Vespula pensylvanica (western yellowjacket): 122634602
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Entry
122634602 CDS
T07720
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122634602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122634602
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122634602
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
122634602
NCBI-ProteinID:
XP_043679632
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Position
15:3372343..3378131
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AA seq
713 aa
AA seq
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MTEDKTEFDWGNEKLQRAQKTVDESPYDLEAWSVLIREAQNRPITEVRSIFEKLISVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVMFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMAFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATNTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVARNSTGVVPRVPDPEEAIASLPRPDLSQMIPYKPKVNALPGEHPVPGGT
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFSRIQLPDHAPLPIADNGCDTKLFDLA
KSVHWIVDESNDGMSIGSKRRRTRLAGDDSEEEDLPPPPANDIYRQRQQKRVK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggataaaacagaatttgattggggcaatgaaaagttacaacgtgctcagaaa
acggtggatgaatctccatatgatttggaagcttggagtgttctaatcagagaagctcaa
aataggcctatcacagaagttcgatcgatcttcgaaaaactcatttctgtattcccatct
gctggccgctattggaaaatttatatagaacaagagatgaaaatgcggaactttgaaaag
gtcgaaaagcttttccaaaggtgcctcatgaaaatcttaaacattgaattatggaaactt
tacctttcttatgtcaaagagactaaagcgagtcttgcaacgtacaaggagaagatggca
caggcttacgactttgctttggacaaaattggaatggacatacactcctatagtatttgg
aacgattatgttatgttcttgaaaagtgtggaagctgtaggttcatatgctgagaatcag
aaaattagtgctgtccgtaaggtatatcaacgtggcgttattaatcctatgataaacatg
gagcagctgtggaaggattacatggcatttgaacaaaatattaatccaataattgcagaa
aaaatggcaattgaacgatcaagagactatatgaatgctagacgagtcgctaaagaatta
gaagctgtaacgagaggtttaaacagaagtgctcctagtgtacctccaactggtcatcca
gaagaagtgaaacaagttgaattatggaaaaagtatattgcatgggaacgtagtaatcca
ttaagaacagaggatacatcactcgttgcgcgtagagttatgtttgcaatagagcaatgt
ttattatgtttgggtcatcatcctgcagtgtggcatcaagctgctcattttcttgaactc
agttcaaagatattgacggaaaagggagatgtgaatgctgctaaaaatttaagcgatgaa
gcagcaacaatgttcgaacgtgcaacaaatacattgttgtcaaaaaatatgttgttgtat
ttcgctcatgccgattttgaagaaggcagagttaaatatgagaaagtccatcaaatttat
caaaagtttctcgatattcctgatattgatcctacgttggcatatgtacaatatatgaaa
ttcgcaagacgtgctgaaggtataaaatcggctagaactgtttttaaaagagctcgtgaa
gatccacgatgcaaacatcatgtttacgttgctgctgcactgatggagtactattgtacc
aaagataaaaatattgcatttagaatttttgagcttggactgaaaaaattcggcgacaat
cctgattatattctttgttacatagattatttatcgcatttaaatgaggacaataatact
agagttttattcgaaagagtattatcatctggtagtttagaaccagaaaagtcagtcgat
atttggaatcgttttctggagttcgaatctaacataggagatttagccagtatcgttaaa
gtcgaaaaaagacgaagtgccgtattggaaaagatcaaagaattcgaaggaaaggaaacg
gcccaattagtagatcggtataaatttcttgatttgtatccttgcacaccaatggaatta
agatcgatcggatatatggaagtatctagtgtggctagaaattcaaccggagtagtaccg
cgagtacctgatccagaagaagccatagcttctttacctagacccgacttatcacaaatg
attccttacaaaccaaaagtaaacgctttgcctggagagcatccagtacctggtggaacg
tttcctttaccacctgccgcagcacaattatgtacgatgttaccaccacctggttgtttt
agaggaccattcgtagcagtggatctactaatggatgtttttagtagaattcaattaccc
gatcacgcaccattacctatagcggataacggctgcgatacaaaattattcgatctagcg
aaatccgttcattggatcgtcgatgagagcaacgatggtatgagtatcggttcgaaacgt
agaagaacacgtttagctggcgacgatagcgaagaagaagatttaccaccacctccagca
aacgatatttatcgacaaaggcaacagaaacgagtgaaatga
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