Vespula pensylvanica (western yellowjacket): 122633537
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Entry
122633537 CDS
T07720
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122633537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122633537
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122633537
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122633537
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
122633537
NCBI-ProteinID:
XP_043677440
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All DBs
Position
12:5035689..5040142
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AA seq
683 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVDTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSAATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDIDKKTKPVKPTA
VRPLINSQASIPTTGSTATIKSNLLSSSTPSKTIPMTSSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSSKTSSHSSENGLLSSSSTSSVTSNVQQSISQQHNNPAPVQTTHIL
HSQQSQNHNSEAEMTTPIPPSSSPQSSVSTRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLEIPPSEPNRNIFDSAKANNSNNATSEAHIPPLLGVAPLGPVPLQKE
HQLQFQMMEAAYYHMPHPSDSERLRSYLPRNLCPTPPYYQQVQLPHSDTVEFFQRLSTET
LFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYE
KWGQRKKEGFTFEYKYLEDRDLN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtgacagag
ggtgtagaaacctttgaagatatttggcaaaaagttcataatgccactaatagtaatcag
aaggagaaatatgaggcggatcttaaaaaggaaatcaaaaaacttcagaggttacgcgat
caaattaaaagttggatcgcatctggtgaaattaaggataaaagcacacttctcgattac
aggaagttaattgagactcaaatggaaaggtttaaggttgttgaaagagaaacaaaaacc
aaggcctattccaaggaagggttaggtgcagcacaaaaacttgatccagcccagaaagaa
agggaagaagttagcaattggcttgcaaattcgatagatgctttaaaccttcagctggat
acatttgaatcagagatagaatcattactagcaggaaagaaaaaaaggttagataaagat
aaacaggatagaatggatgaactaaaagcaaaacttgataagcatcgttaccatatccgt
aaattggagacattattgcgcatgttggataatatgtctgttgaagttgatacaatcaag
aggataaaagacgacgttgaatattatatcgaatcatctcaagagcctgactttgaggaa
aatgaatacatttatgatgatattattggtcttgatgaagtagagttgtctggggttggt
attccctccgcggcaacaacagatagcaacaatagcaatgagactggaggtacaccaacc
tcgactaactccggtacttcaccaataccttcaccgccattgagttccaccatgcacaac
cattcaagtgatagttccacggatatagataaaaaaacaaagcctgtaaaaccaacagca
gtcaggccgttaataaactctcaagcgagcattccaaccacgggaagcactgccactata
aagtcgaatttgttatcaagcagcactccaagcaagaccattcccatgacatctagccat
agctcgcctagttccactagtaatcatattgcaacaactaatgctggaaattttgccaca
gtagctgcttcacatagtaattcacaagccatccattctacctctagtaaaacatcatct
catagcagtgaaaacggattattgtcgtcatcgtctacatccagtgttacttcgaacgtg
caacaatcgatctcgcagcaacataacaatccagcacctgttcagacaactcatatacta
catagtcagcaaagtcaaaatcacaatagtgaagcagaaatgacaacacccatcccaccg
tcttcttcgccacaatcttcggttagcactaggtcttcgcctctgcctgcgaattcatgc
tcgccagcgccatcgactgccaatggtctcatccctaaacttcctgatggcatgtcctct
ctaaaatctattgcccaacaagtcattgtccgagcaggtctggaaataccaccgtctgag
ccgaatagaaacatctttgacagtgcgaaggcaaacaatagtaacaacgccacttcggaa
gcacacattccacctttacttggcgtagcaccactggggccggtacctttgcaaaaggaa
caccagttacagtttcaaatgatggaagctgcttattatcatatgcctcatccttcagat
tccgaacgtttacggtcgtatttgccaagaaatttgtgtcctacgccaccttactatcaa
caggtacagcttcctcattcggatactgtagaattcttccaacgtctttctacggaaaca
ttgttttttatattttattacatggaaggttccaagggtcaatatttggcggcgaaagct
ctgaaaaaacaaagttggaggtttcatacaaaatacatgatgtggtttcaaagacacgaa
gagcctaaggttattaatgaagaatatgaacagggaacctacatctattttgattatgaa
aagtggggacaaagaaagaaagaaggctttacttttgagtacaagtacttagaggacaga
gacctgaattaa
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