Vespula pensylvanica (western yellowjacket): 122630983
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Entry
122630983 CDS
T07720
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122630983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122630983
03009 Ribosome biogenesis [BR:
vps03009
]
122630983
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122630983
Spliceosome [BR:
vps03041
]
Complex A
U1 snRNP components
U1 related factors
122630983
Complex B
122630983
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
Helicases
122630983
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122630983
NCBI-ProteinID:
XP_043672047
LinkDB
All DBs
Position
8:complement(6094325..6100038)
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AA seq
614 aa
AA seq
DB search
MYNRDRDQGRSRRGGGGRGNNRGSSDNGRGNVNSRFNGRGRGSSVSTGRGGLKGKQPGGS
LRKVNWDARSLEPLRKDFYIEHPAVRNRSKEEVAQFRENAEITVKGVNIPNPIQYFEEGN
FPPYVMEGIRRQGYSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RLSKGDGPIALILAPTRELAQQIQEVANCFGESAAVRNTCIFGGAPKGPQAHDLERGVEI
CIATPGRLIDFLERETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQILMWSA
TWPKEVRALAEDFLTDYTHLNIGSLTLSANHNIVQIVDVCQEFEKDIKLYRLLQEIGTEK
ENKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDV
AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL
REAGQNINPRLSEMAEMAKSGNFGNRSAKRFCSSGSLDRSGGRRGNIDCRGGRGSGTLRG
RGSIRSNNSYQSGSSGYSGSDYTNYSNLKQNNSISPNTGYGYTTQRSYSQNNMSQVYGGN
DNYGNNYQYRGAAY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtataacagagacagagatcaaggcagaagtcgcagaggaggtggtggtagaggaaat
aatagagggagtagtgataatggtcgaggaaatgttaatagtcgatttaatggacgagga
agaggaagtagtgttagtactggacgaggtgggctaaagggcaaacaacctggaggaagt
ttaaggaaagtaaattgggatgctcgttctttagagccattgcgaaaggatttttatatc
gaacatcctgctgttagaaacaggtcaaaggaagaagttgcacaatttcgtgaaaatgct
gaaataactgtaaaaggagttaatattcctaatcctattcagtattttgaagaaggtaat
ttcccaccttatgtaatggaagggatccgtaggcaaggatactcacaacctacagcaatt
caagcacaaggatggccaatagcgcttagtggtagagatcttgttgcaattgcacaaact
ggttctggaaaaacacttggatatattttacctgcaattgtgcatattatacatcagcca
cggttaagtaaaggtgatggtccaattgcattaatattggctccaacaagagaacttgca
caacaaattcaagaagttgctaattgttttggtgaatcagcagctgtaagaaatacatgt
atttttggtggtgcacctaaaggaccacaagctcatgatttagaaagaggtgttgagata
tgcattgctacaccaggtagacttattgactttttggagagagaaactacgaatttacgc
agatgcacttatttagtgcttgatgaagctgatagaatgttagacatgggatttgaacct
caaattcgtaaaataatcgaacaaatacgacctgacaggcagatattgatgtggtctgca
acatggccaaaagaagtgcgagctttggctgaagactttttaactgattatacccatctt
aatattggatcattgactttatcagccaatcataacattgtacaaattgtagatgtttgt
caagaatttgagaaagatattaaattatataggctacttcaagaaattggaactgaaaaa
gaaaataaaactataatattcgtagaaacaaaacgaaaagttgatgatattacaagaaat
attagaagagatggatggcaagctttaagcattcatggtgataaaaatcaacaggaaaga
gatcatgtgttgcaggaatttcgtagcggacgagcgccgatcttggttgcaacagacgta
gctgcaagaggtttagatgtggatgatgtcaaatatgtaataaattttgactacccatca
tcatcagaagattatatacatagaatcggtcgtactggtcgtagacgacaaacaggaaca
gcttatgcattttttaccagtcataatatgaaacatgcaggagatctgatagaagtatta
cgagaagctggacaaaatattaatccaagattaagtgaaatggcagaaatggccaaatca
ggaaattttggaaacagaagtgctaaacgcttttgtagttccggaagtttagacagaagt
ggtggaagacgtggaaatattgattgtagaggaggacgtggtagtggtactctcagagga
cgaggaagtattcgttctaacaattcttaccaatctggatcaagcggttattcaggatca
gactatactaattatagtaacttaaaacaaaataattcaattagtccaaatactggttat
gggtatactacacagagaagttatagtcaaaataatatgtcccaagtttatggaggtaat
gataattatggaaataattatcaatatagaggtgctgcatattaa
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