Vespula pensylvanica (western yellowjacket): 122630354
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Entry
122630354 CDS
T07720
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122630354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122630354
03036 Chromosome and associated proteins [BR:
vps03036
]
122630354
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122630354
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122630354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122630354
NCBI-ProteinID:
XP_043670700
LinkDB
All DBs
Position
7:complement(6168171..6177877)
Genome browser
AA seq
1881 aa
AA seq
DB search
MFGQSGNTSFTGFNTATQSSPFGQSAFSKPITTTSFGIGTTPVFGSGNTSLFSSKPAGSS
TSGLFGNTTTPPAFRQQTNAQPSFGAFGTTNTNTNLFGTQQNATPNLFGTSTATSAFGQG
NKTGGFSFSTPASSNLFGQPQQPSQQVTPFGQTNATGNTNLFGATTGFSNTPANTAITGT
VVKFTPVITTDSMTKNGTAHSISGRHCCIVAMKEYESKSYEELRFEDYSVGRKGPQGPQG
PSTGLFGASAQPSPFGNTAAGTSTAATGFSGMSGGFGTTSQSGSNSLFGKPMANFGGQPA
TTANTFAFNSTTNTNLFGNNTQAKPFGTAAPTSLFQTSNANQTAGTGFGNINTTPNTGFG
STFGTAQPNQTIGLFSQNKSAFNIPSTSSGTGFTTFGQTSVSNSGTSLFNAKPAMTGFGV
STFGSTPAPLSFGTNTGFNTGQNSGNSLFNSSFKPAGQTPGFSFGSTGTPSTGLGTNTGL
NLGGSSTLFGQQKPSGVFGNTGNTTTFNNPGSFGTSFSFGTNNNTMSGQGTGLLSGLAPN
QVKNSGTVPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNATSKILSNSQYKVA
TNNKSPKIKTRIVSTAQLSKKSLFEGLEEEDPVLSEAFQPRPNAKRLVLRPKPITNSTTQ
SLNENSESHTKNDSREERIDNSNVHNSSIEAIDKENKNLETNRQFSADRKSSTSWLKSSL
PRKGRVLCDDELFEGQRSPFSETNNSQEIINNTITELNPHHSINNQTDPDLSNLTETPLS
ASLGDRSSIDLITQNTDTSQELDTNSMSTSQNNWSTNLAKVTLQRVGYYTIPTLDKLDDY
VCGETCVVPNFTVGREGYGNVFFPESFDIYGLNLDEIVYFRHKEVIIYPDDEKKPPVGQG
LNRKAQVTLDRVWPHDKTRHEPITDPHRIAAMNYEAKLRKVSAKHDTNFLEYRPETGSWV
FKVDHFSKYGLSDSDEDDNNVPPKSDVKKLKITNLQQKLPEKVEQQKSINKNATTTIENH
VKAGESRLSNLECDFLGTDPDSPTYRHRNDEKKLLISPTTAYARITGTDSHKLQLMKASF
FDTAEEEMDQESVHDTLPVLPAKDLSNNFFNAGTKIDRHSIATIYTPILRSNFISSQTSL
STNEEQMLHETNIRSKSKLSNENTGAQTFVLTKSFPDPSIAPITKVMRCHSEVIPLSESI
LNKLHFRCAADFGIQMGRVFKSSWGMGLTLLSLSTQEQAAKIPLQNTFDQLGSYVCGRIP
GDTTSMNVVQRLQILGGNGAEPEYIQMFKESIEGHLKIQLANCIMGHEGDCPTFNVATET
ASTTLSAHSKLAQELADQFSSDFMMVYTKTVFKLCVALWGDLPDINISTGNAKHHNVMVR
KEAVGEWLQSVVKETVEKEIAEIDMDDKIILSLLTALRLEEACQIARKVGDHCLALLMAQ
LRSGLPVKEMVKQQLAVWQDLDVDENLSINRLKLFTLIAGEPLISSKHGTINTCEGLDWK
RALAVHLWYLSSPTASITDVLDLYEASFNVDPTEAYSVIPEPEYKSNGYDPETNNKKSVH
DLCFHILKLYCTGNHSLEKLLNPLTYTLDPFDYRLSWLMQQTLLSLGYSHLSEYVTSLTH
INFATQLEGYGLWHWAIFVILHLRDAGRRRTAVLDLLARHVEIDDIPEYVKQEEFLKEEL
GIPSAWIHQAKAMKSRVSKRYGEAAWYFIQAEEWNMAHEIIIEHLAADAIINENYEYLQS
LLNPLVPEECSSIISNWPNQGQLLWDYIEITTQIQNLLNSSDSCAINYKLELLKPRLTSL
CSKIDQFPCLTAKHRLCQAEIAKRTLHVAKNLLILQANENTSMLKVLVYLISQLPLPEDY
AQQELRPIINMCVNEAVSQKA
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaatctggaaatacatccttcactggttttaatactgctacacaaagtagt
ccttttggtcaatctgcattcagtaaaccaattacaacaactagctttggaattggcacg
actccagtttttggcagtggtaatacttcactttttagttcaaaacctgctggttcttca
actagtgggttatttggcaatacaactaccccaccagcatttcgacaacaaactaacgct
cagccttcttttggagcttttggtactaccaatacaaatactaatctgtttggtacacaa
caaaatgcaaccccaaatctttttgggacaagtacagcaacgtctgcttttggtcaagga
aataaaacaggtggattcagttttagcaccccagcttccagtaatttatttggtcagcca
caacaaccatctcaacaagttactccttttggtcaaactaatgcaactggaaacacaaat
ctctttggtgcaactactggttttagtaacacacctgctaatacagctataacagggact
gtagtaaaatttacacctgttataactacggattcaatgacaaaaaatggtacagctcat
agtatatctggaagacattgttgcattgttgctatgaaggaatatgagtccaaatcatat
gaggaattacgttttgaagattattcagttggtcgaaaaggtccacaaggtccacaagga
ccaagtactgggctttttggagcatcagcacaaccatctccttttggaaatacagcagct
ggtactagtactgcagcaacaggttttagtggaatgagtggaggttttggcactaccagt
caatctggatcaaatagtcttttcggtaaaccaatggcaaattttggaggacaaccagca
acaacagcaaatacttttgcatttaattctacgaccaacacaaatctttttggcaataat
acacaagctaaaccttttggtacagctgctccaacatcactttttcaaaccagcaatgct
aatcaaactgctggcacaggttttggtaacattaatactacacctaatacaggttttgga
tctacatttggtactgctcaacctaatcagacaattggattatttagtcagaataagtca
gcctttaatataccttcgacatcatccggaactggttttacaacttttggacaaacatct
gtaagcaacagtgggacatctctgtttaatgcaaaacctgctatgactggatttggagtt
tcaacgtttggttcaacaccggcacctttgagctttgggactaatacaggtttcaataca
ggccaaaattctgggaattcgctatttaattcatcatttaaacctgcaggacaaactcct
ggtttttcttttggttcaactggaacaccttctacgggtcttggcaccaatacaggctta
aatttgggtggtagttcaacactatttggccaacaaaagccaagtggagtttttggaaat
acaggaaatactacaacatttaataatcctggttcatttggaacatctttttcctttggt
acaaataataatacaatgtctggacaaggaactggtttactcagtgggttagcaccgaat
caagtaaaaaattctggtactgttcctgtacatcaacaaattttagcattggtatcagca
ccttttggtgactcacctttattgaaaaacctattaccagcttctggaaaaacagaagag
cttttaaaaccgacaaatgcaacatcaaaaatattgagcaattcacaatacaaagtcgcg
actaacaataaatcaccaaaaattaaaacaagaattgttagtactgctcagttgtccaag
aaatcattatttgaggggcttgaagaagaagacccagtattatctgaggcatttcaacca
cgtccaaatgctaaacgattggtattacgaccaaaaccaattacaaattctacaacgcag
tcattaaatgagaattctgaatctcatacgaaaaatgatagcagggaagagagaatagat
aattccaatgtacacaatagcagtattgaggctattgataaagaaaacaaaaatttagaa
acaaataggcaattttcagctgatagaaaatcatctacgtcatggttgaagtcatctctt
ccacgaaaaggaagagtattatgtgatgacgaattattcgaaggacaacggtctccattt
tctgaaacaaataattcgcaagaaataattaataatacaataactgagttaaatcctcac
catagtataaataatcaaactgacccagatttatctaatttaacagagacacctttgagt
gcatcgttgggtgatagaagttctattgatttgattacacaaaatacagataccagtcaa
gaattagatacaaattcaatgtctacatcacaaaataattggtctactaatttggccaaa
gtaacgcttcaacgagtggggtattatacaattcctacacttgataaattagatgattat
gtttgtggagaaacttgtgtagtgcctaactttactgtaggacgtgaaggatatggcaat
gtattttttccagaatcatttgatatttatggcttaaatttagacgaaatagtatatttt
cggcacaaagaagttattatttatccggatgacgaaaagaaaccaccagtcggtcaaggt
ttaaatcgaaaagctcaagttacattggatagagtatggccacatgataaaactcgacat
gaaccaattactgatccacatagaatagctgccatgaattatgaggcaaaattgcgtaaa
gtatcagcgaaacacgatacgaacttccttgaatatcgtccagaaactggatcatgggta
tttaaggtcgatcatttttcaaaatatggtttaagtgattcggatgaagatgataataat
gtgccacctaaatcagatgtgaaaaaattaaaaattacgaatttgcaacaaaagttacct
gaaaaagtggagcaacaaaagtctataaataaaaatgccaccaccacgatagaaaatcac
gttaaagcaggagagtcgcgactttcaaatttagagtgtgattttttaggaacggatcct
gattctccaacttacagacatcgtaatgacgagaaaaaattattaattagtcctacaaca
gcttatgcacgtattactggcacagattctcataaattacagttgatgaaagcaagtttt
tttgatacggccgaagaagaaatggatcaagaatcagtccatgatactttaccagtttta
ccagcaaaagatctatcaaataatttttttaacgccgggacaaaaatcgatcgacatagt
attgcgactatttatacaccaatattacgatcaaattttatatcgtcacaaacatcatta
tcaacgaatgaagaacaaatgctacatgaaacaaatattcgttcaaaatcaaaattatca
aatgaaaatactggtgctcaaacatttgttcttacaaaatcttttcctgatccttcgata
gcaccaataactaaagtgatgagatgtcattcagaagtaattccactttcggaatctatt
ctgaataaattacactttcgttgcgctgcagattttggtatacaaatgggtagagtgttc
aaatcaagttggggtatgggattaacattactttctttaagtacacaagaacaagcagct
aaaataccactgcagaatacatttgatcagttaggatcttatgtatgtggtcgtatacca
ggtgatacaacttcaatgaatgttgtgcaacgtttacaaattttgggaggtaatggagca
gaaccagaatatattcagatgtttaaggaaagtatagaaggacatttaaaaattcaactt
gccaattgtattatgggacacgaaggagattgtccaacttttaatgtagcaacagaaaca
gcaagtactactttaagcgctcatagcaaattagctcaagaactagctgatcaattctct
tcagattttatgatggtatatactaaaacagtcttcaaattatgtgtggcactttgggga
gatctccctgatataaacatatccactggaaatgcaaaacatcataatgtaatggtaaga
aaagaagctgtaggtgaatggctccaaagtgtagttaaagaaactgtagagaaagaaatt
gctgaaattgatatggatgataaaataatactttcgttgcttactgcactaagattggaa
gaagcatgtcagattgctagaaaagtaggagatcactgcttagcactattaatggcacaa
ttacgaagtggattacctgtaaaagaaatggtgaaacaacaacttgcagtatggcaagat
ttggatgttgatgaaaatctttctatcaatcgcttaaagttatttactctgatagcgggc
gagcctcttatttctagtaaacatggtaccattaacacttgtgaaggacttgattggaaa
agagccttagctgttcacttgtggtatttgtcttctccaactgcttcaataacagatgtt
ttggatctatacgaagcatcattcaatgttgatcctactgaagcatattcagtaatacca
gagcctgaatataaaagcaatggatatgatccagaaacaaataataaaaaatcagtacat
gatttatgctttcatatattgaaattatattgtactggaaatcattccttagaaaaactt
ttgaatccattaacatatactctagatccatttgattacagacttagttggttaatgcaa
caaacattactcagtttgggttattcacatctttcggaatatgttacatcattgacacat
attaattttgcaactcaattagaaggatatggcttatggcattgggctatttttgtaata
ttacatttacgagatgctggacgaagacgtactgcagtattagatttattagcaagacat
gtagaaatagatgacattcctgaatatgttaaacaagaagaatttttaaaagaagaatta
ggcataccatcagcatggattcatcaagccaaagccatgaaaagtcgtgttagtaaaaga
tatggagaagcagcatggtattttatacaagctgaagagtggaatatggctcatgaaatt
atcattgaacatttagcagctgatgctataataaatgaaaattatgaatatcttcaatct
ttgcttaacccattggtacctgaagaatgtagcagtataattagcaattggcctaatcaa
ggacaattgctttgggattatatagaaattactactcaaatccaaaatttattaaattct
tccgattcttgtgcaataaactataaattggaattactaaaacctagattgacatcatta
tgttcgaaaatagatcaatttccttgtctaactgctaagcacagattgtgtcaagccgaa
attgcaaaaagaaccttacatgtagctaaaaatttgcttatattacaagcaaacgaaaat
acatctatgttaaaggtattagtttatctaatctcgcaattaccgttaccagaagattat
gcccaacaagagttacgtcctattatcaatatgtgtgtaaatgaagcagtttcacaaaaa
gcatag
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