Vespula pensylvanica (western yellowjacket): 122636356
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Entry
122636356 CDS
T07720
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122636356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122636356
03012 Translation factors [BR:
vps03012
]
122636356
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122636356
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122636356
Translation factors [BR:
vps03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122636356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
AAA_22
ResIII
nSTAND3
AAA_19
AAA_14
ATPase
PhoH
NPHP3_N
ABC_tran
NACHT
NB-ARC
AAA_34
ATPase_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
122636356
NCBI-ProteinID:
XP_043683428
LinkDB
All DBs
Position
21:648958..660534
Genome browser
AA seq
966 aa
AA seq
DB search
MSYEHASKTSPSSSRFGRENEQSQPNSSMSSSQNQGQFGGRGNGHPSWLRGKEIGLYYRD
LQRNRAKKRELRIIKLKQRVEQTMKLAVENSKGLYNKLCDDEEKRNSTSNDLENKYTHIH
DSQFKRKFLEILSGNIQHNITKAMSVKSKLERDPVSDKNLLDEYNGKLYNSDYKAMQAFR
KKLPAYEKKADIIDLIKKNQVMVISGETGCGKTTQVAQFILDNELEQRNGSITRIICTQP
RRISAISVAERVAAERGERLGKSVGFQIRLEKISPRERGSILFCTTGMLLQFMQSDPALK
GFSHIILDEIHERSTESDFIITLLKQIIPVRPDLKVVLMSATLNSERFSSYYNDCPIIHI
PGFTYPVEEFYLEDVLLLTGFRLVDSSFKEKEPGYRKHQKKYKQQHEKTCHFLNIINPYI
KQLTLEKEYPKFVIDQLCNPDSENLSLELIEELIHHICTTKEPGAILVFLPGMMDIVKLN
RIMLNSERYPNSRYIIYPLHSRMPTIDQRLIFKEPPTGIRKIIIATSIAETSITIEDVVY
VIDCGKTKLSKFDVNKNMETLEPEWVSMANAKQRRGRAGRVKKGYCYHLYTKAREMTFDD
YPLPEMLRTRLEEVILQIKILQLGEAKQFLASVMDPPNLKAIDLSLDLLRTLNALDNDEH
LTPLGYHLAQLPLDPRTGKMIIWAALFSCIDPVFAIAASLTFKDAFYCPLGKEEQAMKKK
LELSMWQFSDHIALAEALRRFEINYSFGFCHEYFLSFNTLKLLSEMKRQFTQHLYEMKFL
DNDNPIDEDANRNSNNIALIKAIVCAGLYPNIATIKHGSDSKHGVIAWTPEDGSVKLHPS
SVNNKMRNFPSPFLTYFTKQRSTAIYLHDTSCVTAPILLFAGSNSSIKRENGKYIITLNT
SQNFVCEPRTAKVIQDLRQAINNLLEYKISHPGTVNWNTQEGQILNALIEFVSQTDEEMG
FGKLTR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgagcacgcatcaaaaacgtcaccaagctcgtcaagatttggaagagaaaat
gaacaaagtcaaccaaattcatcgatgtcatcctcacaaaatcaaggacaatttggtggt
agaggcaatggtcatccttcatggttaagaggaaaagaaataggtttgtactatagagat
cttcaaagaaacagagctaagaaaagggaattacgtattattaaattaaagcaaagagta
gaacaaacaatgaaactagcagttgaaaactctaaaggactgtataataaattatgcgac
gacgaagagaaaaggaatagtacaagcaatgatctagaaaacaaatatactcacattcat
gactcgcagtttaagagaaagtttttagaaattttatctggtaatatacaacacaatatt
accaaagctatgtcagttaaatctaaacttgaaagggatcctgtttccgataaaaatcta
ttggacgaatacaatgggaaattgtataacagcgattacaaagctatgcaagctttccga
aagaagttacctgcttatgaaaaaaaagcggatattatagatttaataaaaaaaaatcaa
gttatggtgatcagtggtgaaacaggctgcggtaagacgacgcaagttgcacagtttatt
ctagataacgaattagaacagagaaatggtagtattactagaataatttgtacacagcca
aggaggatatcggcaatatccgttgctgaaagagtagctgccgaaagaggagaaagactc
ggcaaatcagtgggctttcaaataagattagaaaagatatcgcctagagagcgtggaagt
atattattttgtactactggtatgctcttgcaatttatgcaatccgatccagcgctaaaa
ggattttcgcatataatattagacgaaattcacgaacgtagtacagaaagtgactttatt
atcactttattgaagcaaataattcctgtgagaccagatttgaaagtggttttgatgagc
gctacgcttaattccgaaagattttccagttattataacgattgtccaataattcacata
ccaggattcacatatcctgtagaagagttttatttagaagatgtattattattaacaggt
tttcgtttagtcgatagttcgtttaaagaaaaagaacctggttatagaaaacatcaaaaa
aaatacaagcaacagcacgaaaaaacttgtcacttcttaaatattataaatccatatata
aagcaacttaccttagaaaaagaatatcctaagtttgttatagaccaattatgtaatccg
gatagtgaaaatttatctttagaacttatagaagaattgatccatcatatatgtacgacg
aaagaacctggagctattttagtatttttacctggaatgatggatatcgttaagttaaac
agaattatgttgaactccgaacgatatccaaatagtagatatatcatttatccacttcat
tctcgtatgccaacgatcgatcaaaggctgatatttaaggaaccgcctactggcatacgt
aaaataataatcgcaacgtccatcgctgaaacatctataacgatagaagatgtagtgtat
gtaatcgactgtggaaaaacaaagctttccaaattcgatgtgaataaaaatatggaaacg
ttagaacccgaatgggtatctatggctaatgctaaacaaagacgaggtcgtgcaggaaga
gtgaaaaaaggatattgttatcacctctacactaaggcaagagaaatgacgttcgatgat
tacccactacctgaaatgttacgtacgcggttggaggaagtgatattacagataaaaatt
ttacaattaggagaagcgaaacagtttcttgctagcgttatggatccacctaatttaaaa
gctatcgatttatcgcttgatttattgaggacattaaatgctttagacaacgacgaacat
ttgacacctctaggatatcatttggcgcaacttcctcttgatcctaggactggtaaaatg
attatatgggccgcactattttcttgcatagatccagtatttgcaatagcagccagtctc
acgtttaaggatgctttttattgtcctttgggaaaagaagaacaagcaatgaaaaaaaag
ttagaactcagtatgtggcaatttagcgatcacattgctctcgcggaagctctcaggaga
ttcgagatcaattatagctttggtttttgtcacgaatattttttgtccttcaacactttg
aaacttctttccgaaatgaaacgtcaatttactcaacacttgtacgagatgaagttttta
gataatgataatccaatcgacgaggatgctaatagaaattctaataacatagcattgatc
aaagctatagtttgtgcaggattatatccaaacattgctactataaagcacggatctgat
tcgaagcatggtgtaatagcttggacacccgaagatggttccgtgaaactacatccatcc
agtgttaataataaaatgaggaattttccaagtcctttcttaacttattttacaaagcaa
cgatccactgctatttatttgcacgacacatcttgtgtcacagctccaatattattattt
gctggatcaaatagttcaattaaaagagaaaatgggaagtatataatcacattaaatact
tcgcaaaacttcgtttgcgaacctagaacagccaaagttatacaggaccttcgacaagca
ataaataatttattagaatataaaatttcgcatcctggtacagtaaattggaatactcaa
gaaggacaaatacttaacgctcttatagaatttgtatcccaaacggacgaagaaatggga
tttggtaaattgacacggtaa
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