Vespula pensylvanica (western yellowjacket): 122630948
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Entry
122630948 CDS
T07720
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vps01009
]
122630948
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122630948
04131 Membrane trafficking [BR:
vps04131
]
122630948
03036 Chromosome and associated proteins [BR:
vps03036
]
122630948
Enzymes [BR:
vps01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122630948
Protein phosphatases and associated proteins [BR:
vps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122630948
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122630948
Membrane trafficking [BR:
vps04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122630948
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122630948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
NuDC
zf-UBP_var
STAT_int
Motif
Other DBs
NCBI-GeneID:
122630948
NCBI-ProteinID:
XP_043671959
LinkDB
All DBs
Position
8:4771309..4778863
Genome browser
AA seq
1161 aa
AA seq
DB search
MTIHSSGRDSKTGVEGNLFDAVRQLAESEIQLIKAIEESTMDCQRNTTDMKSTTKKKNIK
KSPKLSNVRPSAALLAAKQEAVQRKILHNKKSNTNFVHDIYQKIRDAYSVMHKETGIVYD
HSMEDHRCLWDDNYPECPDRLTRILERCKELGLLNRCKLISTRFCTENEILKMHSQKQID
ILKSTSGCMDPDKLETLSSKYDAIYVHPSTYKLSLLAVGSTISLVESICKGDIQNGMAII
RPPGHHAMKSEYCGYCFYNNVAIAAEKALNDNLANKILIVDWDVHHGQATQQMFYDDSRV
VYFSIHRYENGTFWPNLEESDFHYIGKGLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPM
AYEFQPDLIIVSAGYDAALGCPEGEMEVTPACYAHLLSSLLSLAAGKVAVVLEGGYCLKS
LAESAALTLRTLLGDPCPMLQTLQLPSLSIRDTILNSIYAHKQFWKCYQYQEQYSINNRI
DRKEENNDQYLPVVNYEGEVYKPDIYKTRNCYPVQSKEILEALDKKLDSLIKFTNLSKAL
NKVCIVYDNRMLKHCDTINNTHPEKPNRILSIYKKHEEHGLLERCYLQQGRVATEEEILL
AHSQDYIHAIKKTETFKSKELERQALKYNSVYLHNETWFSACVSVGSLLEIVDNVLNGQA
QSGVAIIRPPGHHAEPDQACGFCIFNNVAIAAKYAVNIHNVKRVLIVDWDVHHGNGTQSI
FESDPNVLYISIHRYDNGNFFPHSKYGNYTSVGSGLGEGYCVNIPWNKKGMGNAEYIAAF
QQVVMPIAYQFNPDLVLVSAGFDACIGDPLGGCTVTPEMYGHLTHWLSSMANGRIILSLE
GGYNINSISHSMAICTKALLGDPLPLLDASLVPCSSAIHSINNVLKTQKKYWPNLMFNLS
LPKENLTKIATYKKMDEQVRNSKFNEHSESKIALEGIENEKLDIKLSFDKNSMNLVTDEE
ILKLQNEIENIKIKNSKTMKEVTTTEIARTCVNKDQQKERQRRETAGSSNNAGSSNDLGE
NRGIYDGATSLTDYLSDNLQALIAGEMFAVIPLRDCPHLDTVNDVPSRGIDVHLPCMECG
SSVENWICLQCYTVHCARNINQHALLHADETQHPLTLSFSDLSVWCYGCEAYIDNPRLYA
ARNAAHQSKFNQESPWTYEEQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacattccagtggaagggattcgaaaactggagtagaaggaaatttgtttgat
gctgtgaggcaactagcagagagtgaaattcaacttatcaaagctattgaggaatctacc
atggattgtcaaagaaatactacagatatgaaatctacaacaaaaaaaaagaatatcaag
aaatcacctaaactctcaaatgttcgaccatctgctgctttattggcagcaaaacaagag
gcagtacagcgtaaaatattacataataaaaagtctaacacaaactttgtgcatgacatc
tatcaaaagattagagatgcatatagtgttatgcataaggaaactggtattgtttatgat
cattctatggaggatcatagatgtttgtgggatgataattatcctgaatgtccagataga
ctaacaagaatcttagaaagatgtaaagaattaggattattaaatagatgtaaattaatt
tcaaccagattttgtacagaaaatgagatacttaaaatgcacagccaaaaacaaatagat
atattaaaatcaaccagtggatgtatggatccggataaattggaaacattgtcttccaaa
tatgatgctatatatgtacatccatccacttataaactatctttattggctgtgggttca
acaataagtttggtagaaagtatttgtaaaggagatatacaaaatggcatggctattatt
agaccacctggccatcatgcaatgaaatctgaatattgtggatattgcttttataataat
gtggctattgcagcagaaaaagctctaaatgataatttagcaaataaaattcttattgtt
gattgggatgtacatcatggacaagctactcaacaaatgttttatgatgattcacgtgta
gtttatttttcaatacatcgttatgaaaatggaacattctggcctaatttagaagaatct
gattttcattacattggtaaaggtttgggagaaggttataattttaatataccacttaac
aaaactggtatgacaaatgctgattatattgcaatatttcaacaagttttgttaccaatg
gcttatgagtttcaaccagatctcataatagtctcagctggttatgatgcagcactggga
tgcccagagggtgaaatggaagtaacacctgcatgttatgctcatctattatcatctcta
ttgagtctggcagctgggaaggtagctgtagtgctggagggcggttattgcttaaaatca
ttggctgaaagtgctgcattaactctgcgaacattattaggtgatccatgtcctatgttg
caaacattgcaactaccatcattaagtatacgtgacacgattttaaattctatctatgct
cacaaacaattttggaagtgttatcagtatcaagaacaatatagtattaataatagaatt
gacagaaaagaagaaaataatgatcaatatttaccggttgttaattacgagggagaagtg
tataaaccagatatttataaaacaagaaattgttatcctgtacagagtaaagagattctt
gaagcattagataaaaaattagattcattgataaaatttacaaatttatccaaagcactt
aacaaagtatgtattgtatatgacaacaggatgttgaaacattgcgatactattaataac
acacatcctgaaaagccaaatcgaattttaagcatttataaaaaacatgaagagcatggt
ttactagaacgatgctatttacaacaaggaagagtggcaacagaggaagaaatattatta
gctcattcacaggactacattcatgcaataaaaaagacagaaacatttaaatccaaagaa
ttggaaagacaagcattaaaatataattctgtttatttgcataatgaaacatggttttct
gcttgtgtatctgttggttcattacttgaaattgtagacaatgtattaaatggacaagca
caatctggagttgcaataataagacctccaggacatcatgcagaaccagatcaagcatgt
ggtttttgtatttttaataatgttgcaatagcagcaaaatatgctgtaaatattcataat
gtaaagagggtattaatagtagattgggatgtacatcatggaaatggaactcaatctatt
tttgaaagtgacccaaatgtactttatatatccattcatcgttatgacaatggaaatttt
tttccacattctaaatatggcaattatacttctgttggctcagggttaggagaaggttat
tgtgtaaatataccatggaataaaaaaggaatgggaaatgcagaatatatagctgcattt
caacaagttgttatgccaattgcttatcaattcaatccagatttagttttagtctctgca
ggttttgatgcttgtattggagatccattaggaggatgtacggtaactccagaaatgtat
ggacatttaacacattggttatcttccatggcaaatggacgtattattcttagtctggag
ggaggttataatataaattcgatttctcattcaatggcaatatgtacaaaagcattactt
ggtgacccattacccttgttagatgcttcattagtaccatgttcaagcgcaatacattct
ataaataatgtattaaaaacacaaaagaaatattggcccaatttaatgttcaatttatca
ttgccaaaagaaaatctcacaaaaattgctacttataaaaaaatggatgagcaagttcga
aattctaaatttaatgaacattcagaatcgaaaattgctctagagggtattgaaaatgaa
aaattggatatcaaactttcctttgataaaaatagtatgaatttagtaacagatgaagag
atattgaaacttcaaaatgagattgaaaatataaaaattaagaattcaaaaactatgaag
gaagtgacaactacagaaatagctaggacatgtgtaaataaggatcaacaaaaagaaaga
cagagaagagagactgcaggaagttctaataatgcaggaagtagtaatgatcttggagag
aatagaggaatttatgatggagcaacaagtttaactgattatctctctgataacctccag
gcattaatagctggcgagatgtttgctgttataccattgcgcgattgtccacatctagat
actgttaatgatgtaccttctcgtggtatcgatgtacatttaccatgtatggaatgtggt
agcagtgttgaaaattggatttgcctacaatgttatactgtacattgtgcaagaaatatc
aatcaacatgcattattacatgctgatgaaactcagcatcctctgactctaagttttagt
gatttatcagtctggtgttatggatgtgaagcttatatcgacaatccgagattatatgca
gctcgaaatgcagcacatcaaagtaaatttaatcaagaatcaccatggacttatgaggaa
caatga
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integrated database retrieval system
