Vespula pensylvanica (western yellowjacket): 122632083
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Entry
122632083 CDS
T07720
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04120
Ubiquitin mediated proteolysis
vps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122632083
04120 Ubiquitin mediated proteolysis
122632083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vps04121
]
122632083
Enzymes [BR:
vps01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122632083
Ubiquitin system [BR:
vps04121
]
Ubiquitin ligases (E3)
U-box type E3
122632083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
122632083
NCBI-ProteinID:
XP_043674471
LinkDB
All DBs
Position
9:3373135..3380526
Genome browser
AA seq
1109 aa
AA seq
DB search
MSELSQEEMRRRRLARLVGLDNNCSTTNSSNNTGAISPSTPGPSKAFAGSIMSPAIQQQF
HNQEIPMEVEETSEKQCNTSGVDVDSGIENMEVEESDRKEQVPRSRTTSSSTEVTTDQIH
IVISRVLCVSWKESLEGTILLPEMAAYALIHKLTDVTDIINQAIMEVLYMFSRGEDPLKE
ITSEMSSDREDSPNSQASPLLSPVMTVPSYQLPTLPLPAGSKSLQPKSLIYLLDSYSRVA
IEERNHPKRSSIPPLSDVLSTLRAQCVQYSSLVLQGLIGISQTSVMPAYVTPLLHPMLSQ
SLPRGYLHELVARTHTNSSIFSKIFTPLLQGLYLSMQQASLVGNTHRRPIEALEELIEIR
CGPNGNIRPICRLITHQAQFLPDVMTNAAGRELTRTSFLGPFLSISVFAEDQPKVAEKFF
SGNPFTDKSMNLTLQQELESTRTSLHKMLHAILANSNCRDAMLAYLAALLHHNEKRAQIQ
TEEFSLAGDGFMLNLLSVLQMLSVKIKLDTIDPLYPFHPSSFVEIKNDTRLKLTSQEVTE
WLKELERTHKWVEAKFPTQCWFLTLHCHHIALLPALQKYQRKLRALRDLQKMLDELQASE
PQWKDAPFAGHNKELVKRWKQQLKRLGKSKSCADAGLIDPVLLRRCLHFYISVAEILLSL
LTQSLPGSPLPELPLSQEIPHRFTALPEWYVEDIAEFLLFTLQFCPTVIANNMDNSLITW
LLVVVCTPHCIRNPYLIAKIIEVLFVINPSVQGRTETLHDQVMAHPISKTLLASYLMKFY
TDVETTGSSSEFYDKFSIRYHISLILKSMWDSPVHRASIVNESNNGNQFVKFINMLMNDT
TFLLDESLESLKRIHEVQELMSDLNAWSALSEEQQQSRRRQLAADERQARSYLTLAKETV
AMFHYLTVDITEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLKVRKPQKYGWEPRTLLSQ
LVDIYLHLDCDNFAAALASDERSFCKELFTDAANRLQKSAIKTTTEIERFIALAERATVI
ARDNRARDEDYGDAPEEFRDPLMDTLMEDPVKLPSGIVMDKAVIIRHLLNSATDPFSRQP
LSEDMLTPMVELKERISIWKQQKKKPTNI
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaagccaagaagaaatgaggagaaggcgattagcacggttagtgggttta
gacaacaattgttcaactaccaactctagtaacaatactggtgcgatatctccaagtaca
ccaggtccatcaaaagcatttgcaggatctataatgtctccagctatacaacaacagttt
cataatcaagaaattccaatggaagttgaagaaactagtgagaaacaatgtaatacctct
ggtgtagatgttgactctggcattgaaaatatggaagttgaagaatcggatagaaaagaa
caagtgccacgttcacgtacaacaagttctagtacagaagtgaccactgatcaaattcat
attgttatatcaagagtattgtgtgtatcatggaaagaatcactagaaggaacaatactt
ttaccagaaatggcagcatatgcactcattcacaaattaactgatgtcacagacattatc
aaccaagctattatggaagttttatatatgttttcaagaggagaagatccactaaaagaa
attacctcagaaatgtcatccgatcgggaagacagtccaaacagccaagcaagtcctttg
ttgagtccagtaatgactgtaccatcttatcaattaccaacattaccattacctgctgga
agtaaatcattgcagcctaaaagtcttatttatttattagattcatattcacgagtcgca
atagaggaacgtaatcatcctaagcgatcaagtataccaccactttctgatgtactatct
actctgcgagctcaatgtgttcaatactcgagtcttgttttacaaggtcttataggaatt
tctcaaacttctgtcatgcctgcttatgtcacaccacttcttcatcctatgctctctcag
agtttgcctcgcggttatttgcacgaactcgtagccagaacgcatacgaactccagtatc
ttcagcaaaatttttactcctttgctacaaggcctctatctttctatgcaacaagctagt
ttggttggtaatacacatcgaagacctatagaagcactagaagaactcatagagatccgt
tgtggacctaacggcaatatacgcccaatatgtcgtctaatcactcatcaagcacaattt
ttacctgatgtaatgacgaatgctgcaggaagagaacttacaaggacttcatttcttgga
ccatttctttcaatttctgtgtttgctgaagatcaacctaaggtggctgaaaaattcttt
agtggaaatccatttaccgataaatcaatgaatttgacattacagcaagaattagagagc
acaagaacttctcttcacaaaatgcttcatgcgatacttgcaaatagtaattgccgcgat
gctatgttagcatatttagcagcattactgcatcacaacgaaaagcgtgcccaaatacaa
actgaagagttttcacttgctggagatggatttatgctaaacttactttcagtattacaa
atgctctcagttaaaatcaaattggatacaattgatcctttgtatccgtttcatccttct
agcttcgttgaaataaaaaatgacacaagactgaaacttacttctcaagaagttacagaa
tggctaaaagaattagaaagaacacataagtgggttgaagctaaatttccaacacaatgt
tggtttctcacgttgcactgtcatcatatagcattgttaccagctttacaaaaatatcaa
agaaaattaagagctctgcgtgatttgcagaaaatgctcgatgaactacaagcatctgaa
cctcaatggaaagatgctccatttgcaggacacaataaagaattagtaaagcggtggaaa
caacaactaaaacgtcttggtaaatcaaaatcatgtgcagatgctggtttgattgatcct
gtacttctaaggagatgtttgcatttctacatttctgttgctgaaattttacttagtctt
ttgacacagagcttacctggtagtccacttcctgaacttcctttatcacaagaaattcca
catagatttacagctctaccagagtggtatgtggaggatatcgcagagtttttattattt
actcttcaattctgtccaacagtaatagcaaataatatggataattcattgattacatgg
ttgcttgtggtagtatgtacaccacattgtatacgtaatccatatctgattgcaaaaatt
attgaggttctatttgtaatcaatcctagtgttcaaggtagaacagaaacactccatgat
caagtcatggcacacccaatatccaagacgcttttggcgtcttatcttatgaagttctac
actgatgttgaaacaactggttccagctcagagttctacgataaattctctattcgttat
cacattagtttaattctaaagtcaatgtgggatagtccagtacatcgggcgtctattgta
aatgaaagcaataatggcaatcaatttgttaaattcattaacatgttgatgaatgacaca
acttttctacttgatgaaagtttagaatctttaaaacgtattcatgaagttcaagaactg
atgtctgatctcaatgcatggtctgctctttctgaagaacaacaacaatcacgaagaaga
caattagcagcagacgaacgacaagctagatcttatttaacgttagctaaagaaacagtt
gccatgtttcattatttgactgttgatatcacagaaccatttttgcgtccagaattagtt
ggaagattgtgtgccatgttaaattttaatttacaacaattgtgtggacctaagtgtaaa
aacttaaaagtgagaaaaccacaaaaatatgggtgggaaccacggacgttattaagtcag
ttggttgatatatatttacatcttgactgtgataatttcgcagctgctttagctagcgac
gagcgatcattttgcaaagaactatttactgacgctgcaaatagattacaaaagtctgcg
ataaaaacaaccacagagattgagaggtttatagcgctcgcagaacgagcaacagtgatc
gcaagagataatcgtgcacgtgatgaagattatggtgatgcgccagaagaatttcgagat
cctttaatggatactcttatggaagatcctgttaaacttccatctggtattgttatggac
aaagcagttattataagacatttattgaatagtgcaacagatccttttagtcgtcaacca
cttagtgaggatatgcttacaccaatggttgaattaaaagaaaggatatctatatggaaa
caacagaagaaaaaaccaacaaatatttaa
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