Vespula pensylvanica (western yellowjacket): 122629144
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Entry
122629144 CDS
T07720
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122629144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122629144
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122629144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Ras
Dynamin_N
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
122629144
NCBI-ProteinID:
XP_043668152
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Position
5:complement(631434..635965)
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AA seq
696 aa
AA seq
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MSRHRDVRCMNYSDEYDGYDDVYGHSVEDDYCVSPSAEQFLFDRSKQQNIASFIMEPDIV
EDNEDDSTVSSPASKKLDLSELERAKLLSCMETIKNVTGDSIAESKIEDEIIQSGFDTEV
ALDKLLKTAPQKSITEQSRSSKECLNPCPGNKLSSMSTLQISTSSMVKVVPAGTSSIVKG
FTVTGSENTGHLSPHIQTPRSQSPCSEQNSPSVKRKENMKQDKNIVSLETDSLRSQSPMS
GHVTPDLDYKTKSIEDKRDVLRIYKDKRSNNKEQLHLVVVGHVDAGKSTLLGRLLCDLGQ
VPSRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETDNKCITLLDAP
GHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVN
KLDTVNWSKERFNEIVDKMSVFLKQAGYRETITFVPCSGLSGENVVMPAKTEGLSNWYTG
PTLVNVIDNFKCPERPVNKPFRFSVNDIYKGTGSGFCVSGHVETGMVAVGDKILVLPQNE
VAVVKGLQADDASIVNAFAGDHISLTLSGIDQQNVGVGDIICNPQNPVPITTCFQAHVVI
FSIAVPITKGFPVIMHQQSLVQPGIITKLIAQLHKSTGDVIKKKPRCLPKNSSAIIEIVT
QTPVCMELYKDVKQLGRIMLRVEGTTIAAGLITKIK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatcgagatgttcgatgtatgaattattcggatgagtacgatggttacgac
gacgtatatggacactctgtagaggatgactactgtgtatcgcccagtgctgaacagttt
ttgtttgatcgaagtaagcaacaaaatattgcttcttttattatggagccagatatcgtc
gaggataatgaagatgatagtacagtatcatctcctgcaagtaaaaaattagatctttct
gagctagaaagagcaaagttattatcttgcatggaaactataaaaaatgtcacaggagat
tcaatagctgaatctaaaattgaagacgaaattatccaatcaggatttgatacagaagta
gcactagacaaacttttgaaaacagcacctcaaaaaagtattactgaacaatctagaagt
agtaaggagtgtctgaatccttgtccaggtaataaactgtcatcaatgtcaacattacaa
ataagtacatcttcaatggtaaaagttgtgccagctggaacaagttctattgtcaaaggg
tttactgtgactggatcagaaaatacaggtcatttgagtccacatattcaaactccacgt
tctcaaagcccatgttctgaacagaacagtccaagtgtaaaacgtaaagaaaatatgaaa
caagataaaaacatagtttctttggaaactgattctttaagaagtcaatcccctatgtcc
ggtcatgttacacctgatttagattataagacaaaatctatagaggacaaacgtgatgtt
ttacgtatttataaagataaaagaagcaacaataaagaacaattacacctagttgtcgtg
ggacacgttgacgctggaaaaagtactttgcttggacgtcttttgtgtgacttaggacaa
gttccatcgagattaattcacaagtatcaacaagagagtaaaaaaattggtaaacaatcc
tttgcttatgcatgggtgctagatgaaacaggagaggaaagggaacgtggaataacgatg
gatgtaggacattctaaattcgaaaccgacaataaatgcattactcttttggatgcacct
ggtcacaaagattttattccaaacatgatcactggtgccactcaagcggatgttgccttg
ctcgtagtcgatgctaccagaggtgaatttgaaactggatttgatagtggtggacagact
agagaacatgctttgttattacgttccttaggagtgtctcagttagctgttgtagttaac
aaattggatacagtgaattggtcaaaagaaagatttaacgaaattgttgataaaatgagc
gtttttttaaaacaagctggttacagagagaccatcacttttgtaccttgtagtggactc
tcgggagaaaatgtagtcatgccagcgaaaactgaaggtctttccaattggtatactgga
cctacattagtaaatgttattgataattttaagtgcccagaacgtccagttaataaacca
ttcagattttctgtaaatgatatatataaaggtactgggtctggattctgcgtatctggt
catgtagaaacaggcatggtggctgtaggggataaaattttggtgctgccgcaaaacgaa
gttgcagttgtaaaaggtttacaagcagatgatgcatccatagtaaatgctttcgctggt
gatcatatttcattgacattatcaggcattgaccaacaaaatgttggagttggtgatatc
atttgtaatccacaaaatcctgtaccaataacaacatgtttccaggcacatgtagtcata
ttctctattgctgtacctattacaaagggcttcccagtaataatgcatcagcaatctttg
gtacaaccaggtattataactaaattgatagcacagctccataaaagcactggagatgta
ataaaaaaaaaaccgcgttgtttacctaaaaactctagtgcaattattgaaatcgtaacg
caaacaccagtttgcatggaactgtataaagatgttaaacagcttggtaggataatgtta
agagtggaaggtacaacgatcgcagccgggttgattaccaaaattaaatga
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