Vespula pensylvanica (western yellowjacket): 122635051
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Entry
122635051 CDS
T07720
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03013
Nucleocytoplasmic transport
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122635051
03015 mRNA surveillance pathway
122635051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122635051
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122635051
mRNA cycle factors
P-body specific factors
122635051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
122635051
NCBI-ProteinID:
XP_043680743
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Position
17:complement(3985659..3990018)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSETDNVGQEVEVPAEPDAVSEEDRQYLLEYVKETEQRLTNKEEIRAANLNPTRPPDTYF
SKLDSSLKRNTTFVKKLKNFSMTQLDAVLKDMANLNLTKYVSEVATALVDAKLKMNDISS
AIKACSFLHQTYAEFSAHFFENWQRILSLKIGEKIANPSKLRVDLRFYAELVNAGIFTHK
QGLPLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPRRVRELSEKLNIAIPKS
KLLSPDKQQNVRFLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSAERKEKLES
LQVSYERLLNGVQSYSDTLDEPIPELPVDIEMKAEAEETLKMINEGEENSILEDMWGDEE
TRRFYEVLPDLTVFLPGSYLKEVPKPDVPITEETLDEEITFDELEETEKVDEPEVETEEP
QVSNISNKILLDAFLSHLPNCVNREMIDNAAVDFLINLNTKHNKKKLVKALFGVSRIRLD
LLPFYSRLAAILYPVMPDVANDLCLMLKHDFKYHVRKKDQINIESKIKVVRYIGELVKFK
LYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPDSHQRTKVYLEQMMRKKAV
TALDSRYVTIIENAYYFVNPPESTGGVSKKDRPPIHEFIRKLLYQDLSKTNTDKVLKWMR
KLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHYETIGPHVVDGVLEDIRLC
MEINLPKYNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSMDHSVPSVLDPPDH
LFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYYWFKYTDPIWTTENPFPVGIDYM
YRDTLTMLRPKMQLFQSYKEAQCAIEELRNILYPSLGSTATEDIEHTEGDSDMSVIVEGD
EELLVTSGNGSGDAKGMGDLHFEESEDCSEAQSEEDWTAEAERDDTMGTQENTQGDQSLS
EGGTEGVIMDGTELNAALPAGPKKMTCPEDDDFLSALDKMVSDNIQDRMRDAVKPQQVDI
SVPLHIKSTKKTYEQLQVQSSDNSTVDFILMLRKGNKQQYKNLAVPVSSELAMNLRNREQ
EQKEEKERVKRLTLNITERQEEEDYQETINQGTRPVTVNLNRERRQKYNHPKGAPDADLI
FGPKKIR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacagataatgttgggcaagaagtagaggtacctgctgaacctgatgcagtg
tcagaagaagatagacagtatttactggagtatgtaaaggaaactgaacaaagattaaca
aacaaagaagaaattagggctgctaatttgaatcctacaagaccaccagacacatatttc
agtaaattggactccagtcttaagagaaatacaacgtttgtcaagaaacttaaaaatttt
agtatgactcaattagatgctgttctgaaagatatggctaatttaaatttaacaaaatat
gttagtgaagttgctactgcattagttgatgctaaattgaagatgaatgatatatcgtca
gcaattaaagcttgtagctttttacatcagacatatgcagagttttctgctcacttcttc
gaaaactggcaaagaatactatccttaaaaattggagaaaaaattgctaatccaagtaaa
ctaagagtagatttacgattttatgcggaacttgtaaacgctggaatttttacgcacaaa
cagggtttaccacttcttggctctgtattaacagttttaattaacatggataaagaggaa
cacaataatgcaagcattatattaagtttttgccgtcattgtggagaagattatgcaggt
cttgtccctagaagggtaagggaattatctgaaaaattaaatattgcgatacctaaaagc
aaattactttctcctgacaaacaacaaaatgtaagattcttattacgagattattacaat
tcattgtgtaaacatctgttgaaagaacacaaagaacttcaagcttttgaaaaacaaaat
cgtaaaattttacaaaccagaggtgaattgagtgcagaaagaaaagagaaattagaatcc
cttcaagtatcttatgaacgtctccttaatggagtacaaagttactctgataccttagat
gaaccaatacctgaacttcctgtagatattgaaatgaaggcagaagctgaggaaacatta
aaaatgattaatgaaggggaagaaaatagcattttggaagatatgtggggagatgaagaa
acaagacgattttatgaagtattgcctgatttaacagtatttttaccaggatcatatttg
aaagaagtaccaaaacctgatgttcctattacggaagaaactttggacgaagagataacg
tttgatgaattagaagagactgaaaaagtggatgaaccagaagtggaaacagaggaacct
caagtttccaacataagtaataaaatattgttggatgcatttcttagtcacttgccaaat
tgtgtcaatcgcgagatgattgataatgcagcagttgattttcttataaatttgaataca
aagcataataaaaaaaaattagtaaaagcattatttggtgtttctaggatacgcttagat
ttgctgccattctattctcgtttagctgcaattctatatcctgtaatgccagatgtagca
aatgatttgtgtttaatgctgaaacatgatttcaaatatcatgttcgaaaaaaggatcaa
attaatattgaatcaaagataaaagtggtacgctacataggagagcttgtaaaatttaaa
ctttattcaaaaatagaagcattatattgtctgaaagtattacttcatgattttactcac
catcatattgagatggcatgtaatttgttagagacttgtggaagatatctcttttgttct
cctgattctcatcaaagaacaaaggtctatttggaacagatgatgcgtaagaaggctgtt
actgcattagattcccgttacgtaacaataattgaaaatgcatattactttgtaaatcct
cctgaatcaactggtggagtatctaaaaaagatagacctccaattcatgaattcattagg
aaacttctctatcaagatctttctaaaacaaatacggataaggtacttaaatggatgagg
aagttagactgggaagatgaaagtgtatcttcgtatgctataaaatgtctcaccgctgca
tacaatgtaaaatatttaaatattcgatgtgttggaagtttgttagctggactagtagca
cattatgaaacaataggtcctcatgtggtagatggtgtattagaagacataagactgtgt
atggaaattaatttgcctaaatacaatcaacgtcgcattgccatggttaagtatcttgga
gaattatataattatcgtatggttgaaagtggtgatatctttagaactttgtatctgtta
attacattcggtgtcagcatggatcattccgttccaagtgttcttgatccacccgatcac
ttatttagaattagattagtatgtacacttttagaaacctgtggacaatactttagtgga
ggttcaagtaagaaaaagctcgactactttttggtattctttcaaaattattattggttt
aaatatacagatcctatatggactactgaaaatccctttccagtaggaatagattatatg
tatcgagatacgttgacaatgcttagaccaaaaatgcaactgtttcaaagctataaagag
gcacaatgtgctatagaagaattaaggaatatattgtatccatccctaggaagtaccgct
acagaagacattgagcatacagagggagattctgatatgagtgtaatcgtagaaggagat
gaagaattgcttgtgacatctggaaatggaagtggtgatgctaaaggaatgggagattta
cattttgaagaatctgaagattgttcagaagcacaatctgaagaagattggacagcagaa
gcggaaagagacgataccatgggaactcaggaaaatactcaaggagatcaaagtctatca
gaaggtggtactgaaggagttataatggatggtactgaattaaatgctgctcttccagca
ggtccaaaaaagatgacttgtcccgaagatgatgattttctttctgcacttgataaaatg
gtttctgataatatacaggatagaatgcgtgacgctgtcaagccgcaacaagttgatata
tctgtaccattacatataaaaagtacaaaaaaaacgtatgaacaattgcaagtgcaatca
tctgataattctactgtggacttcatacttatgctgaggaagggtaataaacaacagtat
aaaaatttagctgtgccagtatcatcagaattagctatgaatcttagaaatcgcgaacaa
gaacaaaaggaagagaaagaacgtgtaaaaagattaactctgaatataacagaaagacaa
gaagaggaagattatcaagaaactataaatcaaggtacacgaccggtaacagtaaatcta
aacagagaacgacgacaaaagtataatcatcccaaaggcgcaccggatgctgatcttata
ttcggtccaaaaaaaattcggtaa
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