Vespula pensylvanica (western yellowjacket): 122634638
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Entry
122634638 CDS
T07720
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vps04121
]
122634638
Ubiquitin system [BR:
vps04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122634638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
122634638
NCBI-ProteinID:
XP_043679700
LinkDB
All DBs
Position
15:complement(186822..231703)
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AA seq
1787 aa
AA seq
DB search
MANGSSTGNNPTSQSNGNTNGGTTSSAGNPGVQPAVDQPAQGGQILDWEYVDRFSFEDSD
HFEEDSLCSWSSETESLCNNWRGWRRPTAGFGTAKRPTDDDPQVPTLCELSARCVASHIP
FELVEHVYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANGSADEFQRGEQLFRSRRVKNP
LQIGFHLSASVNPQVISATSGVARSQSNVAVTFDRRKITSCNCTCTSKAYWCAHVVAVCL
HRIHMPTQVCLRAPVSESLSRLHRDQLQKFAQYLISELPQQILPTAQLLLDELLSAQPNA
INSYCGAPDPTAGASAHDQTSWYLDEKTLHDNIKKILIKFCVPAPIVFSDVNYLSTTAPP
AAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRTDRNAIPLLEIITEECMACEQIIVWWF
NTKVALLNGTGHGGGKHVNMNSNVHASQHACSSLCDEIIVLWRLAALNPGLSPAEREMLH
DQFMAWHMKIIDKVTKSRGTSVSHNSHNKNNSSSYKDSLKNDLTVFVGFKTALEACYLDW
EEYSLPGITYTAESNPMYHCPFTCFRHVGDSGTEVNQVNSSSAVLNCQPPISHHHSRRPV
SLGLVEFSYTDRRRLNPREFPGLCSRGSGGDGNRSSVSSEGFCENDTDMADISEPQLLLR
RGCARLNNCGDTDSQEGGGSESSLNSNVSLKNVQDSNKHCSNVSSESHSDSSESSNNKVA
NEVKCGRTNFVDYRDKSRTATAKATGSKTEQESEQENDASRRQSKDESSSSSSDSPSGDE
YNVYYYDSKATVNNTGNDSKTESPLTIAPSASALLGNLKKTEDPWGIFLARAEGLYAHGH
TREACILCVRLAEELLANPPDLMIEEPPVPLKGKKKKQQVNPASHQLTCLASATLAKCCF
LCTVLAENPEYHNLAFRVGLYGLEMARPPANTKPLEVKLAHQESELVGLLKKIPLSQAEL
NMVRQRAAQLRDGVLRSRGHALLPIILASFIFDTLNTPRGPEVNKEADEALGFDAAVAAL
GLKANVSEADHPLLCEGTRRQRGDLAITLLVHYKDAPAKVARIMNKLLDRDVHQLIKSPI
LSIYYTANPITKPETTTHLPDDECLSPLTGTDVAGNNDNVIGNGSRPHSSTSAELENSMS
ALTLQPPLVQPVPTRTKETRYKSKRVCPSIPNQPSEAGAHFMCELAKTILAKAGGSSSTS
LFTQVSTNQNHHVPHRALHMCAFQLGLYALGLHNCVSPNWLSRTYSTHVSWITGQAVEIG
APAIWFLIESWEGHLTPPEAVSIADKSSRGSDPNMVRAAAELAFSCLPHAHALNPNEVQR
AILQCKEQSDVMLEKACITVENTAKGGGVYPEVLFQVAKYWYELYIRHTPRGEQQDEMPN
DSLQLDLNSALLVEPGPPVDLSAGQMIPGPTQAVVTSTQPPPQPYSAHPTVTTLAPLGTV
QQYYNHEAQIIQQPGVGMPYAVAPYSFVHSHHSIPTFGGPMPSHRVTLPPAPPHMQMYHT
GFPPHPRCPQHPQHPQHPHHPPPAAQPPPVPQYYTPQPPPPPGTHHLFTMQQTMPVNVQA
GVTHGPIPGQSGLPGPALVQSQPIISTVRPQSQVHRQNQPFRQQQFRALVAAYRVGMLAL
ETLARRVHDDRPQAKYARNPPYGEDVKWLLRVSKRLGSQYLHQLCVCTVNSIVSPFVLHE
VALEAAHYLARNNPTLVLQHLRSAPLAPLVHKCQQMYIQCMHQKLYHLAPDDYEDFASVV
CAARAAFHITPEGHTQFKEWLQSIKRSQSCNKDLWAQINAALQQNGK
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggccaacggatcatcaactggaaataatcctacgtctcaatcaaatggaaatactaat
ggtggtactacctcgtccgcgggaaatcccggtgtacaacccgcggtcgatcaacccgca
caaggtggacaaattttggattgggagtacgtcgatcgtttctcattcgaggattccgat
catttcgaagaggattcactttgtagttggagcagtgaaaccgaatccctttgtaacaat
tggcgaggatggcgtcgaccaactgcaggatttggtaccgcaaaaaggccgacagatgat
gatccacaagtgccaacgttatgcgaattatcggcacgatgcgttgcctctcacataccc
ttcgagttggtcgaacacgtttatccacctgtgccggaacaattgcagctgaggatagct
ttctggagttttcccgataacgaggaagacataagactttattcttgtcttgcgaatggc
agtgcggatgaatttcaacgtggcgaacaactctttcgttcgagaagagtcaagaatcct
ctgcaaataggttttcacctcagcgccagcgtaaatccgcaagtaatctcagcaacgtct
ggtgtcgctagatctcaatctaatgtagcagtaactttcgaccgtcgaaagatcacatcg
tgcaattgtacttgcacttccaaagcttattggtgtgcacacgtagttgctgtttgtctt
catagaatacatatgccgacacaagtttgcctaagagcaccagtgagcgaatccttgtcg
cgattgcatcgagatcagttgcaaaaatttgctcaatatcttataagcgaattgccacaa
cagattcttcccactgctcaattactcttggacgaattgttgtcagcccaaccgaatgcc
atcaatagctattgtggtgctcctgatcctacggcaggtgcttccgcacacgatcagaca
tcttggtatctggacgagaaaacgttgcacgataacattaagaaaattcttatcaagttc
tgtgtaccagcgcctattgtgttcagcgacgtaaactatttgagcactaccgcacctccg
gctgcagccgagtggtcgtcgcttcttagaccattgagaggtcgagaaccagagggaatg
tggaatctgctctcgatcgtacgtgaaatgtttaagagaacagatcgtaacgcaataccg
cttttagaaattatcacagaagagtgcatggcctgtgaacaaatcattgtttggtggttt
aacacgaaagtagctctattgaatggtacaggacatggtggcggtaaacatgttaatatg
aacagcaacgttcacgcatctcaacatgcgtgttcctcgctctgcgacgaaattatcgtt
ctttggagattggctgctctaaatcctgggttgtcaccagccgaacgagagatgcttcat
gatcaatttatggcatggcatatgaagatcattgataaagtcactaaaagtcgtggtacc
tcagtatcccataattcgcataataaaaataatagcagtagctataaggattcattgaag
aacgatttaaccgttttcgttggcttcaaaacagctcttgaggcgtgttatttagattgg
gaagaatatagtttgccgggtatcacgtatacggctgaaagcaatcccatgtatcattgt
ccatttacatgttttcgacatgttggtgatagcggtaccgaagtaaatcaggtgaattcg
agttcagcggtcttgaattgtcagccacctatttctcatcatcacagcagacgacctgta
tccttaggtctcgtagaatttagttatacggatagacgaagattgaatccgcgagaattt
ccaggcttgtgttcaagaggcagcggcggagatggaaatcgtagcagcgttagttctgaa
ggtttttgcgaaaatgatactgatatggccgatatttctgaacctcaactactacttaga
cgtggatgtgccaggttaaataattgcggagatacagattcacaggagggtggaggtagt
gaatcctcattgaatagcaacgtgagtttaaaaaatgttcaagactcgaataaacattgt
tcaaacgtatcatcggaaagtcacagtgatagtagtgaaagtagtaacaataaggttgct
aatgaagtaaagtgtggcaggacgaatttcgtcgactatcgtgataagtcgcgtacggca
acggctaaagcaacaggatcaaagactgaacaagaatctgaacaagagaatgatgcttcc
agaagacaatcaaaagatgaaagttcatcctctagcagcgatagcccttctggtgacgaa
tataacgtctattattacgattcaaaggcgacagtgaataatacaggaaatgattcgaaa
actgagtcacctctcaccatagccccgagcgcgagtgcattgttgggcaatctaaagaaa
acagaagatccctggggtatatttcttgctagagcggagggtctttatgcgcacggacat
acacgagaggcttgtatactgtgtgttcgattagcagaagaattattagccaatcctcca
gatttaatgatagaggaacctcccgtgccattgaaaggaaaaaagaaaaagcaacaagtg
aatccagcgtcacatcaattaacgtgccttgcctccgccactttggcaaaatgttgcttc
ttgtgcacggtgctcgctgaaaatcctgaatatcacaatcttgcattcagagttggtctc
tatggtttagaaatggcaagaccgccggcgaatacgaaacctttagaggtcaaattagca
catcaagaaagcgaactcgtgggtttgttgaaaaaaattcccttaagtcaagcagaattg
aatatggtgagacaaagagcagcgcaattgcgagatggcgtattacgatcaagagggcat
gcattgctacccattattttagcaagcttcatattcgatactttaaatacaccgagaggt
ccagaagttaacaaagaagctgatgaagctctcggtttcgacgcagctgttgctgcttta
ggactcaaagcgaacgtaagtgaagcagatcatcctcttctttgcgaaggtaccagacgt
caaaggggcgatttggcgattactcttcttgtacattacaaggatgcaccagctaaagta
gctagaataatgaacaaacttctagatcgtgatgttcatcaattaattaagtctcctatt
cttagtatttactacactgctaatcctatcaccaagcctgagacgacaacacatttgccg
gatgacgaatgtttgtcgcctttaacaggcactgatgttgctggaaacaatgacaatgtt
attggtaatggcagtagaccacacagtagtacaagcgcagagttagaaaatagcatgagc
gcgttaactcttcaaccaccattagtgcaacctgtacctactagaactaaagaaacaagg
tacaagagtaagcgagtatgcccatcgatccctaaccaaccatccgaagctggtgcacat
ttcatgtgtgaattagctaaaactatattagctaaagcaggtggtagcagttcaacttca
ttgttcactcaagtatcaacgaatcaaaatcatcatgtaccacacagagctttgcacatg
tgcgccttccaactgggcttgtacgctcttggtcttcataattgcgtcagtcctaattgg
ttgagtcgtacttattctacacatgtatcttggatcactggacaagctgtggaaattggt
gcgccggctatatggttcctcattgaaagttgggaaggtcatctcactcctcccgaagct
gtcagtatcgctgataaatcttcgagagggagcgatccaaatatggttagagcggccgca
gaattggcattttcttgtctaccacatgctcatgctcttaatccaaacgaagtgcaaaga
gcaattttacagtgtaaggaacaaagtgacgtcatgttggaaaaagcttgtatcacggtt
gaaaacacggcgaaaggtggcggtgtttatccagaagtactttttcaagttgccaaatat
tggtatgagctgtatatccgtcacacacctagaggagaacaacaagatgagatgccaaac
gattctttacagttagatcttaacagtgcccttttagtagaacctggtcctccggtagat
ttatctgcaggtcaaatgataccaggcccgacacaggctgtcgtaactagtacacaacca
cctcctcagccatattctgcacatcccactgtaacgactttggcacccttgggtacagta
caacagtattacaatcacgaagcacaaataatacaacaaccaggagttggcatgccgtat
gcggtagctccctacagtttcgtacattctcatcattcaattccaacgtttggtggtccg
atgccttcgcatagagtaacactacctcctgcaccaccacacatgcaaatgtatcacaca
ggctttccgcctcatcctagatgcccacagcatcctcaacatccacaacatccgcatcat
ccaccaccagctgcacagccaccgccagtgccgcaatactacacaccgcaacctccgcct
ccgccaggaacgcatcatttgttcaccatgcaacaaaccatgccagttaacgttcaagcg
ggagtaacacatggtcctatccccggacagagtggtttgcctggaccagcattagtacag
tctcaaccaattatatcgactgtaagaccgcaatcacaggttcatagacaaaatcaaccg
tttaggcaacagcaatttagggcattggttgcggcgtatcgcgtaggtatgctagccttg
gaaacattagctcgtagagttcatgacgataggcctcaagcaaagtatgcacgtaatcca
ccgtacggagaagacgttaaatggttattaagagtttcgaaacgtttgggttcgcaatac
cttcatcagttgtgtgtctgcacggtgaatagcatcgtcagtccgtttgttcttcacgaa
gtggcactcgaagcagcacattacctcgccagaaataatccaactctggtgttacaacac
ttgagatcggctcctctggcaccgctcgtacacaagtgtcagcaaatgtatattcaatgc
atgcatcaaaagttgtatcatctggcacctgatgattacgaggactttgccagtgtagtt
tgtgcagcaagagcggcattccatatcactccagaagggcacacgcagttcaaggaatgg
cttcaatctatcaaaagatctcagtcgtgcaacaaagatctatgggcgcaaatcaatgcg
gcgttacaacaaaacggcaaatga
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integrated database retrieval system
