Vespula pensylvanica (western yellowjacket): 122635085
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Entry
122635085 CDS
T07720
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122635085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vps03009
]
122635085
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
RNases
122635085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
122635085
NCBI-ProteinID:
XP_043680814
LinkDB
All DBs
Position
17:1068137..1073192
Genome browser
AA seq
1220 aa
AA seq
DB search
MLPSTGYFKTINCPFYENGSCERPYCHFKHAKREDAGGTAGMAGVVETQATCQTQTTKAT
AMAASNSDMLQQLVTEAVKKVLADQEVTDTDKFSKTIVSQVVEGLKPSLTSDSASSSETT
ASNIIGKHMNIPTTITKPVPCVYNPTPIAELKKRHIPVVSYMPTRENRVAVKRKSSPDRI
KPWLSVIKDPTSSQTTEITYKPTAISCISDQDSVQSYVPTFKSDSSSSNSYEDSNSNDNI
PKVKEAYYPKLKKRREEYVPKKVKAPLKNVQQLDDTVLDQFEPEFDMIGEILTAATTALS
TVPSEESQDYCLDLEPKFSDDEPIPHDTKEKNVSDVEKTLFHNIEKKEEETVYDTKVVDK
KRKLDDVENELFNNHRNVDDTTEKITSKKLRESNDDARDKHKERTKDEDSIKKSHRSSSR
SSDKQKKDHNRSGKSSKESKSYKSSSTDKQQSSSSSSSSHKDKERSKSSHASKDSTHKSK
ERSGHRNKNSSVERTNKDRHKSSKHEKHRSKTYTSSSKSDKHSSNRSHRNHRSRSRNRSR
SRNRSRSRNRSRTRDRTRSPSKKGKHEENNSDEKNILVNERESLSPSESIPGSFERAIFD
SSDSEHDVQEECLKIFQEYKVSNHPKVVSIKESTKVDTEDSEEVGRKRVAHPSAATSVSR
QVGPSQPLKKLQNPQQKMYERWRLMREAAAEKAAEKAAEKMTTSNKTQISSPPVIQPASA
VNDESVESVSTINNNELQMNGHGRVRIAHVPYAMSLAMKKKQVTENVGKSSDAKAGDSKT
IAQTSKGGVRVAHVPQVVPQLVRPEPLQPTTQKFPLNVRQYYINIMHDVCVQIYTNGEDA
AQRAVREEFACHEKCKALSVYKNSCMLAAHRLRKEVDQNRSSDGSTTIASGTVSHEAVLA
GKSKGSWSVLKTKKAIIEFKGAALYCMLKKWIMTEQQLQDNGFPRVHPEGTKGRAKVYVI
NARNQTVLSKVPNERICSRCGQNYMVDKHGFPVQQQNCIYHWGRKFTIRGEGKYSCCQQY
GSATGCCDAKSHVWDYTDYENLRGYIKTLPKDGSEEEQGVYALDCEMCYTTQGLELTRIT
VINEECNVIYETLVKPQNPIVDYNTRFSGITEEDMKDVTTTLLDVQATLLAMFSNKTILV
GHSLESDFKALRLLHDTVVDTSVMFPHRHGYPQKRALKNLCSEYLRKIIQNDFGGHDSKE
DAVACMELVLWKVKEEAKLQ
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgaccggttatttcaaaacgataaattgtccgttttatgagaacggatca
tgcgaaagaccctattgtcattttaaacatgctaaacgagaagatgcaggaggcacagca
ggaatggctggagtggtggagacccaggcaacgtgtcaaactcaaactacaaaggcaact
gccatggctgcttcaaattcagatatgttacaacaattggtaacggaagctgttaaaaag
gtgctcgcggatcaagaagttacggacacggataaattctctaaaactatagtttctcaa
gtagtagaaggacttaaaccttccctaacttctgactctgcttcttcgtccgaaacaact
gctagcaatattatcggaaagcatatgaatattcctacgactataacgaaacctgttcct
tgtgtttacaatccaacgcctatagcggaattaaagaaaaggcatataccagtcgtttcc
tatatgccaactagagaaaatagagtggctgtaaaacgtaaatcttctccggatagaatc
aaaccttggctcagcgtaattaaagatccgacaagttcgcaaacaacggagatcacttac
aaacctacagcaatatcttgtatttccgaccaagattctgtacagagttacgtaccaaca
tttaaatcggattcgtcctcgtcaaattcgtacgaggacagcaattccaacgacaacata
cctaaagtcaaagaagcttattatccaaaattgaaaaagagaagggaagaatacgttcca
aagaaggtaaaagctccattgaaaaatgttcaacaattagacgatactgtcttggatcaa
ttcgagccggagtttgacatgatcggagaaatactaacggctgcaacaaccgctcttagc
acggtaccgagcgaagaatcgcaagactattgtttagatttagagccaaagttttccgac
gacgaacctataccacatgataccaaagaaaagaacgtatctgatgtcgaaaaaacttta
tttcataatattgaaaagaaggaagaagaaactgtgtatgatacaaaggtcgttgataaa
aagagaaaactcgatgacgtagaaaatgaactatttaataatcaccgtaatgtcgacgat
actaccgagaaaattacaagcaaaaaactaagggaatccaacgacgatgccagagacaaa
cataaggaaagaacgaaagacgaggactcgattaaaaagagtcatagaagtagtagtaga
agtagtgataagcagaaaaaagaccacaatcgctcaggaaaaagtagtaaggaaagtaag
agttataaatctagttcaacggacaagcaacaatcttcgtcgtcatcgtcgtcgtcccat
aaagataaagaaagaagtaagagcagtcacgcttctaaagactctactcataaatcgaaa
gaacgttccggtcataggaacaaaaactcgtctgttgaaagaacgaataaagatagacat
aagagtagtaaacacgagaaacatagatcaaaaacatatacctcgagctcgaagtctgat
aaacattcatccaatagaagtcatagaaatcatcgatcaagatcacgtaatcgatcgaga
tcacgtaatcgttcgagatcacgtaatcgatctagaacgagagatcggacgcgtagccca
tctaagaaaggaaagcacgaagaaaataatagcgatgaaaagaatatattggtcaatgaa
agagaatctcttagcccatccgaatccataccaggttctttcgagagagctatttttgat
tcgtccgattctgaacatgatgtgcaagaggagtgtcttaaaatctttcaagaatataaa
gtttccaatcatccaaaagtagtatccattaaggaatctactaaagtagatactgaagat
agcgaggaagttggtagaaagagagtggcacatccttcggcagctacttcggtatcgcgg
caggttggtccgagtcaaccgcttaagaaacttcaaaatcctcaacagaaaatgtatgaa
agatggcgtttgatgagagaagcagccgcggagaaggccgctgagaaggctgccgaaaaa
atgacaactagtaataaaactcaaatatcatctccgccagtgattcagcctgccagtgcc
gtaaacgatgaatcagtcgagtccgtttcaacgataaataataacgaattgcagatgaat
gggcatggtcgtgttagaatcgcccatgtcccgtatgcaatgtcgctggcaatgaagaag
aaacaagttacggaaaatgtaggcaaatcgagcgacgctaaagcgggcgatagtaagact
attgctcaaactagtaagggaggtgtacgcgtcgctcacgttccacaagtggtaccacag
cttgtgcgtccggaaccgcttcaaccaactacgcaaaagttcccattgaatgttcgtcag
tattatattaatattatgcacgatgtatgcgtacagatttatacgaacggcgaagacgcg
gcacagcgtgctgtacgcgaggaatttgcgtgtcatgaaaaatgtaaagcactttccgta
tataaaaattcgtgtatgttggctgcacatagattaagaaaggaagtagatcaaaatcga
tcttcggatgggagcacaacgatagctagtggtactgtatcgcacgaagccgttctcgct
ggaaaatcgaaaggttcttggagcgtgttaaaaacgaaaaaagcaataatcgagtttaag
ggtgcagcgttgtattgtatgttaaaaaaatggattatgaccgaacaacaattacaggat
aatggatttcctcgtgttcatccagagggtactaagggacgtgctaaagtttatgttata
aacgcacgtaatcaaaccgttctatcaaaagtgcctaacgaaagaatctgtagtcgatgt
ggtcaaaattatatggtggataaacacggatttcctgtacagcaacagaattgtatatat
cattggggaagaaaatttacgattagaggagaaggcaaatatagctgctgtcaacagtat
ggatctgctactggttgttgcgacgctaaatcacacgtatgggattataccgattacgaa
aatcttcgtggttatatcaaaacattaccgaaagatggctccgaagaagaacaaggcgtt
tatgcactcgattgcgagatgtgttataccacgcaaggattagaattaacaaggataaca
gttattaatgaagaatgcaatgttatatacgaaacgctagttaaacctcagaatccaata
gtcgattacaatacaaggttctcagggattacagaagaagatatgaaagatgtaacgacg
acacttttagatgttcaagctacgcttcttgctatgttctctaataaaactatactggta
ggtcatagtcttgaaagtgatttcaaagcactgaggttacttcatgatactgtggtagac
accagtgtcatgtttccacatagacatggttatcctcagaaacgggcactaaaaaatctc
tgttctgagtatttaagaaagattatacaaaatgattttggcggtcatgacagtaaagaa
gatgctgtagcatgtatggagttggtgctgtggaaagtaaaagaagaagcaaaattgcaa
taa
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