Vespula pensylvanica (western yellowjacket): 122630456
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Entry
122630456 CDS
T07720
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03030
DNA replication
vps03410
Base excision repair
vps03420
Nucleotide excision repair
vps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122630456
03410 Base excision repair
122630456
03420 Nucleotide excision repair
122630456
03430 Mismatch repair
122630456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vps03032
]
122630456
03036 Chromosome and associated proteins [BR:
vps03036
]
122630456
03400 DNA repair and recombination proteins [BR:
vps03400
]
122630456
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122630456
DNA Replication Termination Factors
ELG1-RFC complex
122630456
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122630456
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122630456
Check point factors
HRAD17(Rad24)-RFC complex
122630456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_14
AAA_16
RuvB_N
AAA_5
AAA_assoc_2
AAA_11
DUF815
ResIII
AAA_24
DEAD
AAA_19
AAA_7
AAA_30
RCF1-5-like_lid
PhoH
ATPase_2
TniB
Sigma54_activ_2
Mg_chelatase
TIP49
nSTAND3
MCM
bpMoxR
NPHP3_N
AAA_2
AAA_3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122630456
NCBI-ProteinID:
XP_043670890
LinkDB
All DBs
Position
7:complement(1094353..1096645)
Genome browser
AA seq
328 aa
AA seq
DB search
MASDNETTTNLPWVEKYRPKKLEELISHEEILKTIKKFIDENQLPHLLLYGPPGTGKTST
ILACAKKLYKPAQFNSMVLEMNASDDRGIGIVRGQILNFASTGTMYRSGFKLIILDEADA
MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTKFRFGPLQSEQILPRLNEV
IEQENLKVTDDGKQALMTLCGGDMRKVLNILQSTWLAFGSVTEETVYSCVGHPLPVDIRN
ITNWLLNESYELSYCKIQDLKIKKGLALQDILTELHLFVHKIEFPDYILINLVIKMAEIE
KRIAVGCSEAVQLNALVAAFHQAREIDL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgataatgaaacgactacgaatttaccatgggttgagaaataccgacctaaa
aagttggaagaacttatctctcatgaagaaatattaaaaacaattaaaaaattcattgat
gagaatcaacttcctcatcttctactttatggaccaccaggtacaggaaaaacgagtact
attttagcttgtgcaaagaaactttacaaacctgctcaatttaattctatggtattagaa
atgaatgcatctgatgatagaggaataggtatagtcagaggccaaattttaaattttgcg
agtacgggtaccatgtatagatctggatttaaattgattattctcgacgaagcagatgca
atgacaaacgacgctcaaaatgctcttagaagaattattgagaagtatacagaaaatgta
cgtttttgtattatatgtaattatcttggtaaaattataccagctcttcagtcaagatgt
actaaatttagatttggccctttacaatcagaacaaatcttaccaagactaaatgaagtt
atagaacaggaaaatttaaaagtaacagatgatgggaaacaagcactaatgacattgtgt
ggtggagatatgaggaaagtattaaatatacttcagagtacttggttagcttttggatca
gttacagaggaaacagtatattcttgtgttggacatcctcttccagttgatataagaaat
attacaaactggttgttaaatgaatcttatgaactatcctattgtaaaatacaagatcta
aaaattaagaaaggactcgcgttgcaagatattctgactgaattgcatctatttgtacat
aaaattgaattcccagattacatactcataaatttggtgataaaaatggccgaaatcgaa
aaaaggatagcagtcggatgtagcgaggcagtacaattaaatgctcttgtggcggctttt
caccaagcacgagagatagatctttga
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