Vespula pensylvanica (western yellowjacket): 122636113
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Entry
122636113 CDS
T07720
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122636113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122636113
03009 Ribosome biogenesis [BR:
vps03009
]
122636113
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122636113
Spliceosome [BR:
vps03041
]
Complex A
U1 snRNP components
U1 related factors
122636113
Complex B
122636113
Ribosome biogenesis [BR:
vps03009
]
Eukaryotic type
Pre-60S particles
Helicases
122636113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122636113
NCBI-ProteinID:
XP_043682965
LinkDB
All DBs
Position
20:3539186..3555131
Genome browser
AA seq
755 aa
AA seq
DB search
MYTTAYSNHTSYRSRGSRDFSNRNGGGTAYWNGQQQTQKEYNGKKQNQKKIPGDLLKKPN
WDLATLPVITKNLYIPHVNVLNRTSEEINKFHAGKEITVKGNNTPPPIQAFEESNFPDYV
MEEIKKQGFAEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPATVHINNQPRLNRG
DGPIVLVLAPTRELAQQIQSVAKDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATP
GRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE
VQALAEDFLTDYIQINIGSLTLAANHNIRQIIEICQEHEKESKLSNLLREIGGERGSKVI
IFVETKKKVDDITKSIKREGWSAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGL
DVEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTSNNARQAKELISVLEEAGQ
VINPQLADMANSIRNQFGKGRQRWSYGRFTKDNNSGGSPRSNNSPTINNWQNHQTQTIQH
QNVTNPERMNIRQQNGYQNTRQNTYQPSVYQQQPQPHPQQQQQQQQQQQQQQQQQHQHQQ
HQHQHQHHHQHQQQQPQQHQPQQQQHQQPQQRQPNTNYQGGYQSNGSACQPGYQNNNALR
YPNRTGYQGNRYNSRQNGYSSGQNGQNVYSMPPAFIMPSGGHTDSGIQSLVNNKFFQTNR
PPPNTGACAYQSMGYGQFQAVPPYGYPYPPTQVQQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtataccacagcgtatagcaaccacacaagttatagatcgagaggaagtagagatttt
agtaatcgaaatggtggcggtacagcatattggaatggtcagcaacaaactcagaaagaa
tataatggaaagaaacaaaatcagaaaaaaataccaggagatttattaaaaaaacctaat
tgggacttagctacgcttccagttattacaaagaatttgtatatcccacatgttaatgtt
ttaaacagaacttctgaagaaattaataaatttcatgctggcaaagaaattactgttaaa
ggaaataacactccgcctccaattcaagctttcgaggaaagcaatttcccagattatgta
atggaagagataaagaaacaaggatttgctgagcctactgcaattcaagctcaagggtgg
ccaattgctttaagcggacgagatatggttggcattgctcaaactggttctggaaaaact
ttagcgtacatccttccagcaactgtacatattaataatcaacctaggttgaaccgaggt
gatggtccaattgttttagttcttgctccaacccgagaattggctcaacaaatccaatcg
gtagctaaagatttcggttcttcgtcatgcattcgaaatacatgcatttttggaggttct
ccaaaagggccacaagcgcgggatcttgaaagaggtgttgaaatttgtatcgctacacca
ggaaggctcattgactttttagaaaagggaactacaaacttacgaagatgcacatatctt
gttctcgatgaggctgacagaatgttagatatgggatttgaacctcaaataaggaagata
atagaacagatcagaccagatcgtcaagttcttatgtggtcggcaacatggcccaaagaa
gtacaagcacttgcagaggattttcttactgattacattcagatcaatattggttcgttg
actctggctgcaaatcataatattcgtcaaatcatagagatttgccaggaacatgaaaaa
gaatcaaaactatccaatctattgagagagatcggtggcgagcgtggaagcaaagttatt
atttttgttgaaacgaaaaagaaagtagacgatattacaaagtctatcaaacgagaaggt
tggtcagcgatttctattcatggtgataaatcacaacccgaacgagattacgtcttgtct
gaatttagaaatggaaaaactatgatcttagttgcaaccgatgttgctgcacgtggcttg
gatgtagaggatgtcaaatacgtcattaatttcgattatccaaatagttcggaggattat
attcatagaataggtcgcactggacgttgccaaagtgcaggaacggcttacgcttacttt
acttcgaataatgcgagacaagctaaagaattgatatctgttttggaagaagctggtcaa
gtaataaatcctcaattagcagacatggcgaattctattagaaatcaatttggaaagggt
cgacaacgttggagttatggtcgctttaccaaggataacaattctggtggaagtccaaga
agtaacaatagcccaacaataaataattggcaaaatcatcagactcagaccattcaacat
caaaacgttactaatccagaaaggatgaacatacgccaacaaaatggttatcagaacact
cgtcagaacacttaccaaccgtctgtttaccaacaacaaccacagccacatccacaacaa
cagcagcaacaacaacagcaacaacaacaacaacaacaacagcagcatcaacatcaacag
catcagcatcagcatcaacatcaccatcagcatcaacaacagcaaccgcaacagcatcag
ccacaacagcaacagcatcaacaaccgcaacaacgtcagcctaatacgaattatcaaggc
ggatatcaatctaatggtagtgcttgtcaaccaggatatcaaaataataatgctctccga
tatccaaatagaacgggctatcaaggaaatcgttataacagtagacaaaatggatacagt
agtggtcaaaacggtcaaaatgtatattcaatgccacctgcgtttatcatgccatcgggt
ggacacacagattccggaatacagagtctcgtcaataacaagttcttccaaacgaacaga
ccaccaccgaatacaggagcttgcgcttatcaatcgatgggatacggccagtttcaggct
gtaccgccgtatggttatccttatccgccgacacaggtgcagcagtga
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