Vespula pensylvanica (western yellowjacket): 122628901
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Entry
122628901 CDS
T07720
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04145
Phagosome
vps04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122628901
09142 Cell motility
04814 Motor proteins
122628901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vps03036
]
122628901
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vps04812
]
122628901
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122628901
Cytoskeleton proteins [BR:
vps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122628901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Dynein_IC2
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
122628901
NCBI-ProteinID:
XP_043667673
LinkDB
All DBs
Position
4:complement(3491291..3503769)
Genome browser
AA seq
723 aa
AA seq
DB search
MMSDRKAELERKKAKLQAIREEKERRRREKEQKDVEEATVRAAGADKDHRKEIDAMLSSL
GMAPVSDVLSSLSSMNSLTPEQSANATPDASLQPSSINSTQSTGRRKPRELTIVSVANTN
IPPKEPVVYSKQTQTVQTTHTSHDGLSKSSSEYTIYSSCSTTTPTHSCSAGYFETDWWRP
RKGGSAPNYLSHAFDYYDEYNLNPGLEWEDEFTVLTFDDSQAEDEENSLPHLDSFQSKLP
PGILPHGLPQVKEVQPAVTQVEQEKEKEKPKKEVREFSEEEKQMIILSEDFQRFLDRTSR
IVERALGESIDIYTDYTGTMDGEDGLDEKSHQQLWLNRSFFCERWSRNRCVTSMDWSPQF
PELLAASYNNNDDTPNDPDGVCLVWNTKFKKATPEFIFHCQSPVMSTTFAKFHPNLILGG
TYSGQIVLWDNRVQKRTPVQRTPLSASAHTHPVYCLTVVGTQNAHNLISISTDGKLCSWS
LDMLSQPQETLILYLKQSKTIAATCLAFPHGDVNNFVVGSEDGTVYGDCRHGTKAGVVEM
FEGHQGPVTGISTHAVQGGIDFSHLFLTSSIDWTIKLWSLKEMKPLYSFEHNGDYVYDVA
WSPTHPALFAAVDDSGRLDLWNLNQDTEVPAASVIVDGNPALNRVSWTPSGLHVTVGDDT
GKIWVYDVAEHLAYPRSDEWNKFLYTQQDLKNNKADEELDRLNLSSGPSSLTSLTSISSC
PLR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatagaaaagctgaactggaaaggaaaaaggcaaagcttcaagctattaga
gaggaaaaagaaaggcgaagaagagaaaaagagcaaaaagatgttgaagaagctacggta
cgtgcagcaggtgctgacaaagatcatcgtaaagaaattgatgctatgctttcttctttg
ggaatggcaccagtatcagatgtattgtccagtttatctagcatgaattctttgacacca
gagcaaagtgctaatgctacaccagatgcaagtttgcaaccatctagcatcaattcaaca
cagagtactgggcgaaggaaaccaagagaactgactattgtttctgttgctaataccaat
attccaccaaaggagcctgttgtctatagtaaacaaactcaaacagttcaaacaacacat
acatctcatgacggactgtccaaatcttcttccgaatacaccatctactcctcctgttca
acaacaacaccaactcactcttgctccgcaggctactttgagactgactggtggcgtccc
aggaaaggtgggtctgcaccaaactacctatctcatgcattcgactattacgacgagtac
aatctaaatccaggtttagaatgggaggacgaatttacagttttgacatttgatgattcc
caagccgaagatgaagagaacagcttgccacacttggacagcttccaaagcaagcttcca
cctggaattcttccacatggtttgccgcaggttaaagaggttcagcctgctgttacacag
gtagaacaagaaaaggagaaagaaaaacctaagaaagaagttcgcgagttcagcgaggaa
gaaaaacagatgatcatactctcggaagactttcaacgattcctcgatcgtactagtagg
attgtggaaagagcattgggcgaatcgattgacatttataccgattataccggtacaatg
gatggcgaggatggattggacgaaaaaagccatcaacaattatggttaaatcgttccttc
ttctgtgaacgatggtcgcgtaatcgttgcgtcacttcgatggattggtccccgcagttt
ccagaacttcttgcggcctcatacaacaacaatgacgataccccaaatgatcccgatggt
gtatgtttggtttggaacacgaaatttaagaaagccactccagaattcatcttccattgt
caatcaccggtgatgtcgaccacttttgcgaaattccatccaaatttgattttgggtggt
acttattctggtcaaatagtactctgggataatcgcgtacaaaagagaacgccagtacaa
agaacaccattgtcagctagcgctcatacccatccggtatattgcctaactgttgttgga
acgcaaaacgcacataatttgatcagcatttcgacggatggtaaattatgctcttggagt
ttagatatgttgtctcaaccacaggaaacgttgattctatacttgaaacagtctaaaaca
atagcggctacttgcttagcttttcctcatggcgatgtgaataattttgttgttggtagt
gaggatggaaccgtatacggcgactgccgacatggtacaaaagctggtgtagttgaaatg
tttgaaggtcatcaaggaccggtgactggtattagtacacatgccgttcaaggtggaatt
gacttctctcatttattcttaacctcctctatcgattggaccatcaaattatggagtctt
aaagaaatgaaacccctttattctttcgaacataatggagattacgtgtacgatgttgca
tggtcaccaactcatccagcattgtttgcagctgttgacgattcaggtagattagatctc
tggaatttaaatcaggacactgaagtacccgctgctagtgttatcgtcgatggaaatccc
gcgttaaatagagtctcttggacaccgagcggtttacacgttacggtcggagatgacact
ggtaaaatttgggtttacgatgtcgcagagcatttggcatatccgagaagcgatgaatgg
aataaattcttgtatacacaacaagatttaaagaataacaaagcggacgaggaattagac
aggctcaatcttagttccggaccgtcttcgttaacatctttaacctctatttcatcgtgt
ccgcttagataa
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