Vespula pensylvanica (western yellowjacket): 122629056
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Entry
122629056 CDS
T07720
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122629056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vps04131
]
122629056
Membrane trafficking [BR:
vps04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122629056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
zf_RING_Vps8
ANAPC4_WD40
zf-RING_Vps41
WDR55
Prok-RING_1
Beta-prop_EML_2
zf_RING_Vps8_fungal
TPR_VPS8_2
Beta-prop_IP5PC_F
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
zf-RING_2
zf-RING_UBOX
Beta-prop_Vps41
PQQ_2
WD40_WDHD1_1st
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122629056
NCBI-ProteinID:
XP_043667983
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Position
5:6546323..6553405
Genome browser
AA seq
1319 aa
AA seq
DB search
MALNHFRITYCCKMTDKIKMAENGLGSEIGSQEYLATEAINLDFIELDHAEYAIPTVEEL
PSLESILTEPDCTSLSGTDDDLGAASIEKLGSSETTSVGSHLSLNSLNKSSKASQHSPSG
AILRHVILKGISAQILSASDRVNAGLASAVTAGGNMLVIGTSHGLILSFDSSQTLRWCDQ
EARHQGSVSALCFNHDGSRILAGFARGLILMIDSSDGKVLRTLTEVHPLDTAVLHVKFTD
SSKVALCSDSGGSVFELNFTRVMGVRGCDSRCLFSGSRGEVCTLEPLLLNNLPSHPLKNY
TLVAMATLSKVIVVCIRPRMRVLLTHSLSGAAIAPPQLSWQLVVIQAADASRVVDPVLAL
ARDDVVHFYQVSTEAGTRVKLSPLRRMSFPYTISNLRWLNPRSLVVLDTQEKLHLLDVRT
QDSLETLDMSRVCISYASSHFKGLCTGGNVSKAMALAGERACYNTVITFGNQLLLLGTKS
LHAVCIRTWTERLQHLTMQGRFPEALALGLSFYQDKGKAVVGLRGSKQRRKQIVRDTVCQ
VLIQYMEQLNHSSITDNTEFDIVNTCVDYCIQLENTELLFGRLWDLVSETEGLKSSYLCA
LESPLLNGSLHPRLPPLIVQQLFILYDQEGKVDSLQTIAVLLDIDCLDIHQITTICRRRS
LWEALIHLQTAALGDFTAPVHQLVPILQNALTNTKESLSRDILQLGNALLVYASCCLAGR
GFPRDTLPEVMSQRAKTDILRALLSQHSSLANDAERQYPYLRTLLRFDAKGFLDVIAIAF
QEPEFTSEMGLRQRQRLIDILLSIVLPSTPLTPMNSDYITDEQRSLVLIFIVNEAAGDTI
NLEPNMLIRIVEVLCDCSSVITSRDLKSEKENAVLGLLNSKKLRNISDTTLLNLAQKANF
MRVAELLYTAREDWIAVCKCMILDPTRHCDIWPWLERLPTASLYPVLVTSASALVAINVT
QFALIIANRVQNKIPEILKKFDDTISLEYALLGALYQLSQYKEEETTPELSTELLEKYLT
LMCKIEPKNVVNHINGPHGCRLDEALKIVKQSNHIDAEAVMLEKLGNYQEAFDLLLNQFK
NHLNMYCQDKAFEKEAIITAMQLAGMCRRSAGSLSWMPLVEVVLKTHSDSINENVEKLSG
KLLKIILESLSGTTALSTVLEQILKHPLSKSGTIGDIRQLLAGVLTHSQYEQTLVETTAR
LVSLELHKALKTSLRDAGKACASISLICPICRQILCQSTNYVVIFECGHGYHLDCLGEPR
SCYKCLNAKGWAPVVTNIIRTNNSHLERKKILPPEFMRTKNFSLSLAPPTSIPDLEGIF
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaatcattttaggattacatactgctgtaaaatgacagataaaataaaaatg
gctgaaaatgggttgggatctgaaattggatctcaagaatatcttgcaacagaagctatt
aatttagattttatcgagttagatcatgcagaatatgctataccaactgtggaagaatta
ccctccttagaaagtatattaacagaacctgattgtacatcattatcaggaacagatgat
gatcttggagctgcatcgattgaaaaattaggtagcagtgaaacaaccagtgttggtagt
catttatctttgaattcactcaataaatcttccaaagcttcacagcattcaccatcaggt
gctattttaagacatgtaattttaaagggtatttctgcacaaattttatcagcaagtgat
agggtcaatgctggattagcaagtgcagttactgctggtggaaatatgttagtaattggt
actagccatggtttgatattaagctttgattcatcacagacattgcgatggtgtgatcaa
gaagccagacatcaaggatctgtctctgcattatgttttaatcacgatggaagtagaata
ttggctggttttgctagaggtcttattttaatgatcgacagtagtgatggaaaagtttta
agaacacttactgaagttcatccacttgacactgctgtattgcatgttaaatttacagat
tcttcaaaagttgcactttgtagcgatagtggtggatctgtatttgaattaaattttaca
agagttatgggagttcgaggctgtgatagtagatgcttgtttagtggttctagaggtgaa
gtgtgcactttagaacctttattactaaataatttaccttctcacccattaaaaaactac
acattagtagcaatggctacattatctaaggtgattgttgtttgcatacgacccagaatg
agagttcttcttacacattcgctatcaggtgctgcaattgcacctccacaactttcttgg
cagttggttgtaatacaagcagctgatgcatctcgagtagttgatccagtattggctctt
gcacgggatgacgtagtacatttttaccaagtatctactgaagctggtaccagagtgaag
ttatctcctcttcgtagaatgtcatttccatacactataagcaatttacggtggttgaat
ccaagatctttagttgtattagatactcaagaaaaattacatttattagatgtaagaacg
caagatagcttagaaacattggatatgagccgcgtttgtatttcatatgcttccagtcat
ttcaaaggattatgtacaggtggtaatgtttctaaggcaatggcattagctggtgaaaga
gcttgttataatactgttataacatttggaaatcaacttttgttattaggtacaaaaagc
ttacatgcagtatgcataagaacatggacagaacgattgcagcacttaacaatgcagggt
cgttttccagaagctttggccttaggactttccttctatcaagataaaggcaaagctgtc
gttggtcttagaggttcgaaacagcgacgaaaacaaatagttcgagacacagtttgtcaa
gtcttgattcaatatatggaacaattgaatcattcctctataactgataatacagaattt
gatatagtcaatacttgtgttgactattgtatacaattagaaaatacagaattattattt
ggacgattatgggatttagtatctgaaactgaaggactcaaatcaagttatttgtgtgct
cttgaaagtccattactgaatggaagtcttcatccaagattaccacctttaatagttcaa
caattatttatcttatatgatcaagaaggaaaagtggattcacttcaaacaattgctgtt
ttattagatatagattgcttagatattcatcagataacaactatttgtcgtcgaagaagt
ttatgggaagctcttatacatcttcagacagcagctttaggtgattttacagcacctgta
caccagcttgtgcctattcttcaaaatgcattgacaaataccaaagaatcattatctcga
gatattctacaacttggtaatgcacttttggtttacgctagttgttgtctcgcgggacgt
ggtttccctagagatacacttcctgaggttatgtcacagagggcaaaaacagatatattg
agagcacttctctctcaacattccagtctagcaaatgatgcagaaagacaatatccttat
ttgaggacactgcttcgttttgacgcaaaaggttttttagatgtaatcgccattgccttt
caagaaccagaatttacctctgaaatgggtcttagacaacgacaaaggctcatagatatt
ttattgagcattgttctacctagtacacctcttactccaatgaattcagattatatcacg
gatgaacaaagaagtttagttctaatatttatagtaaatgaagcagcaggagatacaatt
aatttggaaccaaatatgttaattagaatagtagaagtattatgcgattgctcatctgtt
atcacatctagggatcttaaatctgaaaaagagaatgcagtgttaggactattaaattca
aagaaattgcgcaacatatcagacactactttattgaatcttgcacagaaagctaacttt
atgcgagtcgcagagttgctgtatactgccagagaagattggatagcagtttgcaagtgc
atgatacttgatcctactaggcattgtgatatctggccttggttggagcgactgcctaca
gcttcactatatccagtcctagtaactagtgcttcagctctggtggcaataaatgttaca
caatttgctcttattattgccaatcgagtgcaaaataaaattcccgaaattctcaaaaaa
tttgatgataccataagtttagaatatgctctcctaggagctctatatcaactcagtcaa
tataaagaagaagaaactactccagaattatcaactgaacttttggaaaaatatttaaca
ttgatgtgtaagatagagccaaaaaatgtagtcaatcatataaatggaccacatggttgt
agattagatgaagcattaaaaatagtaaaacaatccaatcatatagatgctgaagcagta
atgcttgaaaaattaggaaattatcaagaagcttttgatcttttgctaaatcaatttaaa
aatcatttaaacatgtattgtcaagacaaagcttttgaaaaagaggctattattactgca
atgcaattagcagggatgtgcaggagatctgctggaagtttaagttggatgccacttgta
gaagttgtattgaaaactcattcagacagtatcaacgaaaatgttgagaaattgagtgga
aaattgttaaaaattattttggaatcacttagtggtacaacagctctatcaactgtacta
gaacaaattttaaaacacccactatcaaaaagtggaacaataggtgatatacgtcagtta
ctcgcgggagtactcactcactctcaatatgaacaaactctagttgaaactactgcacga
ttggtcagcttagaactccataaagcattgaaaacatctttgagagatgcagggaaagct
tgtgcaagcatctctcttatttgtcctatatgtagacaaattctatgccaaagtacgaat
tatgtagtaatttttgaatgtggacatggatatcatttagactgtttaggagaacccaga
tcttgttataaatgtttgaatgccaaaggatgggcacctgttgttactaatattatacgg
accaataattcacatctggaaaggaaaaagattttgccaccagaatttatgcgtactaaa
aacttctctttaagtcttgcaccaccaacttctattcctgatcttgaaggcattttttaa
DBGET
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