Vespula pensylvanica (western yellowjacket): 122628990
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Entry
122628990 CDS
T07720
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vps03037
]
122628990
Cilium and associated proteins [BR:
vps03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122628990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
ERM_helical
PUMA_CC
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
122628990
NCBI-ProteinID:
XP_043667881
LinkDB
All DBs
Position
4:7933036..7949099
Genome browser
AA seq
1970 aa
AA seq
DB search
MPRTLSKNTGQLTPKGPMERRRPPLLKGTSKIKESERKTSKMDPTYSTISCPGDDEETLS
PEALVRQNYELRHRLEEEAASYKRRLDTYRQAQQHQAALVSRLQAKVLQYKQRCSELESV
MAETAAIDNSKLSTQPQGTSALDVAHQTLREMREEQIHDLDTALKKLAEERKKCEKLLEL
NTSLKDQLEETSQTNEALTNDLQKLSNDWDILREELTIKEEEWKEEEQAFNDYYTSEHNR
LLNLWRDVVSVKRLFADIKSSTDRDLSKLNNQITSATNDIVSTCNNTSIFMKMQTSIIQP
SVSQQIQESQMVMDVKSEMGLLKQQYDVAQNEIRMKDDRINQLIREIHALEERCGEAEAQ
TNNITRMQEDIEILQNALRDIAHTVIQDAETRDTESTQPPPHVHLSPTGPIPQRSPRRGA
RANTIPAFAESTISAVQAALHKYQLTIHDLQVKLQTHKEQLSSFRKQSENAEENVRTLQV
KITELVGELDTTRSQCTQLVEEKEVLHKNLDTIKMEKSVLEKNRMEINAMVETLNADYEK
IQKANNKLQKICDSLEDDKLYLQGELERLSKDAELRELSLRSEENRCSKMREELLTLQEE
LNKTYLTKDMLEQQKLETDALISQIEKSKGDIELELEHVLLEKSDIKEMLLKLESVCSNH
EQDKQRLQEELKKTIEEKNKLANQCADQQGDLGSLRKELLQAEQTRLDLESEKVTLNEKV
KFLEIEKEKIEMELSQVTRERSDLSNQLSVLARKKETLNEELMRIRQRLEQANEMNSRIN
RSLEDLVKDNEEKQVLLETNEKELQRLQEQIASVRSEKETLEGVLYDTQTNLESTHIKKS
QLEKEQKELLIKQESLKGHIGRLTKDLENSQKQSQDIKQALAQQCCDQEANFQQAIFNLK
KQNEENVKKLNEEKEQLKITLEKRLQQSLLQLGGEKNDEINQLQQRVEELQQHIENLCQQ
HEEVLLRAENDKQQALLIAHHDQQALMEKLENALRDLEEEKGNLERLKRDTSIRSEQDRN
NLNQLRDNLNRFKTKLDETKLKGDEDRLKLELKIEELLKERESVQKESEELRVQLHMAED
KLDGLHNQLHETVRKLKDTENVNDTLRKELVDVRRQLTDSTFEKEKYNTSNKELREHIKR
IEGEKREQGRALEETYQKIAALDDAKTAMEAERSRLQVQLRDMERDMLQLQQQFRLTQDE
LQKSNENNAQAQNNEKELQARLANETEERERLQLQLHQVKKQVLDLDNSLEVTRQELGKL
RSRADEEDERWRSREQELLVRLEDSRCRERKLEDQKHNLEVCLADASQQIQELKARLGGS
EGRVRALDAQLSQLEVAKKEVEQKLSSIGLTLRRIAGIQMDGSVNMPFKLMSPSRRWSPA
RGHEHGDSSKDIVIDVDPEAVRRGMRSLMQQVAQIERERDDYKTELCSLKTQLSEYQENQ
TKVDERLNNLLANMRTIQEEKNSLEARMSQRETSHQSQMDMLQQKTDECDQLREKVLNLE
MIVNSDTEEKNLYEEKLEKMKQTLNRMENERRNLQEELNKSEARATKLELQRMSLEGDLQ
RLQMMLQEREANIQKLQDRCETQNRTTAGLEERCASLKSTIEQLNLALEKSFNTESELKN
EINILQRNLMETTTCSQNNNEKLKQLQKQLSNTENERRVLAERLDSVQQSLSDLRHMNQN
LQDQVARLQTELANNEVQRSGLEAQLRLTKWPQEGGADKDEDLMRQLQIVQREKSEMRGK
LDALNDKVKLLETEKRTLENQVSTLKSVGTRSKSYERPEKAHIELLGSSYSFDNLEQENR
ELRLKIRRLETQLAEKEAELIRAKSIYTHSHSILESSRDRTGEIERLRAAQLQAEKLLEA
REQSHRQQVIRLENQIQLLREQLNQEIKRRQLYVLRSSRAGREMQQLRQALGDSLRTVAQ
DPSLDAVLLEHEARKLDSTLTSTTSLPPSLALAPPSTYDRSSTPSRLEKT
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgccacggacattatccaaaaatactggtcagttaacaccgaaaggcccgatggaaaga
agaagaccgccattactcaaaggaacaagtaaaataaaggagtctgaacgaaaaactagt
aaaatggatcctacatatagtacaatcagttgtcctggggacgatgaagaaacactttca
ccagaagctttagtcagacaaaattatgaattacgacatcgcttggaagaagaagcagca
agttataaaagacgtttagatacttacagacaagctcaacaacatcaagctgctcttgtt
tctcgtttgcaagctaaagttttacaatataaacaaagatgctcagaattagaaagtgtg
atggctgaaactgctgcaatagataatagtaaactatctactcaaccacaaggtacatct
gcattagatgttgcacatcaaacacttagagagatgcgtgaagagcaaattcatgattta
gatactgcattaaaaaaacttgcagaggagcgtaaaaaatgtgaaaaattattagaatta
aatacatctttgaaagatcaattagaagagactagtcaaacaaatgaagctctcacaaat
gatcttcaaaaactaagtaacgactgggatattttacgagaagaattgaccataaaagaa
gaagaatggaaagaagaagaacaagcttttaacgattactatacttctgaacataacaga
ttattaaatctttggcgagatgttgtgtctgtaaaaagactatttgcagatattaaatct
tctacagatagagatttatcaaaattaaataatcaaattacatctgctactaacgatatt
gtttctacctgtaataatacaagtatttttatgaagatgcaaacaagtataattcaaccg
tctgtatcgcaacaaattcaagaatcacagatggttatggacgtaaaatcagaaatggga
ttacttaagcaacagtatgacgttgcacaaaatgaaattcggatgaaggatgatagaatt
aatcaactgattcgtgaaatacatgcattggaagaaagatgtggagaagcagaagcacaa
acaaacaatataacgcgtatgcaggaagatatagaaattttacaaaatgccttaagagat
atagctcatactgttattcaagatgctgaaactcgtgacactgagagtacgcaaccacct
ccacatgttcatttatcacctactggaccaattcctcaaagatcgccaagacgtggagcg
agagctaatactataccagcttttgcagagagtactattagtgccgttcaagccgcttta
cataaatatcaattaacgatacacgatttacaagtgaaattgcaaactcataaagagcaa
ttatcatcatttcgtaagcaaagcgaaaatgcagaagaaaatgtacgaactttacaagtt
aaaattacagaacttgttggtgaattggatacaacacgttctcaatgtacacaacttgta
gaagagaaagaagttttacataaaaatttagatactattaaaatggaaaaaagtgtatta
gaaaaaaatagaatggaaatcaatgctatggttgaaacattaaatgcagactatgaaaaa
atacaaaaggctaataataaattacaaaaaatatgtgatagtttagaagatgataaattg
tatcttcaaggtgaattggaaagattatcaaaagatgcagaattacgagaattgagtctt
cgttcggaggaaaacagatgcagcaaaatgagagaagagcttttaacgctacaagaagaa
ttgaataaaacatacttaacaaaagatatgttagaacaacaaaaattagagacagatgca
ttaatctcacaaatagagaaaagtaaaggagacattgaattagaattggaacatgtatta
ttagaaaaatctgacataaaagaaatgttattaaaattagaatcagtttgttcaaatcac
gagcaagataaacagagattgcaagaggaattaaaaaagactatagaagagaaaaataag
cttgctaatcaatgtgcagatcaacaaggagatttaggttctttaagaaaagaattacta
caagcagaacaaacgcgtttagatttggaatctgaaaaagttacacttaacgaaaaagtt
aaatttttagaaattgagaaggaaaaaattgaaatggaattgagtcaagtaactcgcgaa
cgtagcgatttgagcaatcagctctctgtacttgcacgaaaaaaagaaacattgaacgaa
gaattaatgagaataagacagagattagaacaagctaatgaaatgaattcaaggattaat
agaagcttggaagatcttgtaaaagataacgaagaaaaacaagtacttttagaaaccaat
gaaaaagaacttcaaagattacaagaacaaatagcttcggtacgttctgaaaaagaaaca
ttagagggagttttatatgatacgcaaactaatttagaatcaacgcatataaaaaagtct
caattggaaaaggaacaaaaagaattgttaataaagcaagaaagtttaaaaggacatatt
ggaagattaactaaggatttggagaatagtcaaaaacaatcgcaggatatcaaacaagct
ctggcacaacaatgctgcgaccaagaagcaaattttcaacaagccatttttaatttaaaa
aaacaaaatgaagaaaatgttaagaaattaaacgaggagaaggaacaattaaagataacg
ttagaaaagagattacagcaatctttattacaacttggcggggaaaaaaatgatgagatt
aatcagttgcaacaacgagttgaagaattgcaacagcatattgaaaatttatgtcaacag
cacgaagaagttctacttagggctgagaacgataaacaacaagctctcttaattgctcat
catgatcaacaagcactgatggagaaattagagaatgccttgcgtgatttggaagaagaa
aaagggaatttggaacgtttaaaaagagatacctcaattcgtagcgaacaggatcgtaat
aatctcaatcagttacgcgataatttaaatcgatttaaaacaaaattagatgagaccaaa
ctgaagggagatgaagatagattgaagctcgaattaaaaatcgaagaacttttgaaagaa
cgtgaatccgttcaaaaggagtcagaagaacttagagtgcaattacatatggcggaagat
aaattagatggacttcacaatcaattgcatgagactgttagaaaattgaaagacactgaa
aatgttaatgatacgttacgcaaagaattggttgacgttagacgacaattaacagattca
acatttgaaaaagaaaaatataatacaagtaacaaagaattaagagaacatattaaacgt
atagaaggtgaaaaacgtgaacaaggaagagcgttagaggaaacttatcaaaaaattgca
gcattagatgatgcaaaaacggcgatggaagcagaaagatctcgtcttcaagtacaactt
cgtgatatggaacgtgatatgttacaattacaacaacaatttcgtctcacgcaggacgag
ttacaaaagtccaatgaaaataatgcacaagcacagaataacgaaaaggagttacaagct
agattagcgaatgaaacggaagaaagagaacgtttgcaacttcaattgcatcaagttaaa
aaacaggtattggatctagataatagtttagaagtaaccagacaggaattaggtaaatta
cgatctcgtgcagacgaagaggatgaaagatggagatctcgcgagcaagaattattagta
cgattggaggatagtcgttgccgtgaaagaaaactcgaagatcaaaaacacaatttagaa
gtttgcttagccgatgcttctcaacagattcaagaacttaaggcacgtcttggaggatcc
gaagggagagtaagagctttggatgctcaattgtctcaattagaagttgctaaaaaagaa
gtggaacagaaattgagtagcattggtttaacattacgtcgtatcgctggtattcaaatg
gacggttctgtgaatatgccatttaaattaatgagcccttcgagaagatggagtcctgca
agaggacacgaacacggtgattctagcaaagatatcgtgatcgatgttgatccagaagct
gtaagaagaggcatgagatctttgatgcaacaagtagcacaaatcgaacgtgaaagagat
gattataaaaccgaattgtgtagtttgaaaacacaacttagcgagtatcaagaaaatcaa
actaaagtcgacgaaagattgaataatttattagcaaatatgaggactatacaagaggag
aaaaattctttggaagctagaatgtcacagagagaaacgagccatcaaagccaaatggat
atgttacaacagaaaacggacgagtgcgatcaactccgtgagaaagtattaaatcttgaa
atgatcgttaattctgatacagaagaaaagaatttatacgaagaaaaattagagaagatg
aaacagacattgaacagaatggaaaatgaaagacgtaatttacaagaagaacttaataag
agtgaagctcgtgcaacaaagttagaattacaaagaatgtcgttggaaggagatcttcaa
agattacaaatgatgctacaagagagagaagcaaatatacagaaattacaggatcgatgc
gaaactcaaaatcgtactactgctggtttagaggaacgttgtgcgtcgttaaaatctacg
atagaacaattgaatcttgcattggaaaaatcattcaacacggagagtgaattgaaaaat
gaaattaatattctacaacgtaatctcatggaaactactacgtgttcacaaaataataat
gaaaaattgaaacagttgcagaaacaactttcaaatactgaaaatgaacgtagagtcttg
gccgaacgtttggattctgttcaacaatctttaagtgatttaagacatatgaatcagaat
cttcaagatcaagttgccagattgcaaactgaattagctaataacgaagtgcaacgatca
ggattggaggcacaattaagattaactaaatggccgcaagaagggggtgcggataaagac
gaagatttgatgagacaattacaaattgttcaaagagagaaaagtgagatgcgaggaaaa
ttagatgcacttaacgacaaggtgaagttattagaaactgaaaaacgtactctggaaaat
caagtatcaactttgaagtctgtcggtactcgtagtaaaagttacgaacgtcctgagaaa
gcacatatcgaattattaggcagttcttacagttttgacaatttggaacaagaaaataga
gagttaagattgaagattcgaagattagaaacgcaattggcagagaaggaagccgaacta
ataagagccaaatcgatctatacacattcacattctatattagaatccagtagagataga
acaggagaaatagaacgattaagagcagctcaattacaagccgaaaaattattagaagcg
agagagcaaagtcatcgtcaacaagttatacgtcttgaaaatcagattcaattattgcga
gaacaactcaatcaagaaattaaaagacgtcaattatacgttctcagaagttcacgagct
ggtagagaaatgcaacaattaagacaagcgttgggtgattccttaagaactgtagcacag
gatccatctcttgatgcagtacttttagaacatgaagctcgaaaattagatagtacactc
acgagtacaactagtttaccgccgtcattagcattagctccaccgtcaacatatgataga
tcttccactccatcgcgattagaaaaaacataa
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