttgatgctttaaaacaggtaatagagagaagtaatgttttagtt
actttaagaaaaaagagcgaattttctaatgattcagttgtacaagatttaaatacatta
attaaatttaaaaaaggccagcaagaaaatgctcaatcattacctgaagtaaatttaaca
ttagctatgtcagctacatctgcattaattaaatatttggatctgacatctgatgaggga
aatattcatcaatttagtatagaacaaataaaacaatcacgctatttaaaattggacaca
gcagctataaaggctcttaatattgagcctcgtatagacgtatcttctaatttaaatgga
aatgtacctgcaagtattttaactttattggacaaatgtagaacttcacaaggtcataga
ttaattgcacaatggattagacagcctcttaaagatttggcacttataaaagaaagacat
gatattgtagaaatattagttaaaaacaatgaattgagatctgctcttagtgaagatcat
ctaagacgaataccagacttacagcaattagctaaaaaattatgtagaaaaaaagctcat
cttcaagactgttacaaaatttatacgagtgtgtctcatttgccaagattgatacaacaa
ctttctgatgcttctgatataacagcattaaaagaattgattataaatccattgaaagaa
cttgtcaatgatatggataaatttcaacaaatgatcgaacagactattgatttagacgca
gcggaaaaaggagattttttagtacgtcccgattttgacgatgaattgaaagaactaaag
gaagaaatggatgaaatggaagaaaaagtccaatcccaattaagtaaagtagctgatgac
ttgggtttagaatcaggaaaatcattaaaattggaaactaatcaacagttcggttattat
tttcgaataacgttaaaggaggaaaagatactaagaaataaaaaatattatgttatatta
gactctaataaaagtggtgtaagatttagaaataataaattaagcgaattgaatgatgaa
tatattgctgctagagacaagtatacaactcaacaaaaaactgttgttacagaaatcatt
gaaattgcagctggatataccagtccgattaaaagtattggagacgttatcgcgtgtctt
gatgtcctcgtggcatttgccttagctgcagcaaacgcacataaaacatatgtacgccca
gaaatgctttctagcgagcatggtgaatttaatcttgttcaagtgagacatccttgttta
gaaatacaagaaggcgtagattatatcgctaatgacgtatatttcaaaagagatgaggtt
cattgttatattataactggtccaaatatgggtggtaaaagtacgtatatacgttctgct
ggtgtaactgcattaatggcacacattggaagttttgtcccttgtgataaagcaacgata
tctttattggattgtatattagcaagaattggagctgatgattcacaattaaaaggtctc
tcaacgtttatgatggaaatgatagaaacagctgctattttaaggacagcaacgtctaat
tcacttgtcattattgacgaacttggtagaggtacatcaacgtatgaaggatgtggtatt
gcttggtccatagcagaacatttagcaaaagaaattaaatcttattgcttatttgcaaca
cattttcacgaaattacgagactttctgaagaaatacctacagttaaaaatcaacacgta
acagctcttattcaaaacgataaacttactttactttataaagtaaagcctggtgtttgt
gatcaaagctttggtattcatgttgctaagatggctaattttccagataacgtaatagag
tttgctaaacgaaaacaaacagaattagaggattatcagggaacagtttttgaaggatct
gattgtccacaaaaaaagcgaaaaattataaaggaagctgatggtttgatagccgaattt
ctcaataaatgcaaaacactagataaatctttaacaaatgcacagttgaaagataagatc
ttaaaatataaaacagaaatttgttctcataaaaatccatatattgaagcattattatca
gcaggttcctaa
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