KEGG   Vespula pensylvanica (western yellowjacket): 122634413
Entry
122634413         CDS       T07720                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
vps  Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:vps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vps03000]
    122634413
   04121 Ubiquitin system [BR:vps04121]
    122634413
Transcription factors [BR:vps03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    122634413
Ubiquitin system [BR:vps04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122634413
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH zf-C3HC4 zf_CCCH_4 PaaA_PaaC zf-C3HC4_4 Prok-RING_4 Vesi_VP2 zf-C3HC4_2
Other DBs
NCBI-GeneID: 122634413
NCBI-ProteinID: XP_043679283
LinkDB
Position
14:4985126..4993614
AA seq 907 aa
MPIQAPQWTEFLSCPICCHDFDVAIRGPISLGCGHTICSTCLANLHRKQCPFDQSTINTE
IERLPVNEALLQLVGNTVPTNVATSYQKLLPPEDHANYLVAKRCIEELALYLKPCQTNPT
IAAGMGLVSRPMQRKLVTLVGCQLVEPEGRARAVRAARSLGERSVTELILQHQNPQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYDALRREHDAQIVQIATEAGLRIAPD
QWSALLYGDTGHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLA
AIDPSPETEPPTLAECRAALEAVRTVVAALVEFIQQHGNRKCSDGTHNIGPSQPKYKVSM
CRDLALRGSCPRATNCTFAHSDMELDKYRSKNRKLSIRTNLSLNTNTELKTDKSIVQNNK
VFKQSEEAPYHSIKPHDIHRDSFNSLSKVSPTQHPIISNENNFVGSLTSYMLPPPQNLSH
MVPVKSMDIHCPHYIMPAASLDYNTTDMSMWDLPQVTSGVTNGISNSKKQRTVAKTLAML
LQRRMEILNQLETIVSKQAPQMKMNCDIQGDVLSSNLSIWANSSGSPIGPASNMSCSNNF
RCTDSVLFDDEFVPFDASPSSKYGPISKLSKTMIRSPNGVPPTSLYNEGPPAISTFRPMP
APNSISSWYYGNQPYASIGTNGGMQSVTTSNYGDGYIALGRNISESQTHSHLLQQECMSK
DLILESQKVKQQLKHLEKKINDLKLATQGAAFTAGERLAQELQMIEAGIREKEKDVRNWS
PYGTVPWIQSPANLLTNQSFNQDYKTEEEDTYEAGIANDMRELELRWEFELQEQEKHWSS
EEDNSKK
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgccaatacaggcaccacagtggactgaatttctttcttgcccaatttgttgtcatgac
tttgatgtggccatacgaggtccgatatctttaggatgtggtcatacaatatgcagtact
tgtctagcaaatttgcaccgcaagcaatgccctttcgatcagagtactataaacactgaa
atagaaagattaccggtaaatgaagctttgcttcaactagttggtaatactgttccaaca
aatgttgcaacatcgtatcaaaaattattaccacctgaagatcatgctaattacttagtg
gctaagcgctgcattgaagaattagcgctttatttgaaaccatgtcagacaaatccaact
atagcagcaggaatgggacttgtgtctcgtccaatgcagagaaaattggttacgttggta
ggctgtcaattagtagaaccagagggaagagcacgcgctgtacgagcagctcgaagctta
ggagaaagatctgttacagagctaatattacaacatcaaaatcctcaacagcttagtgcc
aatttgtgggctgctgtacgtgcacgtggttgtcagttccttgggccagcaatgcaagag
gaagttctcaaactagttcttttagctttggaggatggttcagctctttcaagaaaagtt
ttagtaatgtttgtggttcaacgtttggaaccacattttccacaagcatcaaaaacaagt
attggacatgtagtacagcttctttatagagcaagttgttttaaggtatctaaaagagaa
ggtgattcatctttaatgcagttaaaagaagaatttagaacatatgatgctttaagaaga
gaacacgatgcacaaatcgttcaaatagcaactgaagctggattacgaatagctcctgat
caatggtccgctttattatacggagatactggtcataagtctcatatgcaaagtattatt
gacaagctacaaacgccacaatcttttgctcaaagtgtgcaagaattagttattgcctta
caacgtacacctgatccaggacaacttagcagtttaaggccacaactagaattattagct
gcaatagatcctagtccagaaacagaaccgcccacattagctgaatgtcgtgcagcactg
gaagctgttagaactgtggttgcagctttggtggaattcattcagcaacatggaaacagg
aaatgttcagatggtactcataatattggcccaagtcaaccaaagtataaagtaagcatg
tgtagagaccttgctcttagaggatcttgtccgagagctaccaattgtacctttgcacat
agtgacatggaacttgataagtatagatcaaagaatcgaaagttgagtatcagaacaaat
ttatctttgaataccaatacggaattaaagacggataaatctattgttcaaaacaataag
gtttttaagcaaagcgaagaagcaccttatcattccataaaaccgcatgatattcatagg
gatagttttaattcgttgagtaaagtcagtccaacgcaacatcctatcattagtaacgaa
aataattttgttggatctttgacaagttacatgttgccaccaccacaaaatttatcacat
atggttccagtgaaaagcatggatattcattgtcctcattatattatgcctgcagcatct
ttagattataacacaactgatatgagtatgtgggatctgccgcaagtaacatcaggtgta
acaaacggaatttctaatagtaaaaagcaacgaacagtagcaaaaacattggcaatgttg
ttacaacgtagaatggaaattttgaatcaacttgaaactatagtcagcaagcaagctcct
cagatgaaaatgaattgtgacatccaaggagatgtgctttcatcgaatttatcgatatgg
gcaaattcatctggaagtcctataggtcctgcatcaaatatgagttgcagtaataatttt
cgatgtacagattctgtattatttgatgatgaatttgtaccatttgacgcttcaccttcg
agcaagtatggaccaatatccaaattatcaaaaaccatgataagatctccaaatggtgta
ccacctacaagtctatataacgagggtccacctgcaatatctacttttcgacctatgcca
gctcctaattccatttcatcatggtattacggtaatcagccttatgcatctatcggtaca
aacggaggaatgcaatctgttactacatctaattatggagatggatatattgctcttgga
cgaaatatatcagaatcacaaacacactcacatcttttgcaacaagaatgtatgtccaaa
gatttaatcttggaatcacagaaagtaaaacaacaattgaaacatttagagaagaaaatt
aatgatttaaagcttgcaacacaaggtgcagcttttacagctggtgaaagacttgcacag
gagttgcaaatgattgaagcaggtattagagaaaaagaaaaggatgtgagaaattggagt
ccttatggtaccgtaccatggattcaatcaccagctaacttgcttacgaatcaaagtttc
aatcaggattataagaccgaagaggaagatacatacgaggctggcattgcgaatgatatg
cgcgaattagaattacgatgggagtttgaactgcaagaacaggaaaaacattggtcgagc
gaagaagataattcgaaaaagtaa

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