Vespula pensylvanica (western yellowjacket): 122630466
Help
Entry
122630466 CDS
T07720
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122630466
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122630466
Spliceosome [BR:
vps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122630466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
nSTAND3
AAA_19
AAA_22
HA2_N
Ank
PhoH
UvrA_inter
ATPase
Ank_5
T2SSE
AAA_14
AAA_16
Sigma54_activat
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
122630466
NCBI-ProteinID:
XP_043670914
LinkDB
All DBs
Position
7:7156187..7161228
Genome browser
AA seq
1154 aa
AA seq
DB search
MPRHKQRKQPLIGEDTRIAVNLTLKKLLETADQKELEFPSSYTAKERAYIHELVKELGLK
SKSRGKGKNRFLTVYKREGSTIVQADAIIKLQKSSKQSIYALLNNFPLNHKECQDLLPPM
ERERPLNADVITNTKAMGRLNSSIPQVPQLKTNFDVLNFRKSLPIFNAREDILNALATNQ
VVIIAGETGSGKTTQVPQYILEHCQQRHQICRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALTTVTHIIVDEVHERDRFCDFLLI
ALKDAMNKYRSLKIVLMSATLDTTIFAKYFDKCAVINIPGRLFEVETYFLEDVLRMTGYM
TKDMIKRKKEFLNKKEQCKVLESWTQYKPQVSSKGSLNERCLLPAPILAQQNEPIPEKVK
LEPWLVEEVDKSISDAWLCGGEDNFAQLLHFILSENVSVDYQHSKTLVTPLMVAAGRGCI
NTTEQLLNLGANLNFRAGNEWTALDWAKNMKQIECAELIEAYMKTYDCTVQDYEIIQGEN
ASISEEDKMLLDVYHHTFNDENIDHDLLLHLVIYVHLKMPSGSLLIFLPGYDDIVTMREK
INSEEKKMNQGLRYNLFVLHSNMQTCDQKKVFKPSAQGTRKIILSTNIAETSITIDDVVY
VIDSGKIKEKSFDAISGVCTLRSNWISQACAKQRKGRAGRCRKGFCYRLFSSIRFNNMQL
YQTPEILRLPLQELCLFTKHLAPGNTPIAEFLDRALEPPSNIITRNAVQLLKTIDALDPW
EDLTELGSHLLDIPIEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFILPAQPSQKRAV
AAARKKFATGTFSDHMAVLRAFQGWQNARASGKERSFCEKNFISAPVMEMVVGMRTQLLG
QLRASGFVRARGAGDIRDLNTNSENWAVVKAALTAGLYPNIIRVDRDHMQLRTQKEVKVF
FHPSSTLRDFPKSPRMTYAQTHAANVESLPSDWLLYEEMNRTGRFCHVKIVTLVNPLTVA
LFSGPARLPMDVIYEAGAIPESESDSEVDENHEDTIFKLDDWIVFKLDLETVQLFLNLRQ
KWNALFLRRMKAPGKPMSQLDEKVVNTLVTVLTNEEQACGLQQPSGIGQRPRPLIVDYYP
ANARRADDFVERNF
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccataaacaacgaaaacaacctctgataggagaagatactagaatagcagta
aacttaactttgaagaaattattggaaactgccgatcaaaaagaattagaatttccatct
tcttacacagcgaaagagcgagcttatattcatgaacttgttaaggagcttggcttaaaa
tctaaaagtagaggtaaaggcaaaaatcgatttttaacggtatacaagagagaaggatct
actatagttcaagctgatgctataatcaaattgcaaaagtcgtcgaaacaaagtatttat
gctttattaaataatttcccattgaatcataaagaatgtcaagatttattacctccgatg
gaaagagaacgacctcttaatgcagatgttattacaaatacaaaggctatgggtcgcttg
aacagtagtatcccacaagtaccacaattaaaaacaaattttgatgtattgaattttcgt
aaatcacttccaatttttaacgcacgagaagatattttaaacgctttggccaccaatcaa
gtagttataatagctggggaaacaggaagtggaaaaaccacacaagtacctcaatatata
ttagagcattgtcagcaaagacatcaaatttgtagaattatatgtactcaacctagaaga
ctttccgcagtatctgttgcagaaagagtggcatttgaaagggacgaaaaaattggacaa
acgtttggttatcaaattagacttgaaagtagagttgcacctaaaactcttctgacgtat
tgtactaatggagttcttcttaggacgcttatgggtggagactctgccttaactactgtt
acacacataatcgtggacgaagttcacgaacgtgataggttttgtgacttcctgttgata
gcattaaaagatgcaatgaataaatatagatcattgaaaattgtgctaatgagtgcaact
ttagataccactatttttgcaaaatattttgataagtgtgctgttattaatattcctggt
agattgtttgaagtagaaacatatttccttgaggatgttttgagaatgactggttatatg
actaaagacatgattaagaggaaaaaagaatttttaaataaaaaggagcagtgcaaggtc
ttagaatcttggacgcaatacaagccgcaagtatccagtaaaggttcgttgaacgaaaga
tgtttgttacctgcaccgatattagcacaacaaaatgaacctataccggagaaggttaaa
ctggaaccatggttggtagaagaagtagacaagagtatatcagatgcatggttgtgcggt
ggagaagataactttgcacaattattgcattttatactttctgaaaatgtttctgtggat
tatcaacattctaagacgttagttacaccattgatggttgctgcaggtagaggatgcata
aatactaccgaacaacttttaaatcttggagcaaacttgaattttcgagcaggtaacgaa
tggactgcgttagattgggcaaaaaatatgaaacagatcgaatgtgctgaattgatcgaa
gcgtacatgaaaacatatgattgtacggtgcaagactatgaaataatacaaggtgaaaac
gcttctatttctgaagaagataaaatgttattagacgtatatcaccatacgttcaatgat
gaaaatatcgatcacgatcttcttttacatctggttatatatgtccatttaaaaatgccg
tcaggttcattattaatatttttacctgggtatgatgacatagtaactatgagagaaaaa
ataaatagcgaagaaaagaaaatgaatcaaggtcttcgttacaatttattcgtacttcac
tcaaatatgcaaacatgcgatcagaaaaaagttttcaaacctagtgcccaaggaactaga
aagattattctttcgacaaatattgcagagacaagcattacgatcgatgatgtcgtttac
gtgatcgattcaggaaaaatcaaagaaaaatcattcgacgcaatatccggcgtatgtacg
cttcgttcgaattggatatcacaagcatgtgcgaaacaacggaaaggaagagctggcaga
tgtaggaaaggattttgttatcgtttattctcatctattcgttttaataatatgcagctt
tatcaaacacctgaaatcttacgattacctttgcaagaattatgtctgtttacaaaacat
ttggcaccaggaaatacaccaattgcagaatttttagatagagctttagagccgccctca
aacataataactagaaatgctgttcaattattgaagaccattgatgcgttagatccatgg
gaagatcttacggaattaggaagtcatttattagatataccgattgaaccaagattagga
aaaatgttgctatacgcggtagttttgaaatgtctcgatccaattctaacgatcgtttgc
agtttagcatataaagatccatttattctaccagctcaaccatcacaaaaaagggctgta
gctgctgcacgcaaaaagtttgccaccgggacattttcagatcatatggctgttttaaga
gcgtttcagggttggcaaaatgcgagggcgagtggcaaggaacgtagtttctgtgaaaaa
aattttatttcagcgcctgtgatggaaatggtagttggaatgagaactcaacttcttggt
caacttcgtgcatctggatttgttagagcgagaggtgctggtgacattagagatttgaat
accaattctgaaaattgggcggtcgttaaagcagctttaacagctggtttgtatccgaat
ataatcagagtcgatcgagatcatatgcaactaagaacgcaaaaagaagtgaaggtcttc
ttccatccatcatcgacgttaagagattttccaaaatctcctagaatgacttacgcgcaa
actcatgcagctaatgtagaatcattaccatccgactggttactttatgaagagatgaat
cgtaccggtcggttttgtcatgttaaaatcgttacgcttgttaatcccttgaccgtggca
ctttttagtggtccagcaagattacctatggatgttatttatgaagctggtgcaataccc
gaaagcgaatccgattccgaagtggatgaaaatcacgaggatactatttttaaattggac
gattggatagtattcaaacttgatcttgaaactgtacaattgtttttaaatttacgacaa
aaatggaacgccttatttttacgacgtatgaaagcaccaggaaaacctatgtcgcaatta
gatgaaaaagttgttaatacattagtaacggttcttactaatgaagagcaagcatgtggt
ttgcaacaaccttcaggaattggacagagacctcgtccattaatagtagattactatcct
gcaaatgctagaagagcagatgattttgtagagagaaacttttaa
DBGET
integrated database retrieval system
