| Entry |
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| Name |
(RefSeq) collagen alpha-1(IV) chain
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| KO |
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| Organism |
vps Vespula pensylvanica (western yellowjacket)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vps00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122635419
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122635419
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122635419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:vps04147]
122635419
00536 Glycosaminoglycan binding proteins [BR:vps00536]
122635419
Exosome [BR:vps04147]
Exosomal proteins
Exosomal proteins of other cancer cells
122635419
Glycosaminoglycan binding proteins [BR:vps00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
122635419
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
18:complement(474073..486412)
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| AA seq |
1956 aa
MTRLGLRLVASLVCLTGIVSEEYQPGNNTWGSVLPLNASRGDMRGDGGPNGTDDEESSWR
DETQNGGKFHLNSDYVEHDYGNNDQQEYHPEGSRNAGSYGSGRRGYLNNYPYKSETAGRY
GGYSDGEESYGSGNNDDRYRYPPGQREFNRTEYGGGYEGDRGIFRYYGQGQISRTDNVRG
PYDLNRAAVDPSISYNRESGYNAGNSRGQGGYGAAGESENYPSSYSAVPVPGATRSRNCT
GSANCIPKCFAEKGSRGSPGTVGPQGPKGQQGFPGSEGLLGPKGEKGDPGPQGPRGPKGD
RGKMGMPGFPGINGIPGVQGPPGFPGLPGRDGCNGTDGAPGRDGQPGEMGPRGFPGPRGP
KGEKGQPAFAGNFPVGQKGEPGIDGVRGPPGSPGSQGQRGYPGPKGERGSQGAPGIPGPK
GEKGNMGLGFEGLKGDKGQKGEQGPPGTSGPLVPFEGGGSEMAGPPGEPGEKGDRGDMGL
DGQKGEPGIIGDHGLPGALGMKGEKGLPGAPGGRGRDGFSGPPGPPGRKGDRGYDGLDGL
PGRPGQKGEPGHDGLMGVPGLRGPPGPPGGGKGRPGPPGPKGPRGFPGPIGPRGSDGFPG
DPGPKGPIGLQGGPGLQGIPGPEGLSGEKGAKGEPGLTGFPGGAGPRGYDGPPGPVGPRG
LPGEKGLSIMGPKGMDGIPGRDGEKGQKGERGYVGVRGRPGDSLDGIPGSPGAPGLPGEP
GTAGRDGTPGFPGAPGEKGDIGGRCQDCIPGLRGAKGDRGFDGNPGLPGLRGPAGERGFP
GEPGMDGLPGSMGPAGPPGRDGTPGSPGPQGSPGAPGIVTKDMLKLEKGEKGLRGEPGRQ
GPPGLEGPPGEKGRPGLEGFPGLKGQPGDRGFPGQDGTPGRSGTPGRKGEKGNSLKGEPG
EAGRPGAPGAKGEPGLYGEKGEPGMCRPLNWMESLKGNRGPPGDKGEPGPPGEDGLPGDK
GLQGLQGPPGTTGPIGATGPVGPRGLPGPRGEKGNTGPMGFPGEPGRDGLPGHAGIPGGK
GDKGEPGITVKGSPCLPGLPGSKGEKGLPGPPGKEGQVGLPGLTGFTGEKGDVGVPGNNG
LPGIPGEKGDTGPIGPPGPPGVAGTPGADGSKGEPGLPGEQGRPGLPGFPGTKGDRGVPG
IDGPKGYPGRRGLPGTIGRPGIEGVPGLKGERGEKGSPGFPGLPGMEGKPGRPGLSGPKG
DLGPEGLPGAPGLPGYDGPKGDTGPPGLPGRKGEPGQVSEKGQKGEPGMPGVRGPPGPPG
RDGYDGLKGEPGRPGVGRDGLPGLKGEPGIQGRDGLPGLQGPKGDTGVRGFVGLKGDVGL
PGEPGEPGTPGIDGLPGKTGDVGLPGAPGFPGAEGKMGAPGRSGLDGVKGDRGLPGPVGK
PGIPGAPGEKGDKGPPGPTITVKGEKGEPGHPGLSGLPGSKGERGLEGLAGYDGEKGDRG
LPGPVGNPGLPGSMGLKGDQGPSGIPGLPGITIKGEKGLPGLMGKHGRDGFPGLPGEKGE
RGLPGLPGPKGDIGPYGPTGPQGEKGDVGPIGLTGPPGRDGARGLEGVPGLPGERGPKGD
RGQPGLFGAPGQKGEPGLPGQSGLDGIPGEKGDRGWDGANGPPGELGEKGDRGYPGSIGL
MGAVGYIGAKGDKGDDCIPPPIGPKGDRGYPGPVGLPGKPGENGLPGPPGFPGANGIKGA
QGFMGPPGPIGLTGPAGPPGAPGLPGLEGPMGAPGPVGEPGQPCETTPDYLTGILLVRHS
QSQYVPTCEPGHIKLWEGYSLLFTDGDERAHSQDLGYAGSCVRKFSTMPFLVCDVNSVCH
YASRNDRSYWLSTNSPIPMMPAEESAIEEYISRCVVCEVPANVLAVHSQSLNIPDCPSGW
TGLWIGYSFLMHTGAGAQGGGQSLSSSGSCLEDFRATPFIECNGAKGHCHYYSNEFSFWM
ATIEDSQQFQVPRKQTLKAGNLRSGISRCQVCIKNT |
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| NT seq |
5871 nt +upstreamnt +downstreamnt
atgacccggttgggattgcgactcgtcgcatccctagtctgcttgaccgggatcgtcagc
gaggaatatcagcccggtaataacacatgggggtcggtcctacctttgaatgcatcgcga
ggcgatatgcgaggcgatgggggaccaaatggcaccgacgacgaagagtcaagttggaga
gatgaaactcagaacggtggaaaatttcatttgaacagcgactacgtcgaacacgattac
ggaaataacgatcaacaagaatatcatcccgagggatcgagaaatgccggatcttacgga
tccggacgccgaggctatctgaacaattatccgtacaagtcagagacagccggacgatac
ggtggatattcagacggcgaagagtcgtatggatcgggaaataacgacgatcgatatcgt
taccctcccggacaaagagaattcaatcgaacagaatacggaggaggctacgaaggcgat
cgcggcatttttcgctattatggccaaggccaaatttcaagaaccgacaacgttcgaggc
ccctatgatcttaatcgagccgccgtcgatccttccatttcttacaatcgggaatctggt
tacaacgctggtaacagtagaggacaaggtggatacggagccgctggagaatccgaaaat
tatccgagcagttattcggctgtccctgtacctggggcaactcgatctcgtaattgtacc
ggatcggcgaattgcataccaaagtgctttgccgagaaaggatcacgcggttcacctggc
acggttgggccgcaaggaccgaaaggacagcaaggatttcccggatccgaaggtctccta
ggtccgaaaggggaaaaaggcgatcctggtcctcaaggaccacgtggaccgaaaggagat
agaggcaaaatgggtatgcctggttttcccggaataaatggcattcctggagttcaaggt
ccacctggcttccctggacttcctggtagagacggttgtaacggaacggacggtgctccg
ggtagggacggtcaacccggtgaaatgggacctcgaggttttcctggtcctagaggtcca
aaaggggagaagggtcaaccagctttcgcagggaattttccagttggccagaaaggagag
cctggaatagacggcgtacgaggtccgccaggatctccagggtcgcaaggacagcgaggt
tatccgggcccgaagggagaacggggttcacagggcgcacctggtatcccaggaccgaaa
ggagagaaaggtaatatggggcttggatttgaaggattaaaaggagataaagggcagaaa
ggtgagcaaggtcctcctggtacgtcgggacctctcgtgccgtttgaaggaggaggctcg
gaaatggccggaccacctggtgaaccaggagaaaaaggagataggggcgacatggggttg
gacggtcaaaagggagaaccaggaataatcggagatcatggtcttcccggtgcattgggc
atgaagggagaaaaaggtcttcctggagctccaggtggccgtggtagggatggtttctcc
ggacctcccggtccacctggtcgcaaaggtgatcgaggttacgacggattggacggtctt
cctggtcgcccaggacaaaaaggagaacccggtcatgacggacttatgggggttccagga
ttgcgaggaccacctggtccaccaggcggtggcaagggaagaccgggtccaccaggtcct
aaaggcccacgaggttttcctggtccgatcggtcctcggggttccgatggatttccgggc
gatccaggtccaaaaggtcctatcggcttgcaaggtgggcctggtttacaaggaattcca
ggtccggaaggtttgtcgggagaaaaaggggcgaaaggagagccaggacttactggattt
cctggtggtgctggtcctcgtggttacgacggtcctccaggaccggtaggtccgcgaggt
ctacctggagaaaagggattatcgattatgggtcctaaaggaatggatggtatacctggt
cgagatggagaaaaaggtcagaaaggagaacgtggttatgttggagtacgaggccgacca
ggagactccttggatggaattccgggttcaccgggagcacctggattaccaggagagcct
ggaacagcaggaagagatggtacacctggtttccccggggcacctggcgagaaaggagat
atcggtggtcgttgtcaggattgcataccgggtttgcgaggtgcgaaaggtgatcgcgga
ttcgatggtaatcctggtctgccaggtctacgtggacctgccggggaacgcggatttcct
ggagaaccaggtatggatggactaccaggatctatgggaccagcaggaccaccgggaaga
gacggcactccaggatcccctggaccccaaggatctcccggagcacctggaatagttacg
aaggatatgttgaaattggaaaaaggcgagaaaggactgcgaggagaaccaggacggcaa
ggcccaccaggactagaaggaccaccaggagaaaagggtagacccggtttggagggattc
ccaggattaaaaggacagccgggagatcgaggatttccaggccaggatggtacgcctggt
agatcaggaacacctggacgcaagggtgaaaaaggaaatagcttgaagggagaacctgga
gaagcaggaaggccgggagctcctggagcgaaaggtgaacctggactttacggtgaaaag
ggtgaacctggcatgtgtcgacctttgaattggatggaaagtttgaaaggcaatagaggt
cctccgggtgataaaggtgaaccaggacctcccggagaagatggattaccaggtgataaa
ggtttgcaaggacttcagggtcctccaggaactactggtccgattggtgcaactggtcct
gtgggaccacgaggtttacctggtcctcgaggagaaaagggtaacacaggaccaatgggt
ttcccgggtgaacctggtcgtgatggacttccaggacacgcaggtattccgggtggaaaa
ggcgataaaggagaaccaggaataactgtgaagggcagtccttgtttacctggactaccg
ggatcgaaaggagagaaaggtcttcctggtccgccaggaaaagaaggtcaagtcggattg
ccgggattaacaggatttactggtgaaaaaggtgacgtcggcgttccaggtaataacgga
ttaccaggtataccaggagagaaaggagatactggtccgatcggaccgccaggacctcct
ggggtcgccggaacaccgggagctgatggcagtaaaggtgaacccggattaccaggagaa
cagggtagaccaggccttccaggattccctggtacgaaaggggatcgtggagttcctggt
atcgatggaccaaaaggatatcctggacgacgcggattgcctggtacgattggtagaccc
ggcatcgaaggtgtgcctggattgaaaggagaaagaggcgagaaaggatcaccaggcttc
cctggcttacccggcatggaaggtaaacccggtcggcccggcttatcaggaccaaaagga
gatcttggtccggaaggtcttcctggtgcgccaggtttacccggatatgacggaccgaaa
ggtgatacgggaccaccaggattacccggtcgaaaaggggagccaggacaagtatcggaa
aaaggacagaagggagaacccggaatgcctggcgttcgtggacctcctgggccaccagga
agagatggatacgatggtctcaaaggagaacccggaagaccaggtgtaggacgtgacggc
ttgcccggtttaaagggagaaccaggaatacaaggacgcgatggtttaccaggattgcaa
ggtccgaaaggtgacacgggcgtacgaggtttcgttggtttgaaaggggacgtgggatta
ccaggagaaccgggagaaccaggtacgcctggtatcgatggtttaccgggtaaaactgga
gacgtcggacttcctggagcacctggtttccctggagctgaaggaaaaatgggagctcca
gggcgatctggactcgatggcgttaaaggcgatcgcggtcttcccggtcctgttggcaaa
cctggcattcctggtgcacctggcgagaaaggagacaagggaccacctggaccgacgatt
acggtaaaaggagaaaagggcgagcccggtcatcctggcttaagtggactacctggaagt
aaaggggaacgtggtttggaaggcttggccggatacgacggagagaaaggggataggggc
ctgcctggcccggttggaaatcctggattgccaggttcaatgggcctgaagggcgaccaa
ggtccttccggtattcccggtcttcctggaataacgataaagggcgagaaaggtttacca
ggtttgatgggtaagcacggacgagacggattcccgggtcttccaggagagaaaggagaa
cgaggacttcctggattgcccggaccgaaaggagatatcgggccgtacggtcctaccggg
cctcaaggtgaaaagggtgacgtaggccctatcggtcttaccggtccgcctggacgcgat
ggtgcgcgaggtctcgaaggagtaccaggtttaccaggtgaaaggggtccaaaaggagac
agaggacaaccaggactcttcggtgcacctggacaaaaaggagagcctgggctaccaggt
cagagcggtttggatggcattcccggagagaaaggtgacagaggttgggacggagcgaac
ggacctcccggagaactcggtgaaaagggagatcgaggatatcctggttcgataggttta
atgggagccgttggttacatcggtgctaagggtgacaagggtgacgactgtattccaccg
cccataggaccaaagggtgatcgcggttatccaggccctgtcggattacctggaaaacca
ggcgagaacggactcccgggaccaccgggtttcccaggagcaaacggcataaaaggagct
caaggattcatgggaccacccggtccgattggattaacaggtcctgctggtcctcccggg
gctcccggtttgccagggctcgagggtcctatgggagctcctggaccagtcggagagcca
ggacaaccgtgcgaaaccacacccgattatcttaccggtattttactagtccgacacagt
caaagtcaatacgtaccgacctgcgaaccgggtcacatcaaattatgggaaggatatagt
ttattattcacggacggcgacgagagagcccattctcaggatctaggttatgctggttcg
tgtgtaagaaaattctcgacgatgcccttcctagtttgcgacgtcaacagcgtttgccat
tacgccagtcgcaacgatcgttcttattggctatcgacgaatagtccaatccctatgatg
ccagccgaggaatcggcgatagaagaatacatctccaggtgcgtagtatgcgaagttcca
gcaaacgttctggccgtacacagccagtctctaaacatcccggactgtccaagcggatgg
accgggctttggatcggatacagtttcttgatgcacactggcgcaggtgctcagggtggc
ggacagtcgctgtccagttcaggttcgtgcttggaagatttccgggcgactcctttcatc
gagtgcaatggcgcgaaaggtcactgccattattattcgaacgagtttagtttttggatg
gctaccatagaggacagccaacaattccaagtgcccagaaaacagaccttaaaggcagga
aaccttaggtcgggaataagtcgctgccaagtttgtataaagaatacgtaa |
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