Vespula pensylvanica (western yellowjacket): 122634999
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Entry
122634999 CDS
T07720
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122634999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vps03036
]
122634999
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122634999
REST complex
122634999
Heterochromatin formation proteins
Other heterochromatin formation proteins
122634999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
122634999
NCBI-ProteinID:
XP_043680572
LinkDB
All DBs
Position
16:4603275..4621300
Genome browser
AA seq
1556 aa
AA seq
DB search
MKRVRGLDEVASPAATLKPSSVSGGSGLSGGGGLEYHSSSGIGVVVPGQAVRSVTSKEMP
GSIQFGTAQAQQQYTGAIVVPTATPSPIKGTGSTGGLNSTCSGTNVNTGGGLHSGISGGS
NHNMGSQQPTTGSQTQVHTQQQAAIRHKVHSSNVAPLTSTPPGPGLGSGSGSQQFQRLKV
EDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFN
TFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPAK
APPVLQIMQGSGSIHHALTNNISNSSITVHAPSPPPIQAYNNSHVSAAQAQAVSQALSQA
QDGIPTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESG
HISGTSGGSAASNVKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLVSPVIE
RCILNISAMFQSNKTTPVNDHTAIIKKPLSLKATYNNSANVSRDLRESSGTCILERDSRD
HRDRDRERDRPGVREISTGQKLGHSTGQLKRSPSFSTSVTGGNSHIQHGPPPLKKHKVTS
MRDVTIAEAGKYGTLNDYAFFDKVRKALKSQEVYENFLRCLVLFNQEIVSKSELVQLVTP
FLGRFPELLRWFKDFLGHLSDSSNTSANNTGSGVGVEALPNNVARGHQERPQGDLAMEID
YTACKRLGASYCALPKSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEE
FIYRCEDERFELDGVIETNASTIRVLEGVHKKMNRMSQEELQKFKLDDCLGGCSPTIHQR
ALKRIYGDKAADIIEGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLK
SLDHQGINFKQNDVKALRSKSLFNEIETLYDERHEQVDDGSGDNQGNSGPHLVLPYKDKS
VLDDAANLLIHHVKRQTAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDDKEDV
GVAACSNSQSVTMSTSPHGGLQANRSKAPPSPVLSSTSVKVEPDIKIPMHALSNDPEEAY
TLFMGSNNWYLFLRLHHILCERLTKMYERAVALAEEESRYKQQRKESTAVALRLKPKNEI
EIEDYYPAFLDMVKNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVS
DPICQQCMELFQREQRQPKESSGAGGLCITAYMRLGAELSYQRKAEKAMADENCFKIYIY
KKDCKMTMELLDTEGDEAMDSGCREREREGVMVSEKWSTYVERFSAPPVQTSPKDTSAVV
DNEPTTNHPVSSDQAARGVRGRKRKNTDISKKMDGHGWNSLSRILAGRKPVFLYRNVRQW
RKRAAKLMRASMPNINHPEKASEASNKDKALDSVSALLKRPSGLRLTDTNDTSEIIAADE
TQCRFNPNSYQMLYVASKEAFLYKQNSFSRARECHPAVTKHLNSKFHQWLSSWASKNVAD
VQHRLCQDWLMGRYENLIPHRTRVITDNDQTRSPYRQYNRYRVERLQSDVLTEPCV
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgttcgcgggctggacgaggtagcgtcaccagcagcaacgttaaaaccctcg
tcggtgagcggaggaagtggtctaagcggcggtggaggtttagagtatcactcgagcagc
ggaataggcgttgttgtacctggtcaagctgttcgatctgttacttcgaaggaaatgcct
ggaagtatacaatttggtactgcccaagctcaacagcagtatactggtgcgatcgttgta
ccaacggctacaccatcccctattaaaggaactggatctacaggagggcttaattctaca
tgtagcggtactaatgtaaatactggtggtgggttgcacagtggaataagtggtggaagc
aatcacaatatgggttctcaacaacctactacaggatcgcagacacaagttcatacgcaa
cagcaggcagcaataaggcacaaggtacattcaagcaatgtagcgccattgacatctaca
cctccaggtcctggattaggcagtgggagtggatctcaacaatttcaaagattaaaagtt
gaagatgcgttatcttacttggatcaagtgaagtacaaattcagcgatcaaccacaggtt
tataatgatttcttggatatcatgaaagaattcaaatcccagagtattgataccccaggt
gttattacacgagtgagccatttatttaagggacaccctgaactcattgttggtttcaat
acttttctaccaccaggctacaaaatagaggtacaagcaaatgagcaagggtatgcattc
caagtatcagttagtatgcctagtccgactgctactcatacagcaacgttatcgcaacat
cattgtacggtgaatgttggttcaccacccgtagcaagtccaccaacacaaccagcaaaa
gcaccaccagttttgcaaataatgcaaggatctggaagcatacatcacgctttaacaaat
aatatttctaacagtagtataacggttcatgcaccatcaccaccacctattcaagcctac
aacaattctcatgttagtgctgcacaagctcaggcagtaagtcaagctcttagtcaagct
caagatggtattccaactagtggtcaaacgcaacaaagtcaacctgtggaatttaatcat
gctattaactatgttaataaaataaagaatcgttttcaagggcaaccagacaaatataaa
cggttcttagagatactacatacttatcaaaaagaacaacgtaatttgaaagaatcagga
catataagtggtacaagtggtggtagcgctgctagtaacgtgaaacatttaacagaagct
gaggtttatagtcaggtggctaaattgtttgaaaatcaagaagatttacttgctgaattt
ggtcaattcttaccagatgcaactaatcagcagagttcgttggtgagtcctgtgatcgaa
agatgcatattaaatatttctgctatgtttcagagtaacaagactactccagtaaatgat
catacagcaataataaagaaaccattgagtcttaaagcgacttataacaactctgctaat
gtttcgcgagatcttcgggaatcaagtggcacttgtatattggagcgtgatagcagagat
cacagagatcgtgatcgtgagagggataggccaggtgttcgagaaatcagtactggtcaa
aaattgggtcacagtacaggacagttaaaaagaagtccatcattctctacttctgttact
ggtggcaattctcatattcaacatggaccacctccattaaaaaaacacaaagtgacatcg
atgcgagatgttactatagcagaagctggaaaatatggtacattgaatgactatgcattt
tttgataaggttcgtaaggctttaaagtcacaagaagtttatgaaaatttccttcggtgt
cttgtactttttaatcaggaaattgtttctaaatcagaattggtacaattagtaacaccg
tttctcggtcgttttccggaacttttacgttggtttaaagattttctcggccatttatct
gattcttccaatacgtcagcaaataatacgggaagtggtgtaggagtcgaagcacttcca
aataatgtagcacgtggtcaccaagaacgacctcagggtgatttggcaatggaaattgat
tatacagcatgtaagcgattaggagcttcatattgtgctttacctaagtcttacgtacaa
ccaaaatgtactggtagaactcaattgtgcaaagaggttttaaacgatacatgggtatca
ttcccaacttggtcagaggatagtacattcgttacatcgagaaaaacacaatatgaggaa
tttatttatcgttgtgaagatgaacgatttgagttggatggtgtgatagaaactaatgcg
tcgactattagagtattagaaggtgttcataaaaaaatgaatagaatgagccaagaagaa
cttcaaaaatttaaactcgatgattgtcttggaggttgttctcccacgatacatcaacga
gcattaaaaaggatatacggagataaagctgctgatattatagaaggtcttaaaaaaaat
cctgtagttgcagttccagtcgttttacgacgtttaaagagtaaagaagaggaatggcga
gaagctcagaaaggttttaataaaatttggagagaacaaaatgagaagtactatctgaaa
tctttagatcaccaaggtattaattttaaacaaaatgatgtgaaagctttaagatccaaa
agtctattcaatgaaattgaaactttatatgatgagagacatgaacaggtagatgatgga
agtggtgataatcaaggaaatagtggtccacatttagtgttaccttataaagacaaatct
gtcttagatgatgcagcaaatttattgatacatcatgtaaaacgacaaactgctattcat
aaagaagataagcagcgtataaagcttttacttaagcattttataccagatctctttttt
cacccacgccaagagcttagcgatgatgagagagatgaagatgatgacaaagaggatgtg
ggtgtggcagcatgtagtaattcgcaatctgtaaccatgtctacatcgccacatggcggt
cttcaagcaaacaggagtaaggccccaccttccccagtcctgtcttccacttcagttaaa
gtcgaacctgatatcaaaatacctatgcatgccctgtcaaatgatcctgaagaggcatac
actcttttcatgggcagtaataattggtacctctttttgaggttacatcacatcctctgt
gaaagattaactaagatgtatgagagagcggtagcccttgcagaagaagagtctagatac
aaacagcaacgtaaggagagtactgcagtggctctcaggttaaaaccaaaaaatgaaata
gaaattgaggattattatcctgcctttttggatatggtgaaaaacgttttggatggaaat
atggagagtacagcgtatgaagatacattgcgtgaaatgtttggtatacatgcatatatt
gcctttactttggacaaggttgtgacatatgctgtgagacaattgcagcatttagtgtct
gatcctatatgccagcaatgtatggagctatttcaaagagaacaacgtcagccaaaagaa
agtagtggagctggtggattatgcattacagcttatatgaggcttggtgcagagctttca
tatcagcgtaaggcagaaaaagcaatggctgatgaaaattgctttaaaatatatatatat
aaaaaggattgtaaaatgacaatggaactgttggatacagagggtgatgaagcaatggac
agtggttgtagagagagagaaagagaaggagttatggtatctgagaaatggtcaacatat
gtggagaggttctctgctccgcctgttcaaactagcccgaaagacacttctgctgtggta
gacaatgagccaacgaccaatcatcctgtgagtagtgaccaggcagcaaggggggttcgg
ggcagaaagcgcaagaacactgacattagcaagaagatggatggacatggttggaattct
ttaagcagaatcttggcaggacggaaaccagtgtttttgtatcgtaatgtcaggcaatgg
cgtaagagagctgcgaagttgatgagggcatctatgcctaatatcaatcatccagaaaaa
gcttcggaagcatccaataaagataaagcattggatagtgtcagtgcacttttaaaaaga
ccgtcaggtttaaggttgacggatactaacgacacatctgaaattattgccgctgatgaa
acacaatgccgcttcaatccaaatagttatcagatgctttatgttgctagtaaagaggcc
ttcctttataaacagaattcttttagccgagctagagagtgtcatccagcagtgacaaaa
catttaaattcgaaatttcatcaatggctttcatcgtgggcatctaagaatgttgcagat
gttcaacatcgattgtgtcaagattggttaatgggacgatatgagaacttgatccctcat
agaacacgtgtcattacggacaatgatcaaacgagatcaccatatcgacagtacaatcgg
tatcgcgttgaacgtttacaatcggatgtccttacagaaccatgtgtgtaa
DBGET
integrated database retrieval system
