Vespula pensylvanica (western yellowjacket): 122628412
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Entry
122628412 CDS
T07720
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vps03009
]
122628412
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122628412
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
Helicases
122628412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
122628412
NCBI-ProteinID:
XP_043666621
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All DBs
Position
4:1908468..1913098
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AA seq
775 aa
AA seq
DB search
MKDTEVIGFGGTEELNENEEDEDISDIKKKASKKSGGFQSMALSYPILKGILKRGYKIPT
PIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKTRQAKTGARALILSPTRELAM
QTLKFIKELGKFIGLKAAVILGGDSMDNQFSIIHGNPDIIVATPGRFLHICVEMDLRLNS
VEYVVFDEADRLFEMGFGEQIHEIVNRLPETRQTLLFSATLPKILVEFTKAGLSDPILIR
LDVESKLPEELSLSFIICRPEEKLAVLLALLKNVIANDSQTVIFAATMHHVEYLHQILDK
AGISNTFIYSNLDPSARKINAAKFQMGKVKTLIVTDVAARGIDIPHLDNVINFNFPAKCK
LFVHRVGRCARAGRTGTAYNIVTPDEYPYLLDLHLFLGRSLNIVPLSSTSNDMEYIIGKM
PQAMIEEELAELINWHDSSTDLKNMEKVCDNAYERYIKSRPAASSESVKRMKELNINSAG
IIPEYSNINPATMDILTKMKQYRPQGTIFEIGKKTCSLDYKVMKEKRAFHKDNIFNFHKK
METLEAKKEEAAKNMSQKTTLPKSNENEINEAFNKVIMPKKRNIEDLYKNTKKKKRLATK
DEEFYIPYSAPDKHTEDGLAVNNFMTEAEKAQLDLTADNEESLRLQTQLKKWDRKKKKMI
TINNDPKAGKIRTESGAWIPATYKTNRYTQWKEKSKVDAMADEDSEEESPQLQKLQTNVN
THWARHNQKIKEKVKAKSELKRPEQILKARKLLERKKRRNGRKGRKGQKKGGKSR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatacagaggttattggttttggaggaacagaagaacttaatgaaaatgaagaa
gatgaagacatttcggacatcaagaaaaaagcttctaagaagtcaggtggatttcaatct
atggctcttagctatcctattttgaaaggtatattaaaacgtggttataaaattccaaca
ccaatacagaggaagacaatccctttagctcttgaaggaagagatattgtagcaatggcc
aggacgggtagtggaaagacagcttgttttttaatcccattgtttgaaaaactcaagaca
agacaagctaaaactggtgcacgtgccttaattctttcacctacacgtgaattagcaatg
caaacattgaaatttataaaagagttaggaaaatttataggattaaaagctgcagtgata
ttgggaggagatagtatggataatcaattcagtattattcatggaaatcctgatattatt
gttgctacaccaggcagatttcttcatatatgtgttgaaatggatttacgtttaaacagt
gtagagtatgttgtattcgatgaggctgacagattgtttgaaatgggttttggtgaacaa
attcatgagatagttaatagattaccagagacaagacaaactctactgttctctgctaca
ttacctaagattttagtagagtttactaaagcaggtttaagcgatcctatcttaatacga
ttagatgttgaaagtaaattaccggaagaattaagtttatcatttattatttgtcgtcct
gaagagaaattggctgtgcttctagctctattaaagaatgtcattgcaaatgattcacaa
actgtaatatttgctgcaactatgcatcatgtagaatacctccatcagatactagacaaa
gcaggaatttcaaatacatttatttattcaaatttggatccatctgcacgtaaaataaat
gctgctaaatttcaaatgggcaaagtaaagactttaattgttactgatgttgctgctcgt
ggtatagatatacctcatttagataatgttattaattttaatttcccagctaaatgtaaa
ttgttcgtgcacagagtaggtcgttgtgcacgtgctggtcgaactggaactgcttataat
attgtaactcctgatgagtatccatatctcctagatttacatctatttcttggtcgttca
ttaaatatagttcctttgtctagtacaagtaatgatatggagtatataataggaaaaatg
cctcaagctatgatagaagaagaacttgcagaattaataaattggcatgattcatctact
gatctgaaaaacatggaaaaagtttgtgacaatgcttatgaacgttatatcaaatctcgg
ccagcagcatcatcggaaagcgttaaacgaatgaaagaattgaatattaattcagctggt
ataatacctgaatattctaatattaatcctgccacaatggatatattaactaaaatgaaa
cagtacagacctcaaggaacaatattcgaaatcggcaaaaaaacatgttcattggattat
aaagtgatgaaagaaaaacgagcatttcataaagataatattttcaactttcataaaaaa
atggagacattagaagcaaagaaggaggaggctgcaaaaaatatgtctcaaaaaactaca
ttaccaaaaagtaatgagaatgaaattaatgaagcatttaataaagtgataatgccaaag
aaacgaaatatagaagatttgtataagaatactaagaaaaagaaacgtttggctactaag
gatgaagaattttatattccgtattctgcaccagataaacatacagaagatggattggcg
gtaaataatttcatgacagaggcagaaaaagcacaattggatttaacagcagacaatgaa
gaatctttacggctacaaacgcaacttaagaaatgggatcgtaaaaagaaaaaaatgatt
actattaataacgatccaaaagctggtaaaatacgtaccgaatctggagcatggattcct
gctacatacaaaacaaatcgttacacgcaatggaaggagaagagtaaagtcgatgctatg
gccgacgaagatagcgaagaagaatcaccacaattgcaaaaattgcaaacaaacgtcaat
acacattgggcgcgtcataatcaaaagatcaaggagaaggtgaaggccaagtcagagttg
aagagaccggaacaaattttgaaagctcgtaaattgttggaaaggaagaaacgacgaaat
ggtagaaagggccggaaaggtcagaaaaaagggggaaagtctcgttaa
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