Vespula pensylvanica (western yellowjacket): 122633381
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Entry
122633381 CDS
T07720
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03008
Ribosome biogenesis in eukaryotes
vps03013
Nucleocytoplasmic transport
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122633381
03015 mRNA surveillance pathway
122633381
03008 Ribosome biogenesis in eukaryotes
122633381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122633381
03009 Ribosome biogenesis [BR:
vps03009
]
122633381
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122633381
mRNA cycle factors
Stress granule specific factors
122633381
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122633381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
122633381
NCBI-ProteinID:
XP_043677128
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All DBs
Position
12:2883545..2887115
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AA seq
627 aa
AA seq
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MSKKPNKSAWGRRGRRTSNPEDKHYFGHDDRVGRTSSGTCGNRRRVSFKPQGRLGRDISR
SLTLALDDDIPMAGTSNNNNRQVIVRGRNRGLSRGRNSPLPHRAIRTGILSTPQSLPAGE
TNWYKITIPYGAKYTKDYILSSLNSIASEAFVPIMYKTSGNEASFYVDSQKAASILLHCD
RKITTTNGFKLRIKIKLGLPQCEISDALKERLKQAMVKRYVQETNALDLSKFHHDPDLIA
DYFCALSRPIMLMAVLDIVSEYVPTLEALNLDGNKLYMIEKLDVLYKKFPRLKILYIGDN
KIKEISQLDAIKELQLEELRLTGNPVSNRYISRQNDYISGVRKIFPKLLRLDGIELPRPI
LFDVANDTTKVPHTQRLFVTDVKAQDIASQFLQQYFIIFDSENRHPLLDAYDEHARFSLT
VINNQTTERLSAYLSENRNLFRVNNNNKRQKLLKQGRLPVLSFIIELPRTKHHLNTFTMD
ISVITQGMMLITVTGLFDELNNKGDQLRYFNRTFIIVPRGNGYCICNEQLHISLPTEEQC
KKFITDNFSAQMSDVPSGSKSSSEIRSPQLTEDVKRKMALTLSQETNMNSEWSLKCLEEV
HWNYENAILAFQELFKHGQIPSEAFTK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaacctaacaaatctgcatggggaagacgaggcagaaggacgagtaatcca
gaagataaacattactttggacatgatgatcgtgttggaagaacaagcagtggaacgtgt
ggaaatagacgtcgtgtatcttttaaacctcaaggaagattaggcagagatatatcaaga
agcttaactttggcattagatgatgatataccaatggcaggaacttccaataataacaac
agacaagtcattgttcgaggaaggaatagaggtttatctagaggaagaaatagtccttta
ccacatagagcaattcgtactggtatcttatctacacctcaatcactacctgctggagaa
actaactggtataaaattacgataccatatggtgcaaaatatacaaaagattatattttg
agcagtcttaacagcattgcttcagaagcttttgtacctataatgtataagacttcagga
aacgaagcgtccttttatgttgatagtcaaaaagcagcaagtattcttcttcattgtgat
cgtaaaattacaacaacaaatggatttaaacttcgaataaaaattaaattaggacttcca
cagtgtgaaatcagtgatgctttaaaagaaagattaaaacaagctatggttaaacgatat
gttcaagagacaaatgctttagatttatcaaaatttcatcatgatcctgatcttattgca
gattacttttgtgcattatctcgaccgattatgttaatggcagtattagatattgtgtca
gagtatgtacccacgttagaagcattgaatctggatggtaacaagttatatatgattgaa
aaacttgatgtcctatataaaaaatttccaagattgaaaatactttatataggagataat
aagataaaagaaattagtcaattagatgctataaaagaattacaattagaagaattaaga
ttgacaggaaatcctgtctccaataggtatatatctcgtcaaaatgactatattagcggt
gtacggaaaatatttcctaagcttttaagactggatggtatagagttaccacgtccaata
ttatttgatgttgcaaatgatacaacaaaagtgcctcatactcaacgattatttgtcaca
gatgttaaagcacaagacatagcaagtcagttcttgcaacaatattttattatttttgac
agtgaaaataggcatccattgttagatgcatacgatgagcatgcacgtttcagtttgaca
gtgataaataatcaaactactgaaagattaagtgcatatctttcagagaatagaaattta
tttagagtaaataataataataagaggcagaaattattaaagcaaggtagattaccagtt
ctatcttttataatagaactaccacgaacaaaacaccatttaaatacctttacaatggat
atcagtgttataactcaaggaatgatgttgatcacagtaacaggattatttgacgaattg
aataataaaggtgatcaactacgttatttcaataggacatttatcatagtaccaagagga
aatggctattgtatctgtaatgagcaattgcatattagtcttcctactgaagaacaatgt
aaaaaattcatcactgataatttctcagcccaaatgtctgatgtaccaagtggatctaaa
tcttcatcagaaatacgatcaccgcaattaacggaagacgtaaaacgaaaaatggcatta
acattaagtcaagaaacgaacatgaattcagaatggagtttgaaatgtttagaggaagtt
cactggaattatgaaaatgcaatattagcttttcaggaacttttcaaacatggacaaata
ccgtcggaagcatttacaaaataa
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