KEGG   Vespula pensylvanica (western yellowjacket): 122630508
Entry
122630508         CDS       T07720                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
vps  Vespula pensylvanica (western yellowjacket)
Pathway
vps03030  DNA replication
vps03410  Base excision repair
vps03420  Nucleotide excision repair
vps03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122630508
   03410 Base excision repair
    122630508
   03420 Nucleotide excision repair
    122630508
   03430 Mismatch repair
    122630508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vps03032]
    122630508
   03400 DNA repair and recombination proteins [BR:vps03400]
    122630508
Enzymes [BR:vps01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122630508
    6.5.1.6  DNA ligase (ATP or NAD+)
     122630508
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     122630508
DNA replication proteins [BR:vps03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122630508
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122630508
DNA repair and recombination proteins [BR:vps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122630508
   NER (nucleotide excision repair)
    Other NER factors
     122630508
   MMR (mismatch excision repair)
    Other MMR factors
     122630508
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 122630508
NCBI-ProteinID: XP_043670996
LinkDB
Position
7:4970194..4974571
AA seq 892 aa
MLKLITFYARTFPLSTLLNPRFALERQVHRIILNSSFNCLYINTSVKHAKELTSGKGKEK
GKRKRQDSPNNKNSTRSPESITKNEDQEDANDSMQERKKNKKSNTPKKATKKSIKVKEQQ
LDSSAELESSIVQESTKSIKKNEKEENKVLGVSQLDNSKNNESYESSIDSSDEGDHEEKK
NISGKKSDSESNSDSESEREVSKRSKITKKTNKNYFFAPKENKSPKSNKDDNKTSTVDLY
DPSATKYHPINDACWKKGEMVPYIALTRTLELIEETSARLKIIDILSNYFRSVIVLSPND
LLPSIYLCLNQLAPAYEGIILGVAETNLLKAIAQCTGRTLAQLKVDVQNVGDIGIVAEGS
RSNQRTMFQPAPLTVSRVYTTLKEIAQMIGHSSLSKKLDKIQTLFVACRFTEARYFIRSL
AGKLRVGLAEQSLLQALALACTKTPPEQNYPFKTLNVSKNMSRENFKQKYDEIALVIKTT
YCECPNYDLIIPVLLKEGVQSLPERCKITPGVPIKPMLAHPTKGVQEVLTRFEGLKFTCE
WKYDGERAQIHLKDNGEISIYSRNQENNTSKYPDIIARFKNTRKDNVTNCILDCESVAWD
KENKQILPFQVLSTRKRKDANEADIKVQVCVFMFDLLYLNNESLVQKPFLERRQLLKEYF
VEVEGEWKFATNLDTSKIEEVQDFLEESVKGNCEGLMVKTLEKEATYEIAKRSRNWLKLK
KDYLDGMGDTLDLVVIGGYIGKGKRTGTYGGFLLACYDKENEEYQSLCKIGTGFSEEDLQ
KHTQFFKEHLISQSKSYYRFDSSHEPDHWFEPIQVWEIKCADLSLSPVHRAAIGIVDSEK
GISVRFPRFIRVRDDKNCEDATTAQQVAEMYNNQEQIKNKTTDAKTTEEDFY
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgttaaaattaataacattttatgcacgaacatttcctttgtctaccttattaaatcca
cgttttgctcttgaacgtcaagtgcatagaatcattttgaacagtagttttaattgtttg
tatattaatactagtgtcaaacatgcaaaggaattaacttctggaaaaggaaaagaaaaa
ggaaaacgaaaacgacaagacagtccaaataacaaaaattcaactagatctcctgaatca
attactaaaaatgaggatcaagaagatgcaaatgattcaatgcaagaaagaaaaaagaat
aaaaaatctaatacacctaaaaaagctactaaaaaatcgataaaagtaaaagaacagcaa
ttagattcaagtgcagagttggaatcaagtattgtgcaagaatccacaaaatctataaag
aaaaatgagaaagaagaaaataaagttttaggagtgtctcaattagataattctaagaat
aatgaaagttacgaatcttcaatagatagttcagacgaaggagatcacgaagaaaaaaaa
aatatttctggaaaaaaatctgatagtgaatcgaacagtgattcagaaagtgaaagagaa
gtttcgaaacgatctaaaattaccaaaaaaactaataagaactatttctttgcacctaaa
gaaaataaatctcccaaatctaataaggacgacaacaaaacatctactgttgacctttac
gatccaagtgcaactaagtatcatccaataaatgatgcttgttggaaaaaaggtgaaatg
gtaccatatattgcactaactagaactttggaattgatagaagagacaagtgccagatta
aaaataattgacatattatcaaattactttcgttccgttatagttttaagtccaaacgat
ttattaccaagtatatatttatgtttgaatcaattagcacctgcatacgaaggtattatt
ctaggagtggcagaaacgaatcttttgaaggcaatagcacagtgtactggtcgaacactg
gctcaattaaaagtagatgtacaaaatgttggtgatattggcattgtggctgaaggaagt
cgttcaaaccaaagaactatgttccaaccagcaccacttacagtgtcgcgtgtatatact
accttgaaagaaatcgcacaaatgataggtcattcatctctttccaagaaattagataaa
attcagaccctttttgttgcatgtcgtttcactgaagctagatactttattagatcttta
gctggcaagctacgagtgggtttggcagagcaatctcttttgcaggcattggcattagca
tgtactaagacaccacctgagcagaattatccatttaaaactttaaatgtcagtaaaaat
atgtcacgtgaaaatttcaaacaaaaatatgatgaaattgctcttgtaatcaaaactacc
tactgtgaatgtcctaattatgatttaattataccagtgttactaaaagaaggggttcag
tctctaccagaaagatgtaaaattactccaggagtacctattaaacctatgctggcacat
cctacaaagggagtccaagaagttttaacgcgatttgaaggcttaaagtttacatgcgag
tggaaatacgacggtgaaagagcacaaattcatctgaaggacaatggtgaaattagtatt
tacagtagaaatcaagaaaataatacttccaagtatcctgatataattgcacgtttcaaa
aatacacgaaaagataatgttactaattgtattctcgactgtgaatcagtagcctgggat
aaggaaaataaacaaattcttccattccaagtattgagtacccgtaaacgcaaagatgct
aacgaagcagatatcaaagtacaagtctgtgtatttatgttcgacttattatatttaaac
aacgaatctctcgttcaaaaaccatttttagaacgtcgtcagcttttaaaagaatatttc
gtggaagtggagggagaatggaaatttgctacaaacttagatacttcaaagatagaagaa
gttcaagactttttggaagaatctgtaaaaggaaattgtgaagggttaatggttaaaaca
ttagaaaaagaagcaacgtatgaaattgctaaacggtctcgaaattggttgaaattgaag
aaagattatttagatggaatgggtgatacattagatttagtagtaattggtggatatatt
gggaaaggaaagagaactggtacttatggaggttttcttttggcttgctatgataaagaa
aatgaggagtatcagagtttgtgtaaaatcggaactggatttagcgaagaagatcttcaa
aagcatacgcaatttttcaaagaacatttgatatcacaatcgaagtcgtattatcgtttc
gattcaagtcacgaaccggatcattggttcgaacctattcaagtttgggaaataaaatgt
gcagatctttctttgtcacctgtccatagagccgctatcggaattgttgattcggaaaaa
ggcatatcagtacgattcccacgatttatacgtgtacgtgatgataagaattgtgaagat
gctacaactgcacagcaagtggcagagatgtacaacaaccaagaacagataaaaaataaa
acgacagatgcgaaaacaacagaagaagatttttattaa

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