Vespula pensylvanica (western yellowjacket): 122635107
Help
Entry
122635107 CDS
T07720
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122635107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122635107
Spliceosome [BR:
vps03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122635107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
WD_LRWD1
WDR54
DAOA
WD40_like
Motif
Other DBs
NCBI-GeneID:
122635107
NCBI-ProteinID:
XP_043680858
LinkDB
All DBs
Position
17:complement(70107..72533)
Genome browser
AA seq
525 aa
AA seq
DB search
MSDDEDLVYVKKQKIVHYGSLEEAERTRLAAAADCSEEEKEAANSNDALNVSSLVGNIHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLASLGEDAIKKKHEEEEKPAHAVERDTESTWYHEGPESLQIARYWIATFSLA
RAKIRLEKARQDFELPGATRTARRQELLKKLQALSIYCSQIGDTRPISFCQFSPNSKILA
TASWSGLCKLWSVPDCTLLRTLQGHTCNVSCIVFHPNVSLSEDVLGDGAGQTCVLASCAS
DGTVKLWSGGKGEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCMSFQWDGSVNATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
YHIATASEDNTCKIWDLRKRSCIYTIPAHTNLLSDVKYQRGEGQYLVTSSYDNTAKIWSN
KTWQPLKTLPGHDGKVMCVDVSPDHKFIATSSYDRTFKLWAPENI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaagatttggtgtacgtgaagaaacaaaagatcgtacattatggatct
ctcgaggaagcagaacgtacgcgtcttgccgcagctgcggactgttcggaggaagaaaag
gaagctgctaattccaatgacgcgctcaacgtatcctccttggtcggtaacatacacatt
tccaacgaatacatggaattggaagatgaaatgtctaaagacaggcaagcgttgttggaa
gagttcgagcgtagaaagaaagccagacagatcaacgtgtccacggacgattcagaggta
aaaaagaatttgagacagttgggcgagcctatatgtttgttcggcgaaggtccggccgac
agacgaaccagattaagagagttattggcgagtcttggggaagacgcgataaagaagaaa
cacgaggaggaggaaaagcccgctcacgcggtcgaaagagacaccgaatctacctggtat
cacgaaggaccggaatctcttcaaatagctcgttactggatagcaacgttttccttagcc
agggcaaaaattaggttagaaaaagcgagacaggatttcgaattgccaggtgctacgcgt
acggcgcgtagacaagaacttttgaagaagctacaagctttatctatatattgttcgcaa
atcggtgacacgagaccgatatcgttctgtcagtttagtccaaattcaaaaattcttgcc
acagcctcgtggtctggcttatgcaaattatggtccgtaccggactgtactctcttacga
acgcttcagggacacacctgcaacgttagctgcatcgtttttcatccaaacgtttcgctt
tccgaggacgtcctaggggatggcgcaggacagacatgcgtattggcatcttgcgcttcg
gacggtacggttaaattatggtccggcggtaaaggcgaagaacctttggcagaagtcgaa
gggcacgaacctcatagagtttcgaggatagccttccatccgtccgggagatttctcgga
acttgttgttacgatgcctcctggcgtttatgggacttggaacaacaggcagaggttttg
catcaggagggtcatgccagagccgtacactgcatgagctttcagtgggacggcagcgta
aatgctaccgggggtcacgattcgttcggtagagtttgggatttacgaacgggtagatgc
attatgttcatggaaggtcatttaaaatctatctttgggatcgatttttcaccgaatggt
tatcacatagcaacggcgagcgaggataatacctgcaagatctgggatctacggaaaaga
tcttgcatatacacgatacctgctcatactaatctgttatccgacgtgaaatatcagaga
ggagaaggacagtatttggttacatcctcgtacgataacacggccaagatttggtcgaat
aagacttggcaaccgttaaagaccttgccagggcacgacggtaaggtgatgtgcgtcgat
gtatctcccgatcataaattcatagcgactagctcgtacgacagaacatttaagttatgg
gcaccagaaaatatctga
DBGET
integrated database retrieval system
