Vespula pensylvanica (western yellowjacket): 122629905
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Entry
122629905 CDS
T07720
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122629905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122629905
03036 Chromosome and associated proteins [BR:
vps03036
]
122629905
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122629905
Coactivators
SAGA/TFTC/STAGA complex
122629905
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122629905
STAGA complex
122629905
TFTC complex
122629905
SAGA complex
122629905
SLIK complex
122629905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
DSE1_N
CFAP251_N
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_EIPR1
PAC11
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Tricorn_2nd
PEP5_VPS11_N
Beta-prop_NOL10_N
Beta-prop_SPT8
ASA1
WD40_like
Beta-prop_WDR35_TULP_N
WDR54
DNAI3_WD
Beta-prop_NWD2_C
Beta-prop_DCAF12
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122629905
NCBI-ProteinID:
XP_043669731
LinkDB
All DBs
Position
6:8275358..8278422
Genome browser
AA seq
652 aa
AA seq
DB search
MENEKSTMLAVLQLLRKYNLKGTEELFRKEANLTDVSTDETQQTDSEVSSVLSAYKSEGD
PALYEKAYSELKKFVESSLDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLIEKFGGN
LEEYYQSDLKKLSNVTRREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAVVGEATRQDNKAKVYYGLLKEPDIQCVPPAEE
EEDDVAGADGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDVDKLEKVKALREA
SKRVVLGPDTLPSICFYTLLNTVHSVTAAEVAEDSSLLAVGFSDSVIKVWSLVPQKLRLM
KSGEQLQDIDREADDVLVRMMDDRTAETSRSLYGHNGPIYNLSFSPDRNLLLSCSEDATV
RLWSLHTWTCVVCYKGHLFPVWCIRFSPHGYYFATASHDKTARLWATDCHQPLRIFAGHY
SDVDVVQFHPNSNYIATGSSDMTVRLWDCVTGSQVRLMTGHKGPIYSLAFSAEGRFIASA
GADCRVLVWDLAHGHLVAALSSHTGTIHCLSFSRDGNILVSGSLDCTIILWDFTKLAEEM
SLEDVNVSHNPDVKTNAEAYLLRTFPTKNSPVLALHFSRRNLLLGVGMFDSM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaaagagtactatgcttgctgtcttacaacttcttaggaaatataattta
aagggaactgaggaattatttaggaaagaagcaaatcttacagatgtatccactgatgaa
actcaacaaacagattcagaagttagcagcgttctgtcagcttataaaagtgaaggtgat
cctgctttatacgaaaaggcatatagtgaattgaagaaatttgtggaaagttctttagat
atatacaagcatgagttaggtacgatattatatccagtgttggtacatatgtacctagaa
ctagtatacaataatcattcggaagaagcgaaacaattgatagaaaaatttggtggaaat
ttagaagaatattatcaatctgatttaaaaaaactttcaaatgtcacaagacgggagcaa
atggcaggcaatgaattaacagacacatttaaatctaaccaatttattataagaatgtca
agagatactttatcgatattaaaacggcatttacaagaaaaaaagcacagtgtattgctg
aatattatacaagaacatttatattttgatatgtatgaaggagttgctcgtaataaacaa
caaattgaagctacttcaggtgctgtggtgggcgaagcaacaagacaagataataaagca
aaggtttattatggtcttctaaaggaaccggatattcaatgtgttccgccagctgaagaa
gaggaggatgatgtagctggtgcagatggagataaaccaaaaaaaaagaaggctaaaaaa
gatccgttgttttcaaagaaaacaaaatcagatcccaatgcaccacctgtgggtagaatg
ccattacccaacttaaaggatgtagataaattagaaaaagttaaagctctgagagaagca
tctaagagagttgttcttggtcctgacacattgccttctatttgtttttatacattactc
aatactgtacatagtgtaactgcagcagaggtagcagaagattcgagcttattagctgtt
gggtttagtgactctgtcattaaagtatggagtttagttccacaaaaattaagactgatg
aaatctggtgaacaattacaagatatcgatagagaagcagatgatgtattagttagaatg
atggatgacaggacagcagaaacatcaagatcattatatggacataatggaccaatatac
aatctttcttttagcccagataggaatcttttactttcatgttctgaagatgctacagtg
agattatggtcacttcatacatggacatgcgtagtttgttacaaaggtcatttatttcca
gtatggtgtataagattttcgcctcatggttattattttgcaacagcctctcatgataaa
acagcaagactttgggcgacggattgtcatcaacctctgcgaatatttgccggtcattac
tctgatgtcgatgtagtacaattccatcctaattcaaattacattgcaactggttctagc
gatatgactgtgagattatgggattgcgtaaccggtagtcaagtaagattaatgactggt
cataaaggtccaatatattctcttgcgttttcggctgaaggtcgattcatagcttcagct
ggtgctgattgtcgcgtgcttgtgtgggatttggcacatggtcatcttgtggctgcttta
tctagtcacacaggtaccatacattgtttatccttcagtagagatgggaatatattagtt
tcaggatcattagattgtactattatattatgggattttacgaagttagcagaagaaatg
agtttggaggatgttaatgtctcgcacaatcctgatgtgaagaccaacgctgaagcttat
ttattgcgaacgtttccaacgaaaaattctccagttttggctttacatttttctcgaaga
aatttacttttaggggttgggatgttcgattctatgtga
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