Vespula pensylvanica (western yellowjacket): 122635296
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Entry
122635296 CDS
T07720
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122635296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122635296
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122635296
mRNA degradation factors
5'-3' decay
Decapping complex
122635296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Helical_RasGEFs
Ctf8
Motif
Other DBs
NCBI-GeneID:
122635296
NCBI-ProteinID:
XP_043681279
LinkDB
All DBs
Position
17:3655731..3663059
Genome browser
AA seq
740 aa
AA seq
DB search
MADSFFGFDTTLLEGIEDGLDCPLEEDDFGEEEYDALNDETFGSEATIGDWEKDHEKLAE
ITESSRSQHKNASDKKNGISVNIEDSLSHLVLDEKEGIVPKPGVWDSPNIPLPKPRPPPS
LATTLKNVCTVEELERGLIANRPPPGLTKPSQLQQQKPEGSFIFEALSLNDKLQINGLPT
SRFPPGLGLPGPHPMVMPPNLRLPHSQFMQHPRLLSNQPANVLRYPLPPHVMLPQGAQRQ
PIHGPFTSNFHHPPHPNLGPPQFLRQDHPMMPPFSSNQGGHQQHSFPHPGNQRNQNRLFY
SNEQQGNHQPFFKNNQYLHRNHDRNNQRYYHYQHHNHPQGINGLNNSGEYDEYAGLMSSR
EKQWLINIQLLQLNTNQPYVDDYYYTVFCDRQNKLNANQEQKDKKHNNNNGFQKDSRNRE
QPQHVASKVVYIPAQFENSLGKLQFSSVTAPRKIIDMDVVPNSDPHSTLQSQQKDTKKTR
QLFLEIERMYTILLKIEDLNNPLAVLSEQQQQQQQQQQQQQQQQDSETETNTVKKTGAEL
ICMMLTSISQLIQDDKIASMLSIRKGKTLLLRFLPLLNVIEYSSQLEDLWTCVLRSLAII
GRRDTHLLTNFYAEFRRWLDTVQDFNTVLRLTRALSESAAQPVKNNSLVFALVNKFGVSV
LASLFERAEKLYPTNETLSSDWSNFIITLVELIGDTSPCVAPCQPVAANTLNQHLSRISS
LKIDRYRVLELLLTDANSSR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggtttcgacacaacgctcttagaaggtatagaagatgggctt
gattgcccattggaggaggatgattttggtgaggaggagtatgatgcattaaatgatgaa
actttcggttctgaagctactattggagattgggagaaagatcatgaaaaacttgcagaa
attacagagtctagtagatcgcagcataaaaatgcttctgataagaagaatggtatcagt
gtcaacatcgaagatagtttatcgcatttagtattagatgaaaaagaaggaattgtacct
aagccaggcgtatgggatagtcctaatataccactacccaaacctcgaccacctccttct
ttggcaactaccttaaaaaatgtgtgtacagtggaagaactggaacggggtcttattgct
aatagacccccgcctggtcttacaaaaccatctcaactacaacaacaaaagccagaaggg
tcatttatttttgaagctttgtcattaaatgataaacttcaaatcaatggcctacctact
tctcgatttccgccaggattaggtctacctggtccacatcccatggtcatgccaccaaat
ttaagattaccgcattcacaattcatgcaacatcctagattattatctaatcaacctgct
aatgtattacgatatcctctaccaccgcatgttatgctaccacaaggagcacaaagacag
ccaattcatggaccatttactagcaattttcatcatccacctcatcctaatttaggacca
ccacagttccttcgtcaagatcatccaatgatgcctccattttctagtaatcaaggtggt
catcaacaacattcttttccacatcctggcaatcaaagaaaccagaatagattattttat
tccaatgaacaacaagggaatcatcagccattttttaagaataatcagtatcttcatcgt
aatcatgatagaaataatcaaagatattatcattatcaacatcacaatcatcctcaagga
ataaatggtttaaataattctggagaatatgatgaatatgctggtcttatgagtagtaga
gaaaaacaatggttaatcaatattcaattgctccaattaaatacaaaccaaccatatgtt
gatgactactattatacagtattttgtgatcgacaaaataaattaaatgcaaaccaagag
cagaaagataaaaaacataataataataatggatttcaaaaagattctaggaatcgcgaa
caacctcaacatgttgcatcaaaagttgtatatatcccagcacaatttgagaattcatta
gggaagctgcaatttagtagtgttactgcgcctcgtaaaataatcgatatggatgttgtt
cccaatagtgatccacattcaactttgcaatctcaacaaaaagataccaaaaagacaaga
caattgttccttgaaattgaaaggatgtatacaatactgttgaaaattgaagatctaaat
aatcctttagctgtgctttcggaacaacaacaacaacaacaacagcaacagcaacagcaa
caacaacaacaggacagtgaaacagagacaaacactgttaaaaaaacaggtgctgaatta
atctgcatgatgttaacgtctatttctcagctaatacaagatgacaaaatagctagtatg
cttagtattcgtaaaggaaagacattgctattgagatttttacctcttttaaatgtaatc
gaatacagtagccaattggaagatttatggacctgtgtattgagaagtttagcaattata
ggtcgtagagacacacatttattgacaaatttttatgccgagtttcgaaggtggcttgac
actgtacaagattttaatacagtactgcgacttacaagagcattatccgaatctgctgct
caacctgtgaaaaataatagtttagtttttgctctcgtaaacaagttcggtgtatctgta
ctagcctcactttttgaacgagcagagaagttatatcctacaaatgaaactttatcttct
gattggtccaattttataattactcttgttgaactaattggtgatacatcaccttgtgta
gctccctgtcaaccagtcgctgcaaatacacttaaccaacatttaagtcggatttccagt
ttaaaaattgacaggtacagagtattagaacttttgttaactgatgccaactcttcacga
tag
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