Vespula pensylvanica (western yellowjacket): 122635003
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Entry
122635003 CDS
T07720
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122635003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122635003
03009 Ribosome biogenesis [BR:
vps03009
]
122635003
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122635003
Spliceosome [BR:
vps03041
]
Complex A
U1 snRNP components
U1 related factors
122635003
Complex B
122635003
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
Helicases
122635003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
122635003
NCBI-ProteinID:
XP_043680620
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All DBs
Position
16:1329313..1335689
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AA seq
556 aa
AA seq
DB search
MIRSRSTILGLIKLGTYGSMSGGYRSNGVSHRGGVGQRNGYGSGGSNSRFGSRNGNTGGN
SGSGIAGRGPRNANVAGTNLRKPNWDYENLKPFKKDFYIPHPNVQSRHPREVDLFREENK
ITLKGEKIPNPIQFFEEGNFPDYVMQAIRKQGFTEPTAIQAQGWPIAMSGLNMVGIAQTG
SGKTLGYILPAIVHINSQQPLNRGDGPIALVLAPTRELAQQIQSVVNDFGSLSYVRNTCI
FGGAPKGSQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQ
IRKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYTQLNIGSLTLAANHNILQIVDVCQ
EHEKETKLGTLLQEIGNVNDDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQE
RDYVLREFRNKKGSILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSQSTG
TSYAFFTPQNSRQAKDLINVLQEANQVINPKLAELATRTGGGGYNRNRWGYAARGRENTF
SGTHKRFDSSRNNYNS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatacgatcaaggagcactatactcggattaataaaacttgggacttatggatctatg
tctggtggttatcgcagtaatggtgtgagtcatcgtggaggagtaggtcaacggaatgga
tatggaagtggaggatcaaatagtcgttttggaagtcgtaatggaaatacgggaggaaat
agtggaagcggtattgctggacgtggaccacgtaatgctaatgtagctggaaccaatctg
aggaaaccaaattgggattatgaaaacttaaaaccttttaaaaaagatttttatatacca
catccaaatgtacaatcacgtcatcctcgtgaagtcgatttgtttagagaagaaaacaaa
atcactctcaaaggagaaaaaatacctaatccaattcaattttttgaagaaggaaatttt
ccagactatgtaatgcaggctattagaaagcaaggatttacagaaccaactgctatacaa
gctcaaggctggccgattgctatgtctggcctaaatatggttggtatagcacaaactgga
tctggaaagacattaggctatatattacctgctattgtacacatcaacagtcaacaacct
ttaaatagaggagatggacccattgctcttgttttagcaccaactcgtgaacttgctcaa
caaatacaaagcgttgtcaatgattttggttcattatcttatgtaaggaatacttgcatt
tttggtggtgccccaaaaggcagtcaagcacgtgatcttgaacgtggagtagaaatttgt
attgcgacacctggacgtcttatagatttcttagaacgtggtacgacaaatttacgaaga
tgtacatatttggtattggacgaagccgatcgtatgttggatatgggatttgaacctcaa
attagaaaaatcatagaacagatcagaccagatagacaagttctcatgtggtcagctact
tggccaaaagaagtaagaaatcttgcagaagaatatctcactgattacactcaattaaat
attggatcattaactttggctgcaaatcacaacatccttcaaatagttgatgtatgtcaa
gaacatgaaaaagaaacaaaattgggaactctactccaagaaattggtaatgtaaatgat
gatggtggaaagaccatcatttttgtagagacaaaaaagaaagttgaaaatatcacaaga
aatattaggagatatggttggcctgcagtatgcatgcatggtgataagtcacaacaagaa
agagattatgttcttagagaattcagaaacaagaaaggttctattcttgtagcaacggat
gttgctgcacgtggattggatgttgacgatgtaaagtatgtgatcaacttcgattatccg
tcatcgtctgaagactacatacacagaattggaagaacaggtcgttcgcaaagcacagga
acgagctacgcattctttactccacaaaatagcagacaagctaaagatctgattaatgta
cttcaagaggctaatcaagtcatcaatccgaaattggcagaattagcaacgagaactggt
ggtggcggttacaatcgtaatcgttggggatatgcagcccgtggaagggaaaacacattc
tctggaacacacaaacgttttgacagctcaagaaataattataatagttga
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