Vespula pensylvanica (western yellowjacket): 122635244
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Entry
122635244 CDS
T07720
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
122635244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vps04131
]
122635244
Membrane trafficking [BR:
vps04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
122635244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
PAC11
DSE1_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_SCAP
WDR90_beta-prop_4th
WDR72_alpha-sol
TRM82_WD
NBCH_WD40
BBS2_CtH
Motif
Other DBs
NCBI-GeneID:
122635244
NCBI-ProteinID:
XP_043681147
LinkDB
All DBs
Position
17:274446..295513
Genome browser
AA seq
1514 aa
AA seq
DB search
MTAGTSLVVPIVLWGRIAPTHCISCVYLSRDQKTLVTGCYDGQICLWQVDPETLKMTPRC
LLVGHTAPIMCLSRASVIMEQNYIVSSSESGEMCTWDLVDGKCREAVKLNNVHTQMLPYV
SAGGEDVRLFCSGYYPEVLVMDPFSLEVLFTLSSRVNPDWISALHVLRPAKRKGRFYVHT
NDVVLALTTTGTVKVWTLLGHENRNSEPLYEHESKQIRCLNALAMTCCPYNQRTVLIVCS
KYWQIFDAGDFSVLCSITAPRGERWMAGDFLAADRVILWSDEGHGYLYKLPANKLKGKAL
SSSVADNKSFHTAGTEHDQPYLYCILTQPGDKPLSCPPAMRLVTVQRQSKTLKYLLRGDS
EGVVVLWKVPELTAQQLAQICQNDGSSTPTLSPTVKTSLTAAWEAMKPPPVGILDQLDSG
DKNGIKLTASIYLPHQSRLVVGREDGSIIIVPATQTVMLQLLHGNHQQYDDWPPHQVLLG
HSGRVNCLLYPHGAAPRYDRAHLVSGSVDFAVCLWDLYAGTLIHRFCVHAGEITQLMVPP
DNCSPRIQKCICSVASDHSVTLLSLAERKCVVLASRHLFPVVTIKWRPLDDFMIVGCSDG
AVYVWQMETGHLDRVLHGIIAEEVLFACDENTMTAAGGTAAGGELGLANPAVHFFRGLRH
RNLSAIRHATQRGLHQLQQLHGGHGTDHGSQIKAKGSPLMIQGFRSNPKDPESHILFFDI
EALIVQLLSDEYGTMSPGSLESQGLISASEYQKVAALTQSASPDAHKKIADFFGRVKDKA
GDVERILKEKDRHGILAKMKEGAENVHTKLQAKAESVGLKPSTLDGKGDNWNSNDIAKNN
LKRNGAFSEPNATMEVAQLLLSLLHAWGMDPDLDRVCEGKLGLLRPMVPVSFGVLSKGGY
MSLLLPTWQTQLEPAGEPATQLEQRLPVELVRQERLTRAFTARAHWELSTTITSNHLLAV
VALANTLMSMNNATFVPEQERNRKMHRPGNRATVNWNKAEEESEEIYTVQQAQIKQGWSL
LATLHCVLLPDKVTVQGGAKTFKRPQVEMMARRWQHQCLEIREAAQALLLAELGRMGPKG
RKALVDSWSQYLPMYSTQEPIAPQIQNQTPPTSGSPVPMNETQGDDEDEEEELAEEVSVA
RKPSSVAELKRKQTTAVVLLGVIGAEFGQDVTTTNQRRDSEQRRKSSIVEGFGIGNNNLA
RHTSMALTHLLHAPHSPKLPLHTPLRRAAIDLIGRGFTVWEPYLDVSKVLLGLLEMCCDA
DKLVPSMTYGLPLTPQADTCRTARHALTLIATARPAAFITTMAREVARFNTVQQNAQTLN
VNVGASVLTRAKPEILRIVEQLIDKMQSEMSDLLVEVMDIILHCLDPGHLKAKPLSEVFP
AVCRFNQVSHCTATRRIAVGGRGGQLALYELRGNVKCQTVPAHQGPVTALAFSPEGKFLV
SYSCSENKLCFWQQTSSGMFGLGNSQIRCVKSYSTAPINDVTRLNPMRLARLVWINNRTV
TLMLADGSETRFNV
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgacagctggtacaagtttagtagtccctatagtactatggggtcgaatagcgccaact
cattgtatttcttgtgtttatttatcacgagaccaaaaaactttagttacgggatgttat
gatggtcagatatgtttatggcaagttgatcccgaaacgctaaagatgacaccacgatgt
ttacttgtcggtcatactgctccaataatgtgcctaagtcgagctagcgttatcatggag
caaaactatattgttagtagcagtgaaagtggagagatgtgtacttgggatttagttgat
ggaaaatgtcgtgaagcagtaaaacttaacaatgtccatacgcaaatgttgccttatgtc
tcagctggaggagaagacgttagattattttgttctgggtattatccagaggttttagta
atggacccatttagtttggaagtgctattcacactaagttctcgagtgaatcctgattgg
attagtgctttgcacgttctacggccggccaaacggaaaggtcggttctacgtgcataca
aacgacgttgtgttggctctgacaacgacgggtacggtcaaggtgtggacgcttttggga
catgaaaatcgtaacagcgaacctctttacgaacatgagagcaaacaaatacgatgttta
aatgctcttgcgatgacttgctgcccgtacaaccaacgtacggttcttattgtatgctct
aagtattggcagatattcgatgccggcgatttttcggtcctatgttccataacagcgcct
cggggtgaacgttggatggctggtgattttttggctgcagatcgtgttattctctggagt
gatgagggtcatggctatctttataaattaccagctaacaagctgaagggcaaggctctc
agcagtagcgttgcagataacaaaagttttcatacagctgggacagagcacgatcaacct
tatctttattgtattctgactcaaccaggagataagccactgtcttgtccacctgcaatg
agactagttacagttcaaagacagagtaaaacattaaagtatttacttcgcggggatagc
gaaggtgtcgtcgtactttggaaagtacctgaattaacagcacaacaattggcacaaata
tgtcagaatgatggttcctcaacacctacattatcgcccacagttaaaacgagtttaaca
gctgcttgggaagcaatgaaaccacctcctgttggtatcctggatcaattggattccgga
gataagaatggtattaagttgactgccagtatatatctaccacatcaaagtcgtttagtt
gttggccgcgaggatggtagtattattatcgtaccggccacacaaacagtgatgttacaa
ttgcttcatggcaatcatcagcaatatgatgattggccaccgcatcaggtattattaggt
cattcaggacgagtaaattgtcttttgtatccgcatggagcagcaccacgttacgatcgt
gcacatcttgtttctggttccgtagattttgccgtgtgtctttgggacttgtatgccggt
acattgattcatcgattttgcgttcatgccggtgaaattacacaattgatggttcctccg
gataattgtagtcctagaatacagaaatgtatttgcagcgtggcatccgatcatagcgtg
actttattatcattggcggagagaaaatgcgttgttctggcttctcgacatcttttccct
gtagttactataaagtggagaccgttggacgattttatgatagttggatgttcggatggt
gccgtatacgtgtggcaaatggaaactggccatttagacagagtgttacatggtataatc
gctgaggaagtactgttcgcgtgcgacgagaatactatgacagcggctggtggaactgcc
gcaggtggtgaacttggattagctaatccagctgtacatttctttagaggtttaagacat
cggaatctatcggcaattaggcatgcaacgcaaagaggtttgcatcaattgcagcaactt
catggtggccatggtacagatcatgggagccaaataaaagccaaaggatcaccgttgatg
attcaaggttttagaagcaatcctaaggatcctgaaagtcacatattattttttgatatc
gaagcattaatagtgcaattattgagcgacgagtatggcactatgtcaccaggatcgtta
gaatctcaaggattaatctcggcgtccgaatatcaaaaggttgctgccctcactcaatct
gcgagtccagacgctcataaaaaaattgcagattttttcggtcgtgtcaaggataaggca
ggtgacgttgaacgaattttaaaggagaaggaccgtcacggtatattggctaagatgaag
gaaggggcggagaatgtgcacactaaattacaagctaaggcagaaagtgtaggcctcaag
ccgtccactcttgacggcaaaggtgacaattggaacagcaatgatatcgcgaaaaacaat
ctcaaaagaaacggtgcattcagtgagccaaacgcaacgatggaagttgctcagttactt
ctaagtcttttacatgcatggggaatggatccagacttggatcgagtttgtgaaggaaaa
ttgggcttgttaagacctatggtaccagtttcattcggggtgctgtctaaaggaggctac
atgtcattattacttccgacttggcaaactcaattggaacctgccggtgaacctgcaaca
caattggaacaaagattacccgttgaattagtaaggcaagagagacttactagggccttt
acagcgagagctcattgggaattatcaacaactataacgagtaatcatttattggctgta
gtagcattagccaatactttaatgtccatgaataatgcaaccttcgtacctgaacaggaa
cgaaatcgaaaaatgcacagacctggtaatagagcaactgtcaattggaataaagcagaa
gaggaaagcgaagaaatttatactgtccagcaggcacaaatcaaacagggttggtctctt
ttagctactttacattgtgtacttttaccagataaggtaactgtacaaggtggagcaaaa
acatttaagcggccgcaagtagaaatgatggcacgcagatggcaacatcagtgtttagag
atacgagaagcggctcaagctttgctactggctgaattaggtagaatgggtccaaaaggt
agaaaagctctcgtcgacagttggtcacagtatttgccaatgtatagtactcaggaacct
attgcaccacaaattcaaaaccaaactccaccgacgtcgggtagcccggttccaatgaac
gagactcaaggagatgacgaggatgaagaagaagagctggccgaagaagtaagcgtagct
aggaagccatcgagcgtagcggaattaaaacgtaagcagactactgcggtggtattattg
ggcgtaattggtgccgaattcgggcaagatgtcactacgactaaccaaagaagagatagc
gaacaaaggcggaaaagttcgatcgtggaaggttttggaattggaaataacaatctcgct
agacacaccagtatggctttgacgcatctgttacacgcaccgcattctcctaaattaccg
ttgcacacacctctacgaagagctgccatcgacctcattggtagaggttttaccgtatgg
gaaccttatctagacgtatccaaggtacttttagggcttcttgagatgtgttgcgatgca
gataagttggtaccaagtatgacgtacggtcttccgctcactcctcaagctgacacatgt
cgcacggcgcgtcacgctttaaccttaatagctactgctagaccggcagcgttcattacg
acgatggcacgagaagtagccagatttaacacggtgcagcaaaatgcacaaactttgaac
gtcaatgtaggggcaagcgtgttgactagggcaaagcccgagatactcagaatagtggaa
cagttgattgacaagatgcaaagcgaaatgagtgatcttttggtcgaagtcatggatata
atattacattgtttggatcctggtcacttgaaagcaaaaccattgtccgaagtattccct
gctgtttgcagattcaatcaagtcagtcattgtacagcgacgcgcaggatagcagtaggc
ggccggggcggacagttggcgctttacgagcttcggggtaacgtcaaatgtcagacggta
cccgctcatcaaggtcctgtaaccgcattagcattttcgccggagggcaaatttttagtt
agctattcctgttctgaaaataagctttgcttctggcaacaaacaagcagtggtatgttc
ggtctgggtaattcacaaattcgatgcgtcaaatcgtacagtactgcgcccatcaacgac
gtaacgcgactgaatcctatgcgtttagctcgactcgtatggataaacaatcgtacggtc
acattgatgttagccgatggttccgagacccgtttcaacgtctaa
DBGET
integrated database retrieval system
