Vespula pensylvanica (western yellowjacket): 122633086
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Entry
122633086 CDS
T07720
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03030
DNA replication
vps03410
Base excision repair
vps03420
Nucleotide excision repair
vps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122633086
03410 Base excision repair
122633086
03420 Nucleotide excision repair
122633086
03430 Mismatch repair
122633086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vps03032
]
122633086
03036 Chromosome and associated proteins [BR:
vps03036
]
122633086
03400 DNA repair and recombination proteins [BR:
vps03400
]
122633086
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122633086
DNA Replication Termination Factors
ELG1-RFC complex
122633086
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122633086
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122633086
Check point factors
HRAD17(Rad24)-RFC complex
122633086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_14
AAA_16
Rad17
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
RuvB_N
nSTAND3
AAA_19
AAA_18
AAA_assoc_2
DEAD
DNAX_ATPase_lid
AAA_23
RNA_helicase
cpSF2-GREB1
AAA_28
ABC_tran
MeaB
NTPase_1
AAA_5
ATPase_2
AAA_3
IstB_IS21
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
122633086
NCBI-ProteinID:
XP_043676555
LinkDB
All DBs
Position
11:263747..266838
Genome browser
AA seq
351 aa
AA seq
DB search
MTRDHDTNEIMEVEILPSTSGYNSKNKERSNKSYDLPWIEKYRPQVFSDIVGNEDTIARL
SVFAQHGNTPNIIISGPPGVGKTTTILCLARILLGPIFKDAVLELNASNERGIDVVRNKI
KMFAQKKVNLTKGKHKIIILDEADSMTDGAQQALRRTMEIYSSTTRFALACNNSEKIIEP
IQSRCAMLRYGKLSDAQILAKVIEVCQKENVSYTDDGLESIVFTAQGDMRQALNNLQSTY
NGFGHVNGTNVFKVCDEPHPLLVKEMLELCTQGNICKAFTIMQHLWRLGYSAEDIIGNIF
RVCKNLPIDEKLKLDMIKEIGITHLGIVNGMNSLLQMNSLLARLCQKAVSK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagatcacgataccaatgaaataatggaagtagaaattttgccatctacgagt
ggatataattcaaaaaataaagaacgatccaacaaatcctatgatttaccttggattgag
aagtatcgaccacaagtattttcagatattgttggcaatgaagatactattgctcgttta
tctgtttttgcacaacatggaaatacaccaaatattattattagtggaccacctggtgta
ggaaaaactacaactattttatgtttggcacgtatacttttaggtccaatttttaaagat
gcagtattagaattaaatgcatctaatgaaagagggattgacgttgttagaaataagatc
aaaatgtttgcacagaagaaagtaaatttaactaaaggaaaacataagataattattttg
gatgaagctgatagtatgactgatggagcgcaacaagctcttcgtcgtacaatggaaata
tatagtagtacaactagatttgcattggcatgtaataacagtgagaagattattgaaccg
atacaatcacgttgtgccatgttaagatatgggaaattaagtgatgcacaaatcttggca
aaagttatagaagtttgtcagaaagagaatgtttcatatacagatgatggtttagaatct
atagtatttactgctcaaggtgatatgagacaagcattaaataacctacaatctacttac
aatggatttggtcatgtaaacggtacaaatgtttttaaagtatgcgacgaaccacatccg
cttctggtaaaggaaatgcttgaattatgtacacaaggaaatatttgtaaagcttttacg
ataatgcaacacttgtggagattaggttattctgcagaagatataattggaaatatattt
cgagtttgtaaaaatcttcctatagatgaaaaattaaaattggatatgataaaggagata
ggaataacacacttaggaattgtgaatggtatgaatagtttattacaaatgaatagtctg
ttggcccgattatgtcaaaaagctgtttcgaaataa
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