Vespula pensylvanica (western yellowjacket): 122628277
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Entry
122628277 CDS
T07720
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122628277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vps02000
]
122628277
Transporters [BR:
vps02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
122628277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
AAA_30
AAA_29
RsgA_GTPase
TsaE
MMR_HSR1
RIC3
Motif
Other DBs
NCBI-GeneID:
122628277
NCBI-ProteinID:
XP_043666339
LinkDB
All DBs
Position
4:7419097..7442308
Genome browser
AA seq
1733 aa
AA seq
DB search
MARIRGRRTRHEIARTSVYRRMDSCKVYWSQLRAMLVRNILLKKREKRKTIAEIFLPLYT
LGILIVIKVLIPNPNYPAMTTQGHKSNIFEFFNGYENNTIAVVPNSTETLNFLNSMNTFW
LSMWDFPEKLPLNFMIFDSKDDLQAAYWRDPYSVPLAVIFEDSQPITQRLLYEIRTNPSY
TSPPSPLELYSAPVTCRKDTNHWMGGVLSIKTGGSCPVDNYLHSGFLALQMLMDITKIKL
DTQHNYITIPHIKLEMFPKEAFTADWMLAFRVIIPLYMVLALSQFITYLLILIVGEKEKK
IKEGMKIMGLKDSVFWMSWFIIYGVFVLLLSAVGVVLLFTLQMFQHTHFLPIFLLVVLYS
ISIVMFAFMITPFFDNSRTAGVLGNFAVTILSLMYFIQVFINDSSSVSFWLVSLLSPTGV
ALAMDKALVLDLQGQGVNFDNLWCGPGIPFGGSLIMMTLDIFLYGYLAYYLDSVIPSEYG
TKRLPWFCFTPGFWCQRKVQRVPSSNGESNSFIPGEETHRDVEPVIREMKGREAIRIVDL
FKSYQKCRKPEIKAVNGINLTIYEGQITAILGHNGAGKTTLFNILTGLTSPTAGTALIFG
YDIRDSNDMQMIRSMTGVCPQHDILFDLLTPREHLEFFAAVRCIPKSVIDYEVNKTLKDI
DLVEKADTFAKYLSGGQKRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSLLQSRRH
GKVILLTTHFMDEADILSDRKAVISKGKLRCCGTSLFLKNKFGIGYHLTLVLEGNAREHA
ITRLVSSHVTKAEKARRHGRELSFILPHNSVENFASLFSAIEHEIKTRSSRLGISSYGVS
MTTLEEVFLHLEKDEETECTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVIVQND
GQAKGAGDLPDGVHNDRNPPILGLGLDPIKIRPNFLQILYAMLRLRILRLFRNIQLLYFT
IVAPLALIILGLYINSVQTVDIKMQSLELNSDTYGNRTKIVYFNNTNVDITSLIDSISHD
VKHIDEYDGNYVNLLKIGPHIAAFNINEYNSLNMDLTIIYNDTMQHSLPILLNVLLNTYY
RLIARKDDVPQIEIKTHPFQQTSQPQEFNIGAASSALFIGMDFVLLPITLAIDMVYDREI
KAKNQLRINGLSFPMYFLTYFIVLVGLMTFICLCIVGIIFLFDVPSLQEPPALITLGTLL
MLYCPSSILFSTCWSYIFDKMDSAQSILPNIATFLGLIPFLLVMFLDMLGVGGTAAFALH
VVFSLLNTMYVPYAAVYYVDRVHLMCSINAACQHLTMSDYLTTEIILMAVGVLLHCPLWF
FVLLLLDIKKSGGNISDTFKHFLRNDVSIGEEVMENSDVGDHEDADVKTERQRVFNLITS
PSIQQSPVVLVQNLRKEYHQRETVSCSCCNRREEGSMQRKVAVRNLSLAVEPGEVFGLLG
HNGAGKTTTMRIIIAEEAATRGRVQIDGYNIHSQMAEAFRQMGYCPQHDAQWKNITVREH
LECYAAIRGVPSQEIKKIVDLYLSSLQIHEHADKQIQECSGGTRRKLSFAMAMVGGPKVV
LMDEPSTGMDPRSKRFLWDTILASFQGNRGAILTTHSMEEADALCSRVGIMVKGELRCIG
STQHLKNLYGAGYTLEMKLFGGDCTPTMPSGDKLSALKQFVAGLFPDATLEESFADRLVF
AVPQQAVNSLAECFMQLEKAKQELDIEEYTFSQTTLEQVFLKFSHYDESNSGE
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaatccgagggagaaggacaagacacgaaatagcaaggacgagtgtatatcgc
aggatggattcgtgcaaggtttactggtctcagctacgagctatgctcgtgagaaatatt
cttctgaagaaacgtgaaaagcggaagaccatcgcggagatcttcctgcctctttatact
ctagggattctcatagtgataaaggtattgatacctaatccaaattatcccgcgatgacg
acgcaggggcataaatcgaatatattcgaatttttcaatggttatgagaacaatacgatt
gctgtggtacctaattcgacggaaactctcaactttttaaattcgatgaacaccttttgg
ctgtccatgtgggattttcctgagaagttacctttgaatttcatgatattcgattcgaag
gatgatctacaagcagcttactggagagatccatatagtgtacctctggctgtgatcttt
gaagactctcaaccgatcactcaacgtcttctatacgagattagaacaaatccttcgtat
acatcacctccttcgcctcttgaactctattccgctccggttacttgccggaaggatacc
aaccactggatgggaggcgttctatcaataaaaactggcggatcatgtcccgtggataac
tacttgcattctggcttcctagcgttacaaatgctaatggatattacgaagataaagctt
gacacgcaacacaactacataaccattccgcatataaaattagaaatgtttccgaaagaa
gcgttcacagctgattggatgctggcttttagagtcattattcctttgtatatggtctta
gcactttcacagttcattacttatctcttgatactaattgtcggtgaaaaagagaagaag
attaaagaaggaatgaaaattatgggcctgaaggattctgtgttttggatgtcttggttt
attatctacggcgtctttgtcttgttactttccgccgttggagtggtattactcttcact
ctacaaatgtttcagcatactcactttttaccgatatttcttttggttgtactttatagt
atttccatcgtcatgtttgccttcatgataacaccattctttgataattctcgtactgcc
ggtgtccttggaaactttgcagtaacgatactaagtttgatgtacttcattcaagtcttt
ataaacgattctagctcggtctcattttggctggtatcacttttaagtccaacgggtgtt
gcattggctatggataaggccttggtcctggatttacagggacaaggagtgaatttcgat
aatctttggtgtggtcctggtatacctttcggtggaagtctcattatgatgactttagac
atattcttgtatggttacttagcttattatttggactcggtaataccaagcgagtatggc
acgaagagattaccgtggttctgttttacacctggattttggtgtcaacgtaaagttcaa
agggtaccgtcgtctaacggcgaatcaaattcttttatacccggtgaggaaacacataga
gacgtggaaccagtcattcgtgagatgaagggaagggaagcaattagaatcgtagatttg
tttaaatcttatcagaaatgtcgtaagcctgaaataaaggcagttaatggtatcaaccta
acgatttatgagggacaaataacagcgatattgggacataacggggctggtaaaaccacg
ttgtttaacatactcaccggattgacatcgccaacagccggtactgctttgatttttgga
tatgacatacgagattcaaacgatatgcagatgatcagaagtatgacaggtgtatgccct
cagcatgacattctgtttgatcttttaacccccagagaacatcttgaattttttgccgct
gtacgttgtattccaaaatcagtaatcgattatgaggtaaataaaacgttaaaagacata
gacctggttgaaaaagcagatacttttgcaaaatacttaagcggtggtcagaagagaaag
ctctcagtaggtatcgccattatcggtgatcctaagatcattatccttgatgagcctaca
gctggagtggatccatactcgagaagacaaatgtggtctttactgcaatccagaagacac
ggtaaagtcattcttttaacgactcacttcatggacgaagcagatatattatctgacagg
aaggcagttataagtaaagggaaattgagatgttgcggtacttcattgttcttaaaaaat
aaattcggtatcggttatcatttaactctcgtactcgaaggcaacgcgagggaacatgcg
ataacacgattagtatcgtctcatgtgacgaaagccgaaaaagcaagacgccacggtcga
gaattgagcttcatcttgcctcacaattccgtggaaaatttcgcctcactattttcggct
atcgagcatgaaatcaaaacgagatcgagtaggttgggtattagtagttacggagtatct
atgacgaccctggaagaagtgtttttacatctggaaaaagacgaggaaacggaatgtacc
atggacaatctgtcaaagaaaatggttcgtaatcgtgcacttagtagatcgttgtccttg
cagtcgaaaagtacatcgtaccagagtttacagaacgaaggtgttatcgttcaaaatgat
ggtcaagcgaaaggagcaggtgatctaccagatggagttcacaatgataggaatcctcct
attctcggccttggcttagaccccatcaaaattcggcctaacttccttcaaattctttac
gccatgcttcgcctaaggatactcaggctgtttagaaacattcaactactttacttcacc
atcgttgctcctcttgctctaataatccttggtctctatataaacagtgttcaaactgtc
gacattaagatgcagtctcttgaacttaatagtgacacctatggcaataggactaaaatt
gtatatttcaataataccaatgttgatataacgtctttgatagacagtataagtcacgat
gtaaagcatatcgatgaatacgatggaaactacgttaatttgttaaaaatcggaccgcac
atagcagcatttaatatcaatgaatataactctctaaatatggatttaacgatcatatat
aacgatacgatgcaacattctctacctatcttattgaatgtactgttaaatacttattat
agattgatagccagaaaggatgacgttccgcaaattgaaataaaaacacatccgtttcaa
cagacgtcacagccacaagaatttaatataggtgctgccagttcagcgttatttatagga
atggattttgttttattaccgatcactttggcaatcgatatggtttatgatcgagaaatt
aaagcgaagaatcaattgcgcatcaacggcctgtcatttcctatgtacttccttacttat
tttatcgtcctcgtcggcctgatgacatttatttgtttatgtatcgttggtattatattt
ctcttcgacgtgccttcgcttcaagaaccgccagcactcattacccttggtacccttttg
atgttatactgcccatcgtccattcttttctcaacatgttggagttacatttttgataag
atggattccgcacagagtattttacccaatattgcaacgttcttaggactgatacctttt
ttgcttgtcatgttcctagatatgctaggcgttggtggtacagcagcgttcgctttgcac
gtggtgttttctctgttgaataccatgtacgtgccctacgcagctgtatactatgtagat
cgcgtccatttaatgtgctctattaatgctgcctgccaacatttaacaatgtcggattat
cttaccacggagatcatattgatggctgttggtgtattgttacattgtccattatggttc
ttcgtattgctcttattggacatcaagaaaagcggtggaaacattagcgataccttcaag
cacttcctgagaaatgatgtctctatcggggaggaggtaatggaaaattcggatgtaggt
gatcacgaagatgctgacgtaaaaactgaaagacagagagtgttcaatcttattacgtca
ccttccattcagcaatcaccagtggtattggtacagaatctacggaaagaatatcatcaa
cgagaaacagtttcttgtagctgttgtaacagaagagaggaagggtcaatgcaacgaaaa
gtcgccgtacgaaatttatcattggccgttgaaccaggcgaagtatttggacttttaggt
cataatggtgctggcaaaactactacgatgaggattattatcgcagaggaagcagcgaca
cgtggtagagtacaaattgatggatacaatattcactctcaaatggcagaagcattcaga
caaatgggatattgtccgcaacacgatgctcaatggaagaatattactgtacgagaacat
ttggaatgttacgcagctattcgtggtgtaccttcgcaagagattaagaaaatcgtagat
ctctatctatccagtcttcagattcatgaacatgccgataaacaaattcaagaatgctca
ggtggtactagaagaaaacttagcttcgcaatggcgatggttggaggaccaaaggttgtt
ttaatggatgaacctagtacgggtatggatcctcgatcaaagagattcctatgggatacc
atccttgctagtttccagggtaaccgaggagcaattcttacaactcactcaatggaagaa
gccgatgcactgtgttccagagtcggtataatggtcaaaggtgaattaagatgcataggt
tcgacgcaacatttgaaaaatctgtatggtgctgggtacactttagagatgaaacttttt
ggtggcgattgtactccaactatgccttccggtgataaattatctgcattaaagcaattc
gttgctggtctctttcctgatgcaacgttagaagaaagctttgcagacagattggtcttc
gccgttcctcaacaggcagtgaactcgctggccgagtgttttatgcagttggagaaggcc
aaacaggaactggacatcgaggagtatactttcagtcaaactaccctggaacaggtgttt
ctcaagttctctcattacgacgagagcaatagtggtgaatga
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integrated database retrieval system
