Vespula pensylvanica (western yellowjacket): 122633728
Help
Entry
122633728 CDS
T07720
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03030
DNA replication
vps03420
Nucleotide excision repair
vps03430
Mismatch repair
vps03440
Homologous recombination
vps03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122633728
03420 Nucleotide excision repair
122633728
03430 Mismatch repair
122633728
03440 Homologous recombination
122633728
03460 Fanconi anemia pathway
122633728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vps03000
]
122633728
03032 DNA replication proteins [BR:
vps03032
]
122633728
03400 DNA repair and recombination proteins [BR:
vps03400
]
122633728
Transcription factors [BR:
vps03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122633728
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122633728
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122633728
MMR (mismatch excision repair)
122633728
DSBR (double strand breaks repair)
HR (homologous recombination)
122633728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
UPF0167
IBR
DUF5114
Motif
Other DBs
NCBI-GeneID:
122633728
NCBI-ProteinID:
XP_043677961
LinkDB
All DBs
Position
13:3303430..3307033
Genome browser
AA seq
593 aa
AA seq
DB search
MIPLTEGSLDKIMAGIDVEKPILQILGHKKLASSSSGDRYRLLVSDGKRVNSFTMLATQL
NSMITDNILTEFSICQVNRYAVSTVNNGGKQKRVMVILSLDLKVSGEEVGSKIGNPTNID
SNANTEVEPKKPQPIQTHSAVTIQKNTTNHSSSDICTTPIVGLSPYQNKWVIKARITNKS
NIITWSNSRGEGKLFSMDLVDESGEIRCTAFKDQCDKFYDMVEVGKIYYISRCSLKPANK
NYNTLKNDYEMSLTQDTEIIPCHDDIDAIPMIQFNFVPINAIENKEKNDIIDVLGIAKSC
EEIQILRARTTGRELKKREVTLIDESNTMISLSLWGADAEKFDGSNNPIVAIRNARIGEF
NGGKNLSCIMSSVFQVDPDIPEAHKLRGWYNTIGMSDQAKSLSTSNARGGGMNGTWLTIK
EAQNITNSSDSGFNIFISKLTVNLVRAENVVYKSCPTDGCNKKMIDQANGMYRCEKCNKE
YPSFKYRLLANVNFGDWQNNQWVTAFNDEAEKLLNITAQELGELQENNKDAYMDKFSEVA
FQSFIVKLRMKIETFNDETRLKASCLSISPVDYKVYNDILLTKIKDIVGIEKL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttaacagaaggatcattagataaaattatggcaggcattgatgtcgaaaaa
ccaattttacaaatattgggccataaaaagttagcaagttccagtagtggagatcgttat
agattattagtttctgatggcaagagagtaaattcatttacaatgttagctacacaatta
aattcaatgattacagataatattttgactgaattttcaatatgccaagttaatagatat
gctgtaagtactgtcaataatggtggaaaacaaaaacgtgtgatggtgatattgagtctt
gatttaaaagtatctggtgaagaagtaggttccaaaataggaaatcctacaaatatcgat
agcaatgcaaatacagaagttgaaccaaaaaaaccacaacctatacaaacccacagtgct
gttactattcaaaaaaatactacaaatcattcatcttctgatatatgtacaactcctatt
gttggattaagtccatatcaaaataaatgggttatcaaagcaagaattacaaataagtct
aatattattacatggtctaattctcggggtgaagggaagttattttctatggatttagtt
gatgaaagtggtgagataagatgtacagcatttaaagatcagtgtgataaattttatgat
atggtagaggttgggaaaatttattacatttcacgatgtagtttaaaaccagcaaataaa
aattacaatactttgaagaatgattatgaaatgagtttgactcaagatacagaaattatt
ccatgtcacgatgatatagatgctattccaatgattcaattcaattttgtaccaataaat
gctatagaaaataaagaaaagaatgatattatagatgttttgggaatcgcaaaatcttgt
gaagaaatacagatactgagagcacgaaccacaggcagggaacttaaaaagagagaagtt
acgttgatagatgaaagtaataccatgatatctttgagtttatggggtgcagatgcagaa
aagtttgatggaagtaataatcctatcgtggctattagaaacgcacgtattggtgaattt
aacggtggaaaaaatctttcctgtataatgtcttctgtttttcaagtagatcctgatata
ccagaagcacacaaattacgtgggtggtataatactataggaatgtctgatcaggctaaa
agtttatctacgagtaatgcacgtggaggtggaatgaatggaacatggttaactataaaa
gaagcgcaaaatataacaaactccagtgatagtggcttcaatatcttcatttcaaaactt
actgttaatttggttagagctgaaaatgttgtttataaatcatgtccaactgatggctgt
aacaagaaaatgatagatcaagctaatggaatgtacagatgtgaaaaatgtaacaaagaa
tatccgagttttaagtaccgtcttcttgcgaatgtcaattttggagattggcaaaataat
caatgggtaacagccttcaatgacgaagctgaaaaattattaaatataacagcacaagaa
ttgggagaattacaagaaaataataaagatgcatacatggacaaattttctgaagttgca
tttcaaagtttcattgtgaaactacgtatgaaaatagaaacattcaatgacgaaacaaga
ttaaaggcaagctgtttatcgatatcaccggttgattacaaagtatacaatgatatcttg
ttaacaaaaattaaagatatcgttggaattgaaaagctttaa
DBGET
integrated database retrieval system
