Vespula pensylvanica (western yellowjacket): 122635215
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Entry
122635215 CDS
T07720
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03082
ATP-dependent chromatin remodeling
vps03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122635215
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122635215
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vps01009
]
122635215
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122635215
03036 Chromosome and associated proteins [BR:
vps03036
]
122635215
Protein phosphatases and associated proteins [BR:
vps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122635215
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122635215
SWI/SNF complex
122635215
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122635215
PBAF complex
122635215
SWI/SNF complex
122635215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
122635215
NCBI-ProteinID:
XP_043681108
LinkDB
All DBs
Position
17:1466479..1468490
Genome browser
AA seq
369 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKSKKSMAWVPSL
PNSSHLDAVPQATPINRNRVHNKKVRTFPLCFDDTDPSANLENAAQQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETILEE
QCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcattacgtacttatggagataaacctataagttttcaagtggaggaaaatggagaa
tattattgtattggctccgaagtgggcaattatttgcggctttttcgtggttcattgtat
aaacgttaccctggtatgtttagaagatctataactaatgatgagcgtaaaaaattggta
gaacttggattgagtcaacacgttcttgcatcaagcgtatcacttttaagagctagcgaa
gtagaagatattattgaaggtaatgatgacaaatataaagctgtatctgtgcattcgact
gaacctcctgctcctagagagggaaaatctaaaaagtcaatggcatgggtaccaagtttg
ccaaacagttcacatttagatgcagtaccacaagctacacctataaatcggaatagagtt
cataataaaaaagtcagaacatttccactgtgttttgatgatacagatccatctgcaaat
ttagaaaatgcagcgcaacaggaaatgcttgttccaatacgtttggatatggaaatagaa
ggtcaaaaattaagagatacttttacttggaataaaaatgaaagtcttataacaccagag
caatttgcagaagtattatgtgatgatctagacttaaatccattaacttttgttcctgca
atagcacaagctataagacaacaaatagaagctttcccacaagaaacaattttagaagaa
caatgtgatcaaagagtaataattaaattgaacatacatgttggtaatacttccttagta
gatcaagtagaatgggatatgtcagaaaaagaaaataatcctgaaaagtttgcaatgaaa
ttatgtgctgaattaggacttggtggagaatttgttacagctattgcctatagcgttcgc
ggtcaactatcatggcaccaaagaacatatgcattttctgaagcaccattaccgacagta
gaagtaccatttagacctccatctgaagccgatcaatgggctcccttcttagaaacctta
actgatgcagaaatggaaaagaaaataagagatcaagatagaaatactcgacgtatgcga
agattagcaaatactacacctggatggtaa
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