Vespula pensylvanica (western yellowjacket): 122633541
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Entry
122633541 CDS
T07720
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122633541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vps03032
]
122633541
03400 DNA repair and recombination proteins [BR:
vps03400
]
122633541
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122633541
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122633541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
ECT2_BRCT0
BRCT_TopB1_SLF1
BRCT_3
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
122633541
NCBI-ProteinID:
XP_043677454
LinkDB
All DBs
Position
12:5123302..5129783
Genome browser
AA seq
1312 aa
AA seq
DB search
MVSQESQIDCNINIYFVIPNKYKSETECSINMWNAFDQCCDFDIKPVWITEEDCNKLKPE
KTDIFVLEEFKGSFFEWLQNFKCSRIVGPRCLLTCFLNGEPIPEGTSPIYTTAMRGLCIS
VSGLTPEMKNHVQQLVEYMGGFFTKQLRNCVTHLVTNSVMSAKYERAVELKIPVVTKDWI
AAIWEENLNNFIKANDPIFDKYKCPVFMNLIVTSTNLSKRQKEEIKNLINNNGGTFMGPL
DGLKVKIVVAPENSSLTDKLKFAMQNNIACLKPEWVYESLKLGYALPFNNYLIKSTKACS
TPEKLKAHEMESLNFSAISTINSELPQNNYVDESVASTTTNVSCMDVAPTKTGAQLTVLD
RLTLNEAKMAGPFLDGCNIYLAGFTTSQRDKLNRILNVGSATRLNDISDALTHVIIGDEN
KASNELKLMKSAGLCPYMLNINWIEESMKLKRPAPEEKFVYESKGNTTKTSNEPPPSPLS
KKNLQMLQPPRRPSIPRFDIDKASKERNDEDILNQYLQNIVVEDKSVKEFLKPYTPDINE
KERETSKENAPKLSIKNNQRASTLETIENRESGNNSSVPFSQEDPESTMKIFTGFTFVIT
GFSDDEVQDSISALGGEVVSNIYSGIPDFAVVPTCGASLRHAVNEIVTDLFVEDCRNQEQ
IVDVEYYHKPFSISKDINPLTGCIVTLSMYTGVERMYLSRLAEELGAICQDILARKTNEE
KNTYASTHLVCPTPEGHKYKAAVKWKLPAVTAEWLKDCGTRVKRLDETPYLVGETKAPER
PAEAANVSSTRENSFAKKESREKPVVPIPRQIITPKRQLAQIKNQETNYDGTPLINKRLN
LVMNSTPPSPFHVSTPETPYGQVIKPNPSPDTRKAWIKWVNDFPDLRVEEPPLKRRAPST
PLSDLKKQLWEQLKVQGQRTEEDANTSMISTCNNVDNDLPEEDKSVERNEDTSPKNTSIN
RKLNFSQQSNSPIQNVQINLQIAQMEQALKRTSGTEVRPLPDENGKPYENTESMDNIHKY
IAKDSQPDTVGWEDPDHRTVIRPSTIYEQTNEDEETCRDETDRSNHYSNKDITLEDGDDR
SQPLVKRKFMLSGIRDRTTYEQVIRNLGGDVVNDASFDPSATHLMCLRPSRNEKMLGSIA
TGKWVLHCMYLRDSEANGNFLDEEKYEWGNPKSKGIIPDTTGEVENAIAAAAHRWRIKLL
KEPYGPFHDMVALLLASEEKYDQFKRLIEAGGGTVVQARPPYDVNSSGKKITHCFVNIKQ
VQQPIDWARLASKGILCFLPQYLSDLLTAEPPFNPRDRVIPEFKKYLSLLPK
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccaagagagtcaaattgattgcaacataaatatatattttgttataccgaac
aaatataagtctgaaaccgaatgttctataaatatgtggaatgcttttgaccaatgctgc
gatttcgatattaagccggtatggatcaccgaagaggattgtaacaaattgaagccggag
aagaccgatatattcgtattggaagagttcaaaggcagtttcttcgaatggttacaaaat
ttcaagtgttccaggatagtaggaccaagatgtttattaacttgttttttaaacggagaa
cctattccagaaggcacgagcccaatttatacgacagctatgagaggactttgtatatcg
gtgtccggtttgacgccagaaatgaaaaatcacgtgcaacaactggtagaatacatggga
ggtttttttacgaaacaattacgtaattgtgtaacgcacttagtaaccaactctgtcatg
tctgcaaaatatgaaagagctgtagaattgaagataccggttgttacaaaagattggatc
gcagccatatgggaagaaaatttaaataattttattaaagcgaatgatccaatattcgat
aaatataagtgtcctgtttttatgaatttaattgttacgtcgacaaatttatccaaacgt
caaaaggaagaaatcaagaatttgataaataataatggagggacgttcatgggtccttta
gatggtttaaaagttaaaattgttgtcgcaccagaaaatagttcactaaccgacaagtta
aaatttgcaatgcagaataacatagcatgtttaaagccagaatgggtatatgaaagcttg
aaactcggatatgcattgccgttcaataattatcttataaaatctacgaaagcatgttca
acgccagaaaagttgaaagcgcacgagatggaaagtttgaacttttcggcgataagtacc
attaatagtgaattaccacaaaataattatgtagacgaaagtgtagcatcgacaactacc
aatgtttcttgcatggacgttgcaccgactaaaacaggcgcgcagcttacggttttagat
cgattgacccttaacgaagcaaagatggctggaccatttttagatggttgcaatatttat
cttgctggctttacaacgagtcaaagggataaactcaacagaattttaaacgtaggtagt
gcaacgcgtttgaacgatatatcggacgctctgacgcatgttatcatcggagatgaaaat
aaagcatctaacgaactgaaattaatgaagtcggcaggattgtgcccgtatatgttaaac
attaattggatagaggaaagtatgaaattgaagaggcctgcaccggaggaaaaatttgtg
tacgagtcgaaaggtaatacaacgaaaacgagtaacgagcctcctccttctcctctaagt
aaaaagaatttacaaatgctgcaaccaccgagacgaccatcgattccacgtttcgatatc
gataaagcatcgaaggaaagaaatgacgaggacattttaaatcagtatctgcaaaatatc
gttgtcgaggataaatcggttaaagaattcctaaagccttatactcctgacatcaatgag
aaggaacgagaaacatccaaggagaatgctcctaaattaagtatcaaaaataatcaacga
gcatcaacgttagaaacgattgaaaatagagagtcgggaaacaatagctcggtaccattc
agtcaagaagatccagaatctaccatgaagatatttaccggtttcacatttgttataacc
ggcttcagtgacgacgaggtacaggatagtattagtgctttaggcggtgaagtcgtttca
aatatttattcagggatcccggattttgccgttgtgcctacgtgtggagcatcattgaga
cacgcggttaatgaaattgttaccgatttatttgttgaagattgtaggaatcaggaacaa
atagtcgacgtggaatactatcataaaccattttctataagtaaagatataaatcctcta
acgggttgtatcgttactttaagcatgtatacaggagtagaaagaatgtatctttctaga
ctggcagaagaacttggagctatatgccaagacatacttgcacgtaaaacaaacgaggaa
aaaaatacttacgctagtactcacttagtctgtcctacgccggagggacataaatacaaa
gcagcagttaagtggaaattgccagctgttaccgctgaatggttgaaggattgcggaaca
agagtaaaacgcttagacgaaacgccttatctcgtcggcgaaacaaaagccccagagaga
cctgcggaagcagcgaatgtgagtagtacgagagaaaattcatttgcgaaaaaagaaagt
cgagaaaaacctgtcgtgcccattcccagacagataattactcccaaacgacaattagcc
caaatcaagaatcaagaaacgaattacgatggaacaccgttgataaataaacgacttaat
ttagttatgaacagtacaccgccttccccctttcacgtatccacgccagaaacaccgtac
ggtcaagttattaagccaaatccttctccagacacgagaaaggcatggatcaaatgggtg
aacgattttccagatttgcgcgtagaagaaccccctctaaaaagaagagcccctagcacg
ccattgtccgacttgaaaaaacaattatgggaacaattaaaagtgcaaggacaaagaact
gaggaggatgcgaatacgtcgatgatatcaacgtgtaacaatgtcgataacgatttaccg
gaagaagataaatccgtagaacggaacgaagatacgtctcccaaaaacacctccatcaat
agaaaattaaatttctctcaacagagtaatagtccgattcaaaatgtacaaataaatctg
caaatagctcagatggaacaagcacttaaacgaacgtcaggtaccgaggtcaggccacta
ccggacgaaaatggaaaaccgtatgaaaatacagaatctatggataatatacacaaatat
attgctaaagattcacagccggacactgtgggatgggaagatcctgatcatcgtacggtg
attagaccctccacgatatatgagcaaacaaacgaggatgaagaaacttgtcgagatgaa
accgatcgaagtaatcattactcgaacaaggatattacattggaagacggagacgatcgg
agccaacctttggtcaaacggaaattcatgctctctggaatacgggacagaacgacgtac
gagcaagtaatacgaaatcttggtggggatgtggtcaacgatgccagttttgatccaagc
gcaacgcacttgatgtgcttaagaccatcgagaaatgaaaaaatgctcggcagtatcgcc
accggaaaatgggtcttgcattgcatgtatttacgagattccgaagctaatgggaatttt
cttgacgaagagaaatatgaatggggcaatccaaaaagtaaaggaattataccggatact
acaggagaggtcgagaatgcgatagcagcagcagctcacagatggaggataaaattattg
aaggaaccgtatggtcctttccatgacatggtagccttgttattagcttcggaagaaaag
tacgatcaatttaaaaggctcatcgaggcgggaggtggtacggtggtacaagcacgacct
ccttacgacgtaaactcgtcggggaaaaaaataacgcactgcttcgtgaatataaagcag
gtccaacaacctatcgattgggctagattagcgagtaaaggcattctgtgctttttgcca
caatacttgagcgatcttcttacggcggaaccacctttcaatcctagagatcgcgtgata
cccgaattcaagaaatatctttctcttttgccgaaataa
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