Vespula pensylvanica (western yellowjacket): 122628296
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Entry
122628296 CDS
T07720
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122628296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122628296
Spliceosome [BR:
vps03041
]
Complex B
Other components
Prp19-related factors
122628296
Complex C
122628296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_occluded
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
RRM_3
zf-CCCH_12
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
122628296
NCBI-ProteinID:
XP_043666385
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Position
4:6843788..6845410
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AA seq
415 aa
AA seq
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MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDATTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTISAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMMPPMMIPPP
PVAPQFMFPPQMAAAAAAAAATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcaaaaaccacgaatacatataatagacaaaattgggaagatgcggaattt
cccatattatgtcaaacttgtttaggagataatccatatattcggatgaccaaagaaaaa
tatggaaaagaatgcaaaatctgcatgcgtccatttacagtattcagatggtgtccggga
gcaagaatgcgatttaaaaagactgaagtttgtcaaacttgcagtcgacttaaaaatgta
tgtcaaacatgtttacttgatttagaatatggattacctattcaagtacgcgatgctgca
ttaaaaataaaggatgatttacctcggtctgatgtaaacaaagaatattatgtacaaaac
atagataatgaaataggaaaaatagatgcaacaacgccagctggagctgttggtaaatct
gctgctgctagtgatctattaatgaaactggctagaacaagtccatactataagaggaac
aggccgcatatttgttctttctgggtaaaaggtgaatgtaaaagaggggaggagtgtcct
tatcgtcatgaaaaaccaacagatccggatgatccattagcagatcaaaacatcaaagat
cgctattatggagttaatgaccctgtggcagataaattaatgcgaagagcagcagcaatg
cctaaattagatccaccagaggataaatctataactactttgtacattggaaacttgggt
gatgttttaacagagaaacaattacgagatcatttctaccaatatggtgaaatacgttct
gtgactatggtcccacggcaacagtgtgccttcattcaatacacacaaagaagcgcagct
gaagcagcagcagaaaggacattcaataaattaatattaggtggaaggagattaacaata
aaatggggacgttctcagggcagacaaactatttctgcagcagaagcaactagagaaatt
ttggaaccagtacctggtttacctggtgctttaccacctccaccagaaagcatgggaaat
aatttctttaatctacaaacaactcctggtatgatgccaccaatgatgataccaccgcca
ccagtagcaccacaattcatgtttccacctcaaatggctgctgctgctgctgcagcagct
gcaactcctatttttccaccaggcacaacgcctatacattatcccagtcaagatccatct
agaatgggtgcatctcagggtattggaaaaccatggcctgaagaataa
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