Vespula pensylvanica (western yellowjacket): 122632294
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Entry
122632294 CDS
T07720
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122632294
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122632294
Spliceosome [BR:
vps03041
]
Complex C
Other components
Complex C specific factors
122632294
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122632294
NCBI-ProteinID:
XP_043674881
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All DBs
Position
10:complement(7022066..7033068)
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AA seq
684 aa
AA seq
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MNTKPVFSKPGSSTWQEDKPDIDAHSSTQFVYNAHHSLALDMQRKRLPIFRNRDHIIYLL
EKYQTLVLVGETGCGKSTQLPQYLLEAGWCEDGKIIGITEPRRVAATSLASRVADERNCI
LGTEVGYCIRFDDCTNESTKIKYMTEGILLRELMSDPLLTTYAIIVLDEVHERTLMTDII
MGLLKKIIRKRKSLKIVVSSATVDAEQLRDFFNMNTTKDSSKDTAVIMSVEGRLYPVDIF
YVREPVPNYVTSVVDTALKIHEVEEPGDILAFLTGLDEVDQAVSLLSEHAKLIKDGKLKL
QPLAMYGSLPNNEQLKVFWRAAKDTRKVIVATNIAETSITIPNVVYVIDCGFVKMPWFEP
ETQTNSLTIVPVSKASADQRAGRAGRVQSGKTYRLYTEEAYNELPEATPPEMQRSDLAPA
ILQLKALGIDNVLRFNFPSAPPSKNLIAGMELLYALGAIDNDGELTTPLGMTMAEMPLEP
TFGKCLIVSGQMGCSEEIASIIAMLQVQNVFIRPGGGQAIAKARVAHRKFEVEEGDLLTL
LNVYAAYEKNKTPSWCQKNFLNNKALRRASEIRGQICRMLKKLDIPLTSCNGNVEQILKC
ITTGLFPKAAYLHYTGVYKTIRGDKDLYIHSNSCLYTIQQPQWILYCEIVQTNKTYMKDL
TTIQSEWLLELAPHFYEKTSIDPV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaacctgtattttctaaacctggaagttcaacatggcaagaagacaagcca
gatatcgacgcgcattcttcgacacaatttgtatacaatgctcaccattccctcgcattg
gatatgcaacgcaaacgactacctatattcaggaacagagatcacatcatatatctactt
gaaaaatatcaaactctagtcctggttggagaaactggatgtgggaaaagtacgcagtta
ccacagtaccttctcgaggcaggatggtgcgaagatggtaaaataattggaataacagaa
ccaagaagagttgcagctacatcattggcaagtcgagttgctgacgaacgtaactgcata
cttggaaccgaagttggttattgcatacgtttcgatgattgcaccaatgaatctaccaag
atcaaatatatgactgaaggaatattgttacgtgaattaatgagcgatccattgctgaca
acgtatgcaataatcgtattggatgaagtacatgaaagaactttaatgactgacatcatt
atgggtcttttaaaaaaaattattagaaaacgtaaaagtttaaagatcgttgtgtcctcg
gcaacggtcgatgccgaacagctacgcgatttttttaatatgaatacaacaaaggattct
tcaaaggatactgccgtaattatgagcgtcgagggtagattatatccagtagatattttc
tacgtcagagaaccagtaccaaattacgttacgagcgttgtggacacagctttaaagatt
cacgaggtagaagaacctggtgacattttagcatttctcacgggactcgacgaagtagat
caggcagtttctcttctatcagaacatgctaaacttataaaggatggaaaactaaaacta
caaccattggcaatgtatggatctctaccaaacaatgaacaactgaaggtattctggaga
gctgccaaagatacgcgaaaagttatcgtggcgacaaatatcgctgaaacttcaattacc
attccaaacgtcgtttacgtgatcgattgcggctttgtcaagatgccctggtttgaaccg
gaaacgcaaactaatagtcttactatcgtacccgtgtctaaagcttcggctgatcaacgt
gccggtcgtgcgggtcgtgttcaaagtggaaaaacttatagattatatacggaagaagct
tataatgaattaccggaagcaacgccaccagaaatgcaaagatcggatttagcaccagcg
atcttgcaattaaaagcattaggaatcgataatgtacttcggttcaattttccatcggct
ccaccaagtaaaaatcttatagcaggcatggaattactttatgcgttaggtgctatagat
aatgatggggaactgacgacaccattaggcatgacaatggcagaaatgccattagaacct
acctttggaaaatgtcttattgtttccggacaaatgggttgttcggaagaaattgcatcg
ataatagcgatgcttcaagtacaaaatgttttcattcgacctggcggtggtcaagccatt
gcaaaagccagagtggctcatcgtaaattcgaagtagaggaaggcgatctcttgacgtta
ttaaatgtttatgctgcctatgagaaaaataaaacgccaagttggtgtcaaaagaatttt
ttaaacaataaagctttacgaagagcttcggaaattcgaggacaaatttgtcgaatgtta
aagaaattggatattcctttgacatcttgcaatggaaacgtggaacaaatattgaaatgc
ataacaacaggattatttccaaaggctgcgtatttacattatactggtgtatataaaacg
atccgaggggataaggatttatatatccactcaaacagttgtctatatactattcaacag
ccacaatggatactttactgcgaaatagtacaaactaataaaacttatatgaaagattta
actacgatacaatctgaatggttattggaattggccccacatttttacgaaaaaacttca
atcgatcctgtgtaa
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