Vespula pensylvanica (western yellowjacket): 122632248
Help
Entry
122632248 CDS
T07720
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122632248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122632248
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122632248
Spliceosome [BR:
vps03041
]
Complex A
U2 snRNP components
U2 related factors
122632248
Complex B
122632248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
122632248
NCBI-ProteinID:
XP_043674781
LinkDB
All DBs
Position
10:1145877..1150987
Genome browser
AA seq
1033 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRERERERDKGRHRERRSRSRDRDRD
RSDRRDRSERERDRDRREKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKEKEKGETEEL
PFDHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKK
WSLEDDSDEETPVVQNSNKEVKEEGALKEEIEETKEETKDEEEEVDPLDAFMAEVQEEVR
KVNKLDSKAPKSTNNGTDPGNRQSVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGE
NLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVETYKEELEGIR
VKGKGCPKPIKSWAHCGITKKELDVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSG
KTLAFLLPMFRHILDQSPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLE
EDQKFYKLLEILGHYQDKGSAIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDST
ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT
FITSEQERYAGDILRAHELAGVPVPEPLRQLWEAYKARQAADGKKVHTGGGFSGKGFKFD
ESEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSATNIAVP
GQPVTSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQ
LAAKLNTKLNYQPREEDLVETDAETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQIS
EYSEAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQAS
GAHTASRGRYKVL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggttcggagcagcgacaaggatagacatcatagaagaaggtctagatcaagatcgaga
tcacgttctgctacaccagaaaagaaacgacgacgttctagaagcagagaaagagaaaga
gaaagagacaagggaaggcatagagaaaggagaagtcgttcacgagatagagacagggat
agaagtgacagaagagaccgttcggagagagaaagggatcgtgacagaagggagaaacgt
ggagacagtaaagaaaagcgtcttacaggctcaaagtcgtcacgctctggtaaagagcga
tccaacagatctcgttcgagggacagaaaggagaaggagaaaggggaaacagaagaatta
ccatttgatcatacaaaattagataaagaagaggaacaaaaacgattggaattagaaatg
caaaagagaagagagaggatagaaagatggcgtgctgaaaggaagaaaaaggagttagag
gcaactaagaaagatggtaagacatctattttggcaaatcttcaattgcctatgaaaaaa
tggtccctcgaggatgacagtgatgaggaaacgcctgtggttcagaatagcaataaggaa
gtcaaagaggaaggtgctttgaaagaagaaatagaagagactaaagaagagaccaaagat
gaagaggaagaagttgatccgcttgatgctttcatggcagaggtccaagaagaagtcaga
aaagtcaataaactcgacagtaaagctccaaagagtactaataatggtacagatcctgga
aatcgacaaagtgttgttattgtcacaggcgtggctaaaaagaaagtacagaaacaaaaa
ggagagttaatcgaacaaaatcaagatggtcttgagtattctagtgaagaggaaggagaa
aatcttcatgagacagcagctggaattgccaataaacaaaaaagagaactagctaaagta
gatcatgcgacaacagaataccaaccatttagaaaatcattttatgtagaagtacctgag
attgctaggatgacatctgaagaagtagaaacttataaggaagagctagaaggtatacgt
gtaaaaggaaagggatgtccaaaaccgattaagtcatgggcacattgtggcataactaaa
aaagaattagatgttctgaaaaaacttggatatgaaaaaccaacccctatccaatgtcaa
gccattccagctataatgtccggacgcgatcttataggaatcgcaaaaactggaagtgga
aaaacactagcatttttattaccaatgtttcgtcacatattagatcaatctccattagct
gacggagatggaccaatcgcattaatcatgacaccaactcgtgaactttgtatgcagatt
ggtcgagattccaaaaaattcacaaagtctttaggtctttcgcacgtatgtgtgtacggt
ggtactggtatatctgaacaaatagcagaattaaaaagaggtgcagaaataatcgtgtgt
acaccaggaagaatgattgacatgttagcggcaaatagtggtagagtgactaatttacgt
agagtgacttacgtagttctcgatgaagctgacagaatgttcgacatgggtttcgaacca
caagtaatgcgtataatggaaaacgttagaccagatagacaaacagttttgttcagtgca
acgtttccaagacaaatggaagcacttgccagaagaatacttactagacctgtcgaagta
caagtcggtggtcgttccgtagtttgcaaagacgttgaacaacatgtggtggtattagag
gaagatcaaaagttttataaacttctcgaaatccttggacattaccaagataaaggctct
gctatcgtatttgtcgataaacaagaaaacgcagatacacttttaaaagatcttatgaaa
gcctcttactcatgcatgtctctacacggaggtattgatcaatgcgacagagattcaact
attttagacttcaaagctggacgaacgaaattgcttgttgcaacgtctgtggccgcgaga
ggattagatgttaaacatcttgtacttgttgttaattatgattgtccaaatcattatgaa
gattatgtacacagatgtggtagaacgggcagagctggaaataaaggatatgcatataca
tttattacatccgaacaagaacgttatgcaggcgatattttacgtgcacatgaattggca
ggtgtacctgttccagaacctctgcgacaattatgggaagcttataaggctcgtcaagca
gcagacggaaagaaagtacatacaggaggtggttttagcggtaaaggtttcaaattcgac
gaatcagaagcggcattggccaacgagaaaaagaaattccaaaaagcagcccttggtctc
caagattccgatgacgaagacattgaaaatgatatcgatcaacaaatcgaaagcatgctt
gctcctaaaagaacggttcgcgagatcgcgagaccatccgctacaaatattgcagttcct
ggtcaaccagtgacaagtgctaccgacaaattagaattggccagaagacttgcatccaaa
atcaatattgctaaaaatttaggtgcagaagcaaaaggagctacgcaacaagcagcagaa
gctatattgaagggtgccggtcctacaaatttgattacggcaaagaccgttgccgaacaa
ctggctgctaaattaaatactaaacttaattatcagccacgcgaagaagatctcgtggaa
accgacgcggaaactggcgaacaaactttccgcaaatacgaagaggaattagaaataaat
gatttccctcagcaagcaagatggcgtgttacgagtaaagaagctttagcacaaatctct
gaatactcggaggcaggtcttacagttagaggaacgtacattgctcctggtaaagcaccg
ccagaaggggaaagaaagttgtatcttgcgattgagtcaaccagtgaattagcagttagc
aaagcaaaggcagaagtctctcgacttataaaagaagaattaatcaagttacaagcatct
ggagctcataccgcttcgcgcggacgatataaagttttgtaa
DBGET
integrated database retrieval system
