Vespula pensylvanica (western yellowjacket): 122633957
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Entry
122633957 CDS
T07720
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vps04131
]
122633957
Membrane trafficking [BR:
vps04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122633957
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122633957
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
122633957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
122633957
NCBI-ProteinID:
XP_043678388
LinkDB
All DBs
Position
13:816496..828585
Genome browser
AA seq
1276 aa
AA seq
DB search
MASRSDACAIGYKRPSAQPFLGEMKEHSASSKVERDKDPPQRSYSSAASLMSIGADISPS
SSHFFEVLYVGKIRVSHPKVSESFIDDALLRFRSHGLEKSKSSAGALLSEYQQIQRQALL
SANRRNSTESSASETGSVENVSRHGSVATLAIAAMAASSSSRSEDNSNGSQGGTSSTSID
NNSGANIQVPVVMRNRAGSMSNVLTGRRDSSPKTGDEHNRTMLFQVGRADLRLISPDRKQ
VLLHKQIKDVASCVQGAKNSEHFGFICREATIESFVGYIFKCQSESVADDLVAAITQAFV
ATCDGTRKERYPVFSCEHCPMFWYNKLCQEIEGQNDRRTQNIIFSRMEQLPEDEQEIVVN
KYKGAEAIGGGSGAGSSLREQNQFLIRLLRAHCEAKQARHVHDTAENRSEFLNQYLSVGV
GSTIFMKAKRSLTNSFDNLMKRKGSREDFGLVSHAKDSNHLNTALQKSGSQSPDNSRQSS
IGESSTETSGRPRSLRVSPEQQLSVNTGPRSSMMDIFLKVGNSPKMSPTECDGNTEMHSN
GSWRQAILHRVVTPNKEHDKKNGKSENSDANETPRAVATHRTREELRDLWKKAINQQVIL
IRMEKENARLKERQEEATVKRIKLEYDEISSCARELIEVWDLLVSKESRVSTKCDNQMLL
HAIKQGVPKGKRGEVWQFLAEQFCLKQPPIDTHDFPNYNTSYDLLLKQLTSQQHAILIDL
GRTFPNHQYFSSPLGPGQLALFNLLKAYSLLDHEVGYCQGLSFVAGVLLLHMVEDQAFFL
LRHLMFRRGLRKLYLPDMAALQLHLYQLSRLLHDRLPALYDHFDKHEVSPTLYAAPWLLT
LFASQFPLGFVTRVFDLLFLESSEIIFRVAVALLEEHQDQLLCCDSFEEIMEYLKTRVPA
VDKATLDRVMKRVFYPDMEVSKQLNEYRVEYQVLQEEMLSVKPQIESLEKFKSVNKQLMK
QVSQLNEQLEITMNNLQRLEMARSMQQTVVNKLESQNRSLEVTVATLGTFIQHLTETRDD
LDLPGEIRRIVSQINIVEKRRNMSKIYPLKILEDNSKQGLIKSNSGGRDSQNFLRNSNVI
DPPYPLKSTLSQPNLATKLERVSSFFSNSHNHIQKQRAQLAALRNEYTDQNIRSNNDEND
PKTVNIDIQITDAMTSQDDNVEQSDNHLKIQSINLEKSISLPLSNAKLKLKPSKSAYELG
SVKIVPTSKIEVTNEDSLTNLTGTVHPLDTCSDVNFRYGGTTKLKSIKPVRLSSPSGQGD
NVNKNTQNQNTEALNR
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcgaagtgacgcctgcgctatcggctataaaagaccttcggcccaaccattt
ttaggagaaatgaaggaacactcggcttcttcgaaagtcgaaagagacaaggatccgcct
caaagatcgtacagcagcgctgccagtttgatgtcgatcggcgcggatatatctcctagt
tcttcccattttttcgaggtactctacgtcggtaagatcagagtctcccatccaaaggta
tccgaatccttcatcgacgatgccctcctcagatttcgctctcatggtctcgaaaaatca
aagtcctctgcgggtgctttactctccgagtatcaacaaatccaacggcaagctctcctt
tctgccaataggaggaacagtacggaatcgagtgccagcgaaacgggcagcgtagaaaat
gtatctagacatggttcggtggcaacgttagcgatcgcggcgatggctgcttcttcttcc
tcgagatcagaagacaatagtaacggtagtcagggcggaacatcttcaacgagtattgac
aataatagcggagctaatatacaggtgcccgtagttatgagaaatcgtgctggttcgatg
agcaacgtcttaacaggcagaagagattccagtccaaagaccggcgacgagcataatcga
actatgctatttcaggtgggtagagccgatttgagattgatcagtcccgacaggaagcag
gttttgcttcacaaacaaatcaaagacgtggcgagttgcgtgcagggtgcaaagaattcc
gaacactttggttttatctgtagggaagcaacgatagaaagtttcgttggttatatattc
aaatgtcaatccgaatccgttgccgacgatctggttgcagccatcacccaagcattcgtt
gcaacctgcgatggtacgagaaaggagagataccctgtattctcttgcgaacactgtccc
atgttttggtataataaactgtgtcaagagatagaaggtcaaaacgatcgacgaactcaa
aacataatattctctcgaatggagcaattgccggaagacgagcaggagatcgttgtgaac
aaatacaaaggtgcagaggcaatcggaggaggatccggtgcgggttcgagtttgcgcgaa
caaaaccaatttctcattagattattacgtgctcattgcgaggccaaacaagccaggcac
gttcacgatacagctgaaaatagaagcgaatttttgaatcagtatctcagtgtaggcgtt
ggcagtacgatattcatgaaagcaaaacgctctctgactaatagtttcgataatcttatg
aaacggaagggttcgcgagaagactttggactcgtttcgcacgcgaaggactctaatcat
ctcaataccgcgttacaaaagagtggcagccagagtcccgataattcgcgtcaatcgtcg
ataggcgagtcatcgactgaaacgtctggcagaccgagatcgttgcgagtatctccggaa
caacagttatcggtgaacacgggaccgcgaagttccatgatggatatcttcttaaaagtg
ggaaattcgccgaaaatgtcgcccacggaatgcgatggaaataccgaaatgcattccaat
ggttcgtggagacaggcgatattgcacagagtggtaacaccgaataaagaacacgataag
aagaatggaaaatctgagaattctgatgccaatgagacacctcgcgctgttgctacgcac
agaacgagagaggaactcagggatctatggaagaaagcgattaatcagcaagtgatactg
atacgaatggaaaaagagaatgcaagacttaaagaacgtcaagaggaagcaacggtgaaa
agaatcaaattggaatacgatgaaatcagcagctgtgctcgcgaactcatcgaagtatgg
gatttgctcgttagcaaggaatcccgcgtttctacgaagtgcgacaatcaaatgctttta
catgccattaagcaaggtgtacctaaagggaaaaggggcgaagtctggcaattcttagcg
gaacaattttgtttgaaacaaccgcccatagatactcacgattttccaaactacaatacg
tcttacgatttgttactgaagcaactcacgtcccagcaacatgctattctcatcgacttg
ggacgtacatttccgaatcatcagtatttcagttctcccctaggacccggccaattggca
cttttcaatttgttgaaagcttattctctcctggatcacgaagttggctactgtcagggt
ctcagttttgtggctggtgttcttcttttacacatggtggaagatcaggctttttttctc
ttacgacatctgatgtttcggagaggcctgagaaaactctaccttccagatatggcagca
ttacaattgcacttataccaactatcaagattactgcacgatagactaccggcactttat
gatcattttgacaagcacgaagtgtcaccaactttgtatgcagcaccgtggttgttgacc
ttgtttgccagtcagtttccattaggttttgtaactagagtctttgatttactttttctc
gaaagttcagagataatatttcgagtagccgtggcattattggaggagcatcaggatcag
ttgctttgctgtgacagtttcgaagaaattatggaatatcttaaaacccgtgtaccagcc
gtagataaagccactttggatcgtgtaatgaaacgtgtattctatccggatatggaagtt
tcgaagcaattgaatgaatatagagtggaataccaagtgctacaagaagagatgctatcg
gtaaaaccacagatcgaaagtttagagaaattcaagtcggttaacaaacaactgatgaaa
caagtctctcaattgaacgaacagctcgagataacaatgaacaacttgcaacgtttggaa
atggcacgatctatgcaacaaacggtggtgaataaattggaatctcagaatcgtagcctc
gaagttacagtcgcgactttaggtacttttattcaacacttgaccgaaacgcgagacgat
ctagatttaccaggtgaaatacgtagaatcgtttctcaaattaacattgtcgaaaagcga
agaaacatgagcaaaatatatcctctgaagatattagaagataacagtaagcaagggctc
attaaaagcaattcgggtggtagagattcacaaaatttcttacgaaatagtaacgtgatc
gatcctccctatcctttgaaatctacgttgagtcaaccaaacctggcaacgaagttggaa
agggtatcttctttcttttcgaattcgcacaatcatatacaaaagcaacgtgcacaattg
gcggcccttagaaacgagtacaccgatcaaaatatacgaagcaacaatgatgaaaatgat
ccaaagacggtcaatatagacatacaaatcacggatgcaatgacgtcgcaggacgataac
gtcgaacaaagtgataatcatttgaagattcagtcgattaatttagaaaaatctatctcg
ttaccgctgtcgaacgcgaaactaaagttgaagccctccaagtcggcgtatgagttaggc
tccgttaaaatagtgccaactagcaagatcgaagttaccaatgaagattctttgacaaac
ttgacagggaccgtgcatcctttggatacttgtagcgatgtcaattttcgatacggtgga
accacaaaattaaagtctatcaaaccagttagattatctagtccgagcggtcaaggagat
aacgtaaataagaatactcaaaaccaaaatactgaagctttaaatagataa
DBGET
integrated database retrieval system
