KEGG   Vespula pensylvanica (western yellowjacket): 122632460
Entry
122632460         CDS       T07720                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
vps  Vespula pensylvanica (western yellowjacket)
Pathway
vps03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vps00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122632460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vps03019]
    122632460
Enzymes [BR:vps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     122632460
Messenger RNA biogenesis [BR:vps03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     122632460
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 AAA_16 AAA_22 MMR_HSR1 CTV_P13 nSTAND3 ATPase
Other DBs
NCBI-GeneID: 122632460
NCBI-ProteinID: XP_043675183
LinkDB
Position
10:complement(7717426..7719262)
AA seq 422 aa
MSDEKSTTQEFKLDPDCELRFEVESKNEKVTLELKNGLGEVFGTELVKGKKYEFSAGAKV
AVFTWQGCTVELIGKTDVSYVAKETPMGLYLNCHAAMERMREAAEKGDRRGPITMVVGPC
DVGKSTLCRLLLNYAVRMGRRPIFVDLDVGQGDIAIPGTVGALLVERPSNVIEDFSQQAP
LVFHFGHKTPSANVALYNLLVTRLAEVCSDRLQANKKARVSGIVINTCGWVKGDGYKLLT
HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQAQRTEARDQGVRA
YFYGSRTPLYPHSFEVKWNEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPNLLH
HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVDRQTFTVLSPQPRPLPNTVLLLSDIQFMD
SH
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtccgacgaaaaatctacaactcaagaatttaaattggatcccgattgcgaactacgt
tttgaagtagaaagtaaaaatgagaaagttacgttagagttaaaaaacggattaggtgaa
gtatttggcacagaattagtgaaaggtaaaaaatatgaatttagtgctggagcaaaagtt
gctgtctttacatggcaaggatgtaccgttgaactaattggaaaaacggacgttagttac
gtagccaaagaaacaccaatgggtttatacctaaactgtcatgcagctatggaaagaatg
cgagaggcagcagaaaaaggagatagaagaggtcctataactatggttgtaggaccttgc
gatgtaggaaaatcaactctttgtagacttttattaaattatgcagttagaatgggaaga
agaccaatctttgttgacttggatgttggacaaggcgatatagctatacctggtacagtg
ggtgctttattggtagagagaccatccaatgtaatagaagattttagtcaacaagcaccg
ctcgtttttcattttggacataaaaccccatccgctaatgttgctctatataatcttctt
gtaacccgtttggcagaagtttgttctgaccgacttcaggcaaataaaaaagcaagagtt
tcaggaattgtaataaatacttgtggttgggtaaaaggagatggatataaattactgaca
catgctgctcaagcattcgaagttgatgctattttagtattagatcaagaaagactttac
aatgaactcgttagggatatgccggattttgtaaaagtggtctttctacctaaaagtggt
ggtgtggttgaaagaagtcaagctcaaagaactgaagctagggatcaaggagtccgtgca
tatttttatggatcaagaacgcctttgtatcctcatagctttgaagtaaaatggaatgaa
gcaagattatataaaataggagcacctgttttacctgcatcttgtatgccattaggaatg
aaagctgaagataatttaacaaaactagtagctgtcacgccaggtcctaacttgttacat
catctattgtctgtatcttttgcagattctcctgaagatgatgttgtacaaactaatgtt
gctggattcgtttgtgtcaccaatgttgatgtagacagacaaacgtttactgtacttagt
cctcaaccaaggccactaccaaatactgttctgttactttcagatatacaatttatggat
agccattga

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