Vespula pensylvanica (western yellowjacket): 122630986
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Entry
122630986 CDS
T07720
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vps03036
]
122630986
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
122630986
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122630986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122630986
NCBI-ProteinID:
XP_043672052
LinkDB
All DBs
Position
8:complement(7956400..7962088)
Genome browser
AA seq
1013 aa
AA seq
DB search
MDSNDEFCNNNCKVVIPETSFSIKVTNFKNPYCIRIYETKNYIKKSSLITTKLVKYMKKE
NLNSKNNDEPNLGDLVIVHGKVSQNVDLPAWFCRGIIGHFNPTTMKYNVLLIDHGISVTL
LKDDFISLQHDIISDKYLTSVIGIYNIIPTIIKKKESTNEFIQFVTNKWTNKAIKFIKEL
IIGSSIIYFDSLVCDEYGKYYGELYLVINNEIICLSKTLTENGYATYLKGDLLKLIKEPN
SKFKKESENNITTYYIRKVNDSNLHKNKDYMVNLNKCHSRESNAEYKERFHEKCSNTTIE
NRTRKVLVYSNILCKTLNFVTDAQFPAKIHKAWDSLVQSSKPKKMQSYIWPAIKQKLDVV
AIGTKDSGKTFGYTFAITGLLAAQDSLPEGNKPSVLILCASSSEAFSVHSLFLEFLQSYD
NINTILAFTGKSYRSLAAEIYNGCQILVSTPRFLAKFMRTYKDLLNFDSLCHLILDSADV
ILDKYYASIVELFGKHKIIKNRENQNDELFPLQIIFAARYFTTPIRTLVQKVMYNPYICI
TSFLEAVIFKSVQPKMYLINSKFKLQKILDVLDNENKLKTMIICTTIDEAEELNAFLLKH
KQILLAHEKKHLFEIQAIKEVWEISIPGHYPIIISTDEVLSDLNITDVDWLIHYSVSLHV
QTKFNFRFSTLMNNLQKKTTKCKVTIFVNENDNIQFLSIINMMKRMGVVLSDDVLLNIER
ISMSLDKCKKEYPICDKVKSLGFCPNKSSCVFRHCILPDIDTPMTEIETGDKVKFIITYI
HNASHFSARVVEYVKASTLEKIEFSKNEYIMLTSKIQNFYGNIDNRRRSVNVNVGDIYGL
EDSIESFKRVQVLQIKDGKSSHFESMEIADVRCIDTGNILNDIKVQKLLWLPEELSKLPA
HIVEIFLVGIAPCDDEYEWNNCANEIAYDWFVKNLNQYSYIIGEVSLHLSNIIWANTLEI
GTKMIGRSDIVGLNLKTELINKHYAAVNKDHMQNIYTLCKKGGLIKNNKCDLE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaatgatgaattttgtaataataattgtaaagttgtaatcccagaaacatca
ttttctataaaagttacaaattttaagaatccatattgcataagaatatatgaaaccaaa
aattatattaaaaaatctagtcttatcactacaaaattagtaaaatatatgaaaaaggaa
aatttgaattcaaagaataatgatgaaccaaatttaggagatcttgtcattgttcatggt
aaagtaagtcaaaacgtggatcttccagcatggttctgcagaggaataattggccacttt
aatcctacgactatgaaatataatgttcttttaatagatcatggaatttcagtaacatta
ttaaaagatgattttatttctttacaacatgatattatatctgataagtatttaacatca
gttattggtatatataacataatacctacaattattaaaaaaaaagagtctacgaatgaa
tttatacaatttgtaacaaataaatggacaaacaaagctataaaatttataaaagaatta
attattggatctagtataatatattttgatagtttagtctgtgatgagtatggaaaatat
tatggagagttatatcttgttataaataatgaaataatatgtttaagtaaaactctaact
gaaaatggatatgcaacttatctaaaaggagatttattaaaattaataaaggaaccaaat
agcaagttcaaaaaagaatctgagaataatattactacttattatatacgaaaagtaaat
gatagtaatttacacaaaaataaggattatatggtaaatttaaataaatgtcattctaga
gaaagcaatgctgaatataaagaaaggtttcatgaaaaatgttcaaatacaacaatagaa
aatcgtacacgtaaagtattagtatacagcaatatattatgtaaaactttgaattttgtt
accgatgctcaattccctgcaaagatacataaggcttgggattcattagtgcaatcaagt
aaacctaaaaagatgcaatcatatatctggcctgctataaagcaaaagctagatgtggtt
gctattggaactaaagattctggtaaaacattcgggtacacttttgctattactggttta
cttgctgcacaagattcgttgcccgaaggaaataaaccatcagtattaatattatgtgca
tcgtcttcagaagcattcagtgtgcattcacttttcttggaatttttgcaaagctatgat
aatattaacacaattttagcctttactggaaaatcatacaggtcactggcggctgaaata
tataatggatgtcagatattagtttcaacaccaagattcttagcaaaatttatgagaaca
tacaaagatttgttaaattttgacagtctttgtcatttaattcttgatagtgcagatgtg
atattagataaatattatgcttctatagtggaattatttggaaaacataaaataattaaa
aatagagagaatcaaaatgacgaattatttccattacaaataatctttgctgcgagatat
ttcacaacaccgataaggacactcgttcaaaaagttatgtataatccatatatatgtatt
acttcattcctagaagcagtaatatttaaatctgttcaaccaaagatgtatcttataaac
tcaaaatttaaacttcaaaagattttagatgtattggataatgaaaacaagttaaaaact
atgattatatgtacaactatcgatgaagcagaagaattaaacgcgtttttattgaaacat
aaacaaatacttctagcacatgagaaaaagcatctatttgaaatacaagctattaaagaa
gtatgggaaatatctatccctggtcattatcctattataatatctactgatgaagtttta
tctgatttaaatattacagatgtagattggttaatacactattctgtttcattacatgta
caaacaaaatttaatttcagattttcaactcttatgaataacttacaaaagaaaacaact
aaatgtaaagttacaatatttgtaaatgaaaatgataatatacaatttttaagtataatt
aatatgatgaaacgaatgggtgtagtgctatcagatgatgtattacttaatattgagcgt
atatctatgtcattggataaatgtaaaaaggaatatcctatatgtgacaaagtgaaatca
ttaggattttgtccaaacaaaagttcttgtgtatttagacattgtattcttcccgacatc
gatacaccaatgacagaaatagaaacaggagataaagttaaatttataattacgtatata
cataatgcaagtcatttttcagccagagtggtagaatatgtaaaagcaagtactttggaa
aagatagaattttcaaaaaatgagtatattatgcttacatcaaaaattcaaaatttttat
gggaatattgataacaggaggagatctgttaacgttaatgtaggagatatttatggctta
gaagactcaatagaaagttttaaaagagtacaagtcttacaaattaaagatggaaaaagc
agtcattttgagagtatggaaatcgcagatgtaagatgtattgacactggcaatatatta
aacgatattaaggtacaaaaattattatggttgccagaagaattatctaaattgccagca
catatagtagaaatttttttagttggcatagctccatgtgatgatgaatatgaatggaat
aattgtgctaatgaaattgcttatgattggtttgtcaagaatttaaatcaatattcatat
attattggggaggtttctttacatttgagtaacataatttgggcaaatactcttgaaatt
ggaacaaagatgattggacgatccgatatagttggtcttaatttaaaaactgaacttata
aataaacattatgctgctgtcaataaagatcatatgcaaaatatatatacgttgtgtaaa
aaaggtgggttaatcaagaacaacaaatgtgatttagaatag
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