Vespula pensylvanica (western yellowjacket): 122629583
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Entry
122629583 CDS
T07720
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122629583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122629583
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122629583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CSTF1_dimer
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Beta-prop_IFT140_2nd
PROPPIN
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
122629583
NCBI-ProteinID:
XP_043669089
LinkDB
All DBs
Position
5:complement(4054466..4056858)
Genome browser
AA seq
462 aa
AA seq
DB search
MGVFSKNSEEVTNIQSPSRDKETHNIMKEPDVDPKNIIKSRELLYRLMISQLFYDGHQTL
AVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRTKKDTNNLPTFTASFDNTLGPGLDLE
FETEAQTQAPEPAQYETAYVTSHKGNCRAGAFSTDGQLIATGSVDASIKILDVDRMLAKS
APDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASVKK
AFRTITDADQIRCLSFHPTGDFLVVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITSIK
YSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSL
IKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRK
QLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRRMPTH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttttttcgaagaattccgaagaagtaaccaacattcagtcaccttccagagat
aaagaaacccataacattatgaaggaacctgacgtggatccaaaaaatataataaaaagt
agagaattactatacaggcttatgatcagtcaattattctatgatggtcatcaaacactt
gctgtacagttatctaacatgattcaagcagaaccgccatgtccaccatctgatcgttta
cttcatcttatgttaattggtgctgctcatgaaccagatcgtactaaaaaagacacaaat
aacttacctacatttactgcaagttttgataatacattgggccctggtttagatctagaa
tttgaaacagaagctcaaacacaagctccagaaccagcacaatacgaaacagcttatgtt
acttcccataaaggaaattgtagagcaggagctttctccacagatggacaattaatagct
actggatcagtggatgcatctattaaaattttagatgtggatagaatgttagcaaaatct
gcaccagatgaaatggcacctggtgatcaaaccggaggtcatccagtaatacgaacatta
tatgatcatttggaagaagtaacatgtttagaatttcatccacgtgaaccaatacttgta
tctggcagtcgtgatttttctgtgaaactatttgactttagtaaagcaagtgtcaagaag
gcatttagaacaattacagatgctgatcaaatacggtgtttatcatttcatccaactggt
gattttttggtagtaggaactaatcatccagttgtaaggttatatgatgtgaacacagct
caatgttttgtatgcagtattcctagtcatcaacatacagctggaattactagtataaag
tattctccagatgcaaaaacatatgcatcagctggtaaagatggaagtattaaattgtgg
gatggtgtttcaaatcgttgcataaatacttttgttaaagcacatgatggttatgaagta
tgttcagtgacatttacaagaaatggaaagtatttattgtcttctggaaaagattccttg
ataaaattatgggaattatcaacaagtagatgcttaatagcatatactggagctggtaca
acaggtaaacaagaacataaagcacaagccatttttaatcacacagaagattatgtaatg
tttcctgatgaagctactacgtccttgtgtgcctggaattctcgaaatgcatcaagaaaa
cagttattatctttaggtcataatgggcctgtaagattaattgttcactcaccaactgcg
cctgcgtttttgacatgtagtgatgattttagagcaagattctggttcagaagaatgcca
actcattaa
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