Vespula pensylvanica (western yellowjacket): 122629147
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Entry
122629147 CDS
T07720
Name
(RefSeq) PHD finger protein rhinoceros isoform X1
KO
K06084
F-box protein 20
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vps04121
]
122629147
Ubiquitin system [BR:
vps04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
122629147
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
122629147
NCBI-ProteinID:
XP_043668158
LinkDB
All DBs
Position
5:complement(6951950..7041316)
Genome browser
AA seq
1813 aa
AA seq
DB search
MPASQTAATERRNERVMIAHEPPKLKTTLKIPPKQATNPLQFVKVGPCSLYRTAQEQLQK
VQEVKKIKQEVRDDPEDWQSNLDNWKSSRRKRQEHIIERVVEVKKLELEEHDRQRRRSKT
FSEMMEERGNRGRKLSISLAMYHEEDANDLSDLGIGTSSGKSSVSGDTHDDAHSVLSDRD
SEIEKNHSDVDNVTGDAGDNVNNNATRSSTAITTTTTTTTATSATKKPFGNGFHGNHNHN
QEYDSATTATASSPEPEEYTYEGAIRGYVSRVSQNIPRRSLVGLDAKLDNAKSSTNGSKT
SLNEENKGTTTPVVKVDILKRREIFEKASQKSSDQKANNRLSGDFTGTKSIKERLSNLEK
QKLETENNEKISNKALNRLSGDMSSIRERLSHLEKQAMERESKTTSGNHKVSSEELESVR
PLRERLSTLEKYSSSDESSAPATIHESRHNGELTARTIKDRLNALDAIRSKESAEKRASI
GKHSLCFRDQENRIDTSTPSERSSSPDSEYRAPRAAFHRSLDSLDADASSGPDTFERVQS
LEEFDYGRRYPASSSSAELLNDTDREDSGIHTADVSCSVSQADEPVDEEIVHASTIVEEK
PEDLRTIESTSCSSSSVQEKITTKSSTVANESTTTVANQQEAVATKDTAETSSGERSTNK
SCPHMQVEVNTNSNTLPTANRPIVYQSPRVPPRRTPPETLPKPKLPLFKDPIDPINNNET
LPTSKDTDDKSSSSPLSIEESLSNTTPSSPPSESSTNNLSITCPNQDTSKATRVVSKIPT
PLPRKTVPAKSSPTSSVSSASPPTSPSSPKLQSSSSKTRTSSNQSPKASEIPLPVNSNSP
SKLSSPSTPSTSSSNTSSPTSNTDHQSTFGEDTITAERRRTVVEVCEKVVVPQGKIPGTP
SVTPFITVDRVNEKQNSATAEEPIFMDKEDEEKKAETICQTTNSATTMPDREEREHIEIS
MNTKLETTMTTTTKNSGEEMTVDTPDSPASPIPMILGLERPTSLTFNKTEASNIDTINCL
SPVSPQQFLPLSLSNDEEIVTGLAFPLGPPTTIEPPKEKPPPPPVDDISDEEAPPVEPLK
RLNSTRRIKKELRTRRSDFLGIEGVNDDDLERELTLMKPPDMAAILAEERRIEQLHRRSY
DTDSNYEQDSSHERDSGVELGHVEDWTKQPVSPDMSQHSRQSSEPFGASVTSSEEDEITK
KEREIIEVLEKEEQWRYGNNHEQNSDLGEKLAHKLRELEEEKMQLERERAQEVVLRRQEE
NLRKNEDNVRKQEETLRKQQQQQQQQQQQQQQQQQQQQQQQQHLSYHHHHHHHHRHHHQE
DETRQQEVARIETETKRAEATRQEEERRIQAEQLRVQSEIEEKERRAADARRKEEIRIRA
MENQIREQENKILVGAGLNNHEDEFASGGSMEFRNETSYSPFVQEVLRVERELLQLEQEE
LKRQRNNLAYREQKQLKLAEQLQEQWKSLQDVAHGSSNIAQQYKHQPAVNYRSSMPNLQL
QDAQRRRPPPPPIPPAKPLRHIDQRQRDMTIRNSRVPSADSIPQQVDASLRHSASATTLS
CHAGQQMTRQTLQALSAAPRPRIVQGDQWVQRRKSDVPRGAHDFNYQHWLIQEAEQRRIH
EKNQRSPARKSQPHVTGTSVPYAAAPTRSDSKPLPDSIIQTLTQRVQNRAQEKPLSPRRR
LEHSTSQEHIPLQHSSTTQQLTLQQKPQQPSPSVHNTDNQEKMLSVSGKKKCSHCGDELG
RGAAMIIESLRLFYHMECFKCCVCHVRLGDGLMGTDVRVRNHKLHCHNCYSSDDGNSSTS
FKPLTTRNGNYYV
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctcgcaaaccgccgctacagagcggcgaaatgaaagagtgatgatcgcacac
gagccgccaaaattgaaaacaactttaaaaataccaccgaaacaagcgaccaatcctctt
caattcgtcaaagttggaccatgttctttatatcgtacggcacaagaacaattgcagaaa
gtccaagaagtcaagaagattaaacaagaagttcgagatgatccggaagattggcaatcg
aatctagacaattggaagagcagtcggaggaagcgtcaagaacacataatcgagcgagtg
gtagaggttaaaaaactagaactcgaagaacacgatagacaacggcgccgaagtaaaact
ttctcggagatgatggaagagcgaggtaacagaggtcggaaattgagtattagtctggcc
atgtatcacgaggaggatgcgaacgatttgagcgaccttggaatcggtaccagtagtggc
aaaagttcagtcagtggcgatactcacgacgatgctcacagtgttctcagcgacagggac
agtgaaattgaaaagaaccactcggatgttgacaatgtgaccggcgatgccggtgacaat
gtgaacaataacgcgactagatcgtcgacggcaataacgacgacgacgacaacgacgaca
gcgacgagtgcaacgaagaaaccattcggcaatggctttcatggtaatcataatcataat
caggaatacgattcggcgaccacggcgactgcaagttcgcccgagccagaggaatacacg
tacgaaggtgcaattcgtggctacgtttcgagagtttcacaaaatataccaaggagatct
ttggtgggtttggatgcaaaactggataacgctaagtcatcgacgaatggatcgaagacg
agcctgaacgaggagaacaaaggtacgacgacacctgtggtgaaggtcgacatccttaag
agacgagaaatctttgagaaggcatcgcagaagagctccgaccaaaaagctaacaacagg
ctctccggtgacttcaccggcacgaagtcgatcaaggagagactgtcgaacctggaaaag
caaaagctcgaaacagaaaacaacgagaagatatcgaacaaggcacttaaccgactatcc
ggtgatatgagttctatcagagagaggttgtctcatttggagaaacaagcgatggaacga
gagagcaagactacctctgggaatcacaaggtcagctccgaggaattggaaagcgttcga
ccacttcgagaaaggctttcgactttagaaaaatatagcagcagcgacgaatcatcggca
ccagctacgatacacgagtctagacacaacggtgaacttactgctaggacgatcaaggat
cgtttaaatgcgttagatgcgattagaagcaaggaatccgcggaaaagagagcgtcgatt
ggtaaacactctctatgcttcagagatcaagaaaataggatcgatacttcgacgcctagc
gagagaagctcttcaccagactcggaatatcgagcaccgagagcagcctttcatagaagt
ctcgactcgcttgatgccgacgcttcaagtggcccggacaccttcgaacgtgttcaaagt
cttgaggaattcgattatggccgacgttatccagcctcctcctcttcagccgaacttctc
aacgataccgatcgcgaggactctggcattcatacggctgacgttagctgctcggttagt
caagccgatgaaccagtcgacgaagagatcgtacacgctagcacgatcgtcgaggagaag
ccagaggatcttcgaacgatcgagtctacttcttgttcctcttcgtccgttcaagagaag
atcacgacgaagtcgagcaccgttgcgaacgagtctacgacgactgtcgccaatcagcaa
gaagcagtagcaacgaaggatactgctgaaacttcttctggggaacggtcgactaacaaa
tcatgcccgcatatgcaagtagaagttaatactaactctaatacactacccacggcgaat
cgtccgatcgtctatcaaagtcccagagtacctccacgaagaacaccacccgaaacactt
cccaaaccaaagctaccgcttttcaaggatcctatagatcctatcaacaacaacgaaact
ttacctacttccaaagatacagacgataaaagctcctcctctcctctttccatcgaagaa
agtctttcgaatactacaccttcgagccctccttcagaatcatctaccaacaacctcagc
attacctgtccaaatcaagacacttcaaaagctacaagagtagtctcaaaaatcccaacg
ccacttcctcgtaaaacagtccctgcaaaatcatcaccaaccagctcggtatcctccgct
agcccaccaacttcaccatcttctccaaaactccaatcgtcatcgtcaaagacacgaaca
tcgtctaaccaaagtcctaaagcttcggaaatacctcttcctgtaaattctaattcacca
tcgaaattatcatcaccatctaccccatccacttcttcgtccaacacatcctcgcctaca
tccaacacggatcaccaatcaacgttcggcgaggatacaataacggctgaaagacgacga
acggtggtggaggtttgcgaaaaggtggtggtaccgcaaggaaagatacccgggacacca
tcagtcacaccattcatcacggtggatcgcgttaacgagaagcagaactcagccacggcc
gaggaaccaatcttcatggataaagaggacgaagagaagaaggctgaaacgatttgtcag
acaacaaacagtgctactacgatgccggatcgtgaagagcgagaacatatcgagatatcg
atgaatacgaagctcgaaacaacgatgacaactacaacgaagaattctggcgaagaaatg
actgtagatacacctgattcacctgcttcgccaataccaatgatccttggacttgaaaga
ccaacgtccttgactttcaacaaaacagaagcctctaatatcgatacgattaattgtcta
agtccagtctcacctcaacagtttttgccgttgagcctgtcgaacgacgaagaaatagtc
actggtttagcttttcctttgggtccaccgacgaccatcgagccacccaaagaaaagcca
ccaccacctcccgttgatgatataagtgacgaagaagctccaccggtggaaccccttaag
agattgaattctactcgaagaatcaagaaggaattgcgaacgagacggtcggattttctt
ggaatagaaggggttaacgacgatgacttggaaagagagttaacgttaatgaagccacca
gacatggcagcgattctcgctgaagagagacgtatcgaacagctgcatcgtcgttcttac
gacaccgacagtaattacgagcaagattcaagccatgagagggattccggagttgaactg
ggacacgttgaagactggacgaaacaacctgtcagccctgatatgtcgcagcacagtcga
caaagtagcgaaccttttggcgccagtgtgacctcatcggaggaggatgaaataacgaag
aaggaacgagaaattatcgaagtattagagaaagaggaacaatggcgatatgggaacaat
cacgaacagaacagcgatttaggagaaaaattagctcacaaattgcgcgaactcgaagaa
gagaaaatgcaattggaacgagagagagcgcaggaagtcgtattacgtagacaggaagag
aatttacggaaaaatgaggacaacgtgcgcaaacaggaagaaactctacgtaaacagcaa
caacaacaacagcaacagcaacaacaacagcagcagcaacagcaacagcaacaacaacaa
cagcaacatctgtcttatcatcatcatcatcatcatcaccatcgtcatcatcatcaagag
gatgaaacgagacaacaggaagttgcacgtatcgagacagaaacgaaacgagccgaggct
acacggcaggaagaggagcgtcgaattcaagcggaacagttgagagttcaaagcgagatc
gaagagaaggaaagaagagcggctgatgctcgaagaaaagaggagatacgaataagagct
atggaaaatcaaattcgcgagcaagagaacaagatattggttggtgctgggttgaacaac
cacgaagatgaatttgcttctgggggttcaatggaatttagaaatgaaacttcttactct
ccgttcgtacaggaagttctacgagtcgagagggaacttctgcaattggaacaagaggag
ttgaagaggcaaagaaacaatctcgcttatcgcgaacaaaagcaactcaagttggcggaa
caattacaggaacagtggaaatccttgcaagacgtcgctcatggttcatctaacattgct
caacaatacaagcatcagccagccgtaaattatagatcgtctatgccgaatcttcagtta
caggatgctcaaaggagacgaccacctcctcctccgataccacctgctaaaccattacgt
cacattgatcaaagacaaagagacatgaccatcagaaacagtcgagtaccgtcagcagac
tcgataccgcaacaagtagatgcatctttacgacatagtgcctcagccaccacactttct
tgtcatgctggtcaacaaatgacgaggcaaacgttacaagctcttagcgctgctcctcga
ccacggatcgttcaaggcgatcaatgggtccaacgaagaaagagcgatgtacctagaggc
gcgcatgatttcaattatcaacattggctaattcaggaagcagaacaacggagaatccac
gagaaaaatcaacgatccccggcacgaaagtctcagccgcacgtgaccggaacatccgta
ccttatgccgctgcaccgacacggtcggatagcaagccgttaccagactccattatacaa
actcttactcaaagagtacaaaacagagcgcaagagaagccactatctccaagaagaaga
ttggaacatagtacgagtcaagaacacattcctcttcaacattctagcaccactcaacaa
ttaacgttacaacagaaacctcagcagccatcaccgtccgttcataacaccgataatcaa
gagaagatgttgagcgtcagtggcaaaaagaaatgttcgcattgtggagacgagctgggt
cgaggcgccgcgatgataatcgagagtctacgcttgttctatcacatggaatgcttcaag
tgctgtgtctgtcacgtacgactcggtgacggattaatgggaacggacgtacgcgttcga
aaccacaagctccactgccataactgctactccagtgacgacggtaattcatcgacttct
ttcaagccactaacaacacgcaatggaaattattatgtgtaa
DBGET
integrated database retrieval system
