Vespula pensylvanica (western yellowjacket): 122634839
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Entry
122634839 CDS
T07720
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03030
DNA replication
vps03410
Base excision repair
vps03420
Nucleotide excision repair
vps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122634839
03410 Base excision repair
122634839
03420 Nucleotide excision repair
122634839
03430 Mismatch repair
122634839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vps03032
]
122634839
03036 Chromosome and associated proteins [BR:
vps03036
]
122634839
03400 DNA repair and recombination proteins [BR:
vps03400
]
122634839
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122634839
DNA Replication Termination Factors
ELG1-RFC complex
122634839
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122634839
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122634839
Check point factors
HRAD17(Rad24)-RFC complex
122634839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
AAA_11
AAA_22
AAA_24
Mg_chelatase
AAA_30
AAA_assoc_2
AAA_14
bpMoxR
ResIII
DUF815
DNAX_ATPase_lid
AAA_19
AAA_5
RuvB_N
SLFN-g3_helicase
MCM
AAA_7
ATPase_2
Rotavirus_VP3
AAA_28
Gp44_lid
AAA_2
Kinesin
Motif
Other DBs
NCBI-GeneID:
122634839
NCBI-ProteinID:
XP_043680121
LinkDB
All DBs
Position
16:4748346..4751595
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKIGKLGVGDTKKPSTSRTKEERNESLTPWVEKYRPRTVEDVVEQAEVVEVLKQCM
DGSDFPNLLFYGPPGTGKTSTILAAARQLFGTMYKERILELNASDERGIQVVRDKVKSFA
QLTAGSMRKDGKKCPPFKIIILDEADSMTHAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEEKIIERLEYICEKESLKAEKPVLVKIVEASGGDLRRAITCLQS
IARLKGKDIEVTINDALEIIGFIPDSWLDNLMDVCKSKDYNKVEAFVEDFLLEAFATSQV
IEQLSERIIYSNEFSDKQKAMIAEKLGQCNYRLLEGGSEYIQLMDLCYCIIKAYN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctttcttaaaaataggtaaattaggagtaggagatacgaagaaaccttctact
tctcgtacaaaggaagaacgaaacgagtcgttaacaccatgggtagagaaatatcgacca
agaacagtagaagatgtcgttgagcaagcagaagtcgttgaagttttaaaacagtgtatg
gatggtagcgactttccaaatttattgttttatggtccacctggtactggtaaaactagt
accattttagcagcagctaggcaattatttggtacaatgtataaagaaagaattctagaa
ttaaatgcttctgatgaaagaggaatacaagtagtaagagacaaggtaaaatcgtttgcc
caacttactgctggaagcatgagaaaagatggaaagaagtgtcctccattcaaaattatt
attttggatgaagcagacagtatgacccatgcagcacaagcagctcttcgtcgtacaatg
gagaaagaatctcatagtacgcgtttttgtttaatatgtaattatgtatcaagaattata
gaacctttgacatcacgttgtacaaagtttagattcaaaccacttggggaagaaaaaatt
attgaacgattggaatatatatgtgagaaagaaagcctaaaagctgaaaaaccagttctt
gtaaaaattgtagaagcatcaggtggtgatttaagacgtgctattacctgtttacaatcc
attgcgagattaaaagggaaagacatagaagttacgatcaatgacgcacttgaaattatt
ggttttatacctgacagttggcttgataatttaatggatgtatgcaaatctaaagattat
aataaagtcgaagcattcgtagaagatttcttattggaggcttttgcaacttcgcaggtt
atagagcagttgagcgaaagaataatttattctaatgaattttctgataagcagaaggca
atgatcgcagaaaaacttgggcaatgtaattacaggttattggaaggaggtagcgaatac
atacaacttatggacctctgttactgtattataaaggcatacaattga
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