Vespula pensylvanica (western yellowjacket): 122630467
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Entry
122630467 CDS
T07720
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03420
Nucleotide excision repair
vps04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122630467
09124 Replication and repair
03420 Nucleotide excision repair
122630467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vps04121
]
122630467
03400 DNA repair and recombination proteins [BR:
vps03400
]
122630467
Ubiquitin system [BR:
vps04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
122630467
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122630467
TCR (transcription coupled repair) factors
Cul4-CSA complex
122630467
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
122630467
NCBI-ProteinID:
XP_043670915
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All DBs
Position
7:3697163..3701828
Genome browser
AA seq
1141 aa
AA seq
DB search
MKAMSHHYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGI
YGKIAVIKFFRPPYERKDLLFLLTTRYNAMILECIGEGEDIEIRTRAHGNVADRIGKASE
TGIKAVIDPKARVIGLRLYDGLFKIIPLDKHNPELKASSIRMDEQQVQDVNFLHGCANPT
LILIHQDINGRHVKTHEISLRDKEFVKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESI
LYHDGTTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDLAGHLFMLFLEQEKKPDGTQVV
KDLKVELLGEISIPECITYLDNGVIFIGSRLGDSQLIKLITKADENGSYCVPMETFTNLA
PIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIKGMWALKIGG
GNFDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPSSARL
ISNESKSVVSEWEPTNKKTISVVACNGTQVLCATGNDLFYMEIIHGQIIPKGFATLQHEV
ACLDISPLDGSNEARVVAVGLWTDISVRILTIPILEEINKELLGGEIIPRSILMTCFEGN
TYLLCALGDGSMYYFTLHKLTGFLSDKKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGE
SPRRIAYQESSQTFGVITMRVDMQESSGVSIVRHSASTQAASTSSSSHIAAHNKPTGHTA
SEIGQEIEVHNLLIIDQHTFEVLHAHTLMPTEYALSLISTKLGEDPTSYYVVGTALINPD
ETEPRMGRILLYHWGDGKLTQVAEKEIKGSCYSLVEFNGKLLASINSTVRLFEWTAEKEL
RLECSHFNHIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTAIEI
LDDDTFLGAENCYNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNIFRHGSLVMQNLGE
SSTPTQGCVLFGTVSGAIGLVTQIPFAFYEFLRNLEDRLTSVIKSVGKIEHNFWRSFNTE
LKIEQCEGFIDGDLIESFLDLSHDKMAEVAMGLMIDDGSGMKKEATVDDLVKIVEDLTRI
H
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatgtctcatcattacgtggtgacggcacataaacctacagctgtcactgct
tgtgtgactggtaatttcacgtcaccaacggatctgaatttaatattagctaaaaacgta
cgattagaaatatatctggttactccagaagggttgaggcccttaaaggaagttggaatt
tatggaaaaattgctgtaataaaattcttcagaccaccgtatgaaagaaaagatttgttg
tttctcctaacaacaagatacaatgctatgattttggaatgtattggagaaggagaagat
atagagataagaaccagagcgcatggaaatgtagccgatcgtattggaaaggcttcagaa
actggtatcaaagctgttattgatcctaaagcacgtgtaataggacttagactatacgat
ggtctttttaaaattattcctttggataaacataatccagagttaaaagcatcgtcgatt
cgtatggatgaacaacaagtgcaagatgttaatttcttacacggatgtgctaatccaaca
ttgatcttaattcatcaagacatcaatggaaggcatgtaaaaacacatgaaatctcactg
agagataaagaatttgttaaaataccatggagacaagataatgtagaacgtgaagctatg
atggtcattcctgtgccttctccaatttgtggtgcaattataataggacaagagagtatt
ttatatcacgatggaactacatatgtagctgttgtaccgccaattattaaacaaagtact
ataacatgctatgccaaagtagacaatcaagggctcagatatttattaggagatctagct
ggacatttgttcatgttgtttttagaacaagaaaagaaacctgatggcacacaagtagta
aaagatttaaaagtagaacttttaggcgaaattagcattccagagtgtataacttatttg
gataatggtgtaatatttattggtagccgtctaggtgattctcaattgattaagttaata
acaaaggcagatgaaaatggatcttattgtgtaccaatggaaacatttacaaatctagca
ccaatagttgacatggctgttgttgatcttgaaagacaaggacaaggtcagatggttacc
tgttctggtgcttttaaagagggttctctcagaatcattagaaatggtattggtattcaa
gaacatgcaagtatcgatttgccaggcatcaaaggcatgtgggctcttaaaattggtggt
ggtaattttgataatacattagtactttcttttgttggccagacaagaattttaactttg
aatggcgaagaagttgaagaaacagatataccaggctttgttgcggatgaacaaaccttt
catactggaaatgtgactaatgatttatttattcaaattacaccaagctctgcaagattg
atttcaaatgaaagtaaatctgttgtatctgaatgggaacctacgaataaaaaaaccatt
agtgtagttgcatgtaatggtactcaagtattatgcgccactggtaatgatttattctac
atggagatcatacatggtcaaattattccaaaaggatttgctacattacagcatgaggta
gcatgtctggatatttctccattggatggaagcaatgaagcacgtgtagttgcagtaggt
ttgtggacagatatttctgttcgaattttaactatacctattttagaagaaataaataaa
gaattattaggcggtgaaatcataccaagatcgattttaatgacttgttttgaaggtaat
acatatcttctgtgtgcacttggagatggtagtatgtattactttactctgcataaactg
actggctttctctcagataagaaaaaagttacgttaggtacacagccaacagtactaaga
acttttaggtccttgtctactaccaatgtttttgcttgttctgatagaccaacagtcatc
tattcttcaaatcataagctcgtgtttagtaatgttaacttgaaagaagtaaatcacatg
tgttcattaaatgcagaatcatatccagacagcctggcattggctacagatagtactgta
actataggaacaattgatgaaattcaaaaattacacatacgaactgttcctcttggagaa
tcacctagacgaattgcatatcaagaaagttctcaaactttcggcgtcatcacaatgagg
gtagatatgcaagaaagcagtggtgtcagtattgttagacactctgcatccactcaagct
gcttcaacatctagcagtagtcatatagcagctcataataaaccaacaggacatacagcc
agcgaaattggacaagaaattgaagtccacaatcttcttattatagatcaacacacattt
gaagttcttcatgcacacacattaatgcctactgaatatgccttatcattaatatctaca
aaattaggtgaagacccaacttcttattatgtagtcggaactgcattaataaatcctgat
gaaactgaaccgagaatgggcaggatattattatatcattggggtgatggaaaacttact
caagtagcagaaaaagaaatcaaaggatcatgttattcattggtagaatttaatggaaaa
cttcttgcaagtatcaatagtacagttcgtctgtttgaatggactgctgagaaagaactt
aggctagaatgtagtcattttaatcatattatagcactgtatcttaaaaccaaaggtgac
tttgtcttagttggagatcttatgagatctttaacacttcttcaatacaaaactatggaa
ggtagttttgaagaaatagccagagattacaatcctaattggatgacagctattgaaatt
ttggatgatgatacatttttgggagctgaaaattgctacaatctctttgtttgtcaaaaa
gatagtgcagctacttctgaggatgaaagacaacaaatgcaagaagttggtcaatttcat
ttaggtgatatggtaaatattttccgccacggttctttagtaatgcaaaatttgggtgag
tcaagtacaccaactcaaggttgtgtactatttggaactgtaagcggtgctattggttta
gttactcaaattccatttgcattttatgagtttcttcgtaatttggaagatagattaaca
agtgtaattaaaagtgttggcaaaattgaacataatttctggagaagctttaatactgaa
ttaaagattgaacaatgtgagggtttcatagatggtgatttaatagagagctttcttgat
ttaagtcatgataaaatggcagaggttgccatgggtcttatgatcgatgatggtagcggt
atgaagaaagaagcaacggttgatgatctcgtaaaaattgttgaagatttaacaagaata
cattaa
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integrated database retrieval system
