Vespula pensylvanica (western yellowjacket): 122636724
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Entry
122636724 CDS
T07720
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vps03041
]
122636724
03016 Transfer RNA biogenesis [BR:
vps03016
]
122636724
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122636724
Spliceosome [BR:
vps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122636724
Transfer RNA biogenesis [BR:
vps03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
122636724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
PGK
Motif
Other DBs
NCBI-GeneID:
122636724
NCBI-ProteinID:
XP_043684202
LinkDB
All DBs
Position
1:10560234..10563694
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AA seq
730 aa
AA seq
DB search
MAAFEEMGVLSEIAQAIEEIDWMLPTDVQAEAIPLILGGGDILMAAETGSGKTGAFCLPI
LQIVWETLKDMESGKTSNFTKELSHSTHWGLSLFDRGHALAVTPDGLRCQSREPKEWHGC
RANKGVQGDRKFFFECIPTDEGLCRVGWSTSQASLDLGTDRFGYGFGGTGKKSNAKQFDN
YGEPFGMHCVIGCLLDLSNGIIRFMKNGVDLGVAFTLNSQQKSQIFFPAVVLKNAEMSFN
FGAQPFKYSPPNGYIAISSAPKEYLKLNPINSSHSQSVGSNKPINNAPQAIIIEPSRELA
EQTYNQIQKFKTHLNNPTVRELLVIGGVSVKEQISMLNSGVDIVVGTPGRLEDLIQGGYM
SLTHCRFFVLDEADGLLKQGYTELVDRLHRQIPKITSDGKRLQMIVCSATLHSFEVKKMA
ERLMHFPTWVDLKGEDVVPETVHHVVVIVDPQKDKLWQNLRRNIETDGVHNRDNIKPGNN
TAEVLSEAVKILKGEYCIRAIREHKMDRALLFCRTKLDCDNLERYLKQVGGSEFSCVCLH
GDRKPQERKANLEKFKKREVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRV
GRAERMGLAISLVSSVPEKVWYHGEWCHSRGRNCHNTNLTDQGGCCIWYNEPRYLADIED
HLNVTIEQVGSNIKVPINEFDGKVSYGEKRAVMGTNYENHVHQMAPIVAELTALESKAQL
IYLNRHLIVH
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttgaagaaatgggtgtattatcagaaatagcacaagctattgaagaaata
gattggatgcttccaacggatgtgcaggcagaggctattcctttaattttaggtggaggt
gatatattaatggctgcagaaactggaagtggaaaaactggagcattttgtttaccaatt
ttgcaaattgtatgggaaacattaaaagatatggaatctggaaaaactagcaattttaca
aaagaactgtcgcattctacacattggggattgagtctatttgacagaggtcatgcttta
gctgtgacaccagatggtttaagatgtcagagtcgtgagccaaaagaatggcatggatgc
cgtgccaataaaggagtacaaggagataggaaatttttttttgaatgcatacctacagat
gagggtttatgtcgtgtgggatggtctacttctcaggcttctttagatttaggaacagat
agatttggttatggctttggaggtactggtaaaaagtctaatgcaaagcaattcgataat
tatggtgaaccttttggaatgcattgtgtaattgggtgtttacttgatttatcaaatggc
ataataagattcatgaaaaatggtgtagatctgggtgtagcttttacattgaattctcaa
caaaaatcacaaatttttttcccagctgttgtactgaaaaatgcagaaatgtcatttaat
tttggtgctcaaccatttaagtattctccaccaaatgggtatattgctatatcttcagct
ccaaaagaatatctgaaacttaatcctattaacagtagtcacagtcaaagcgtaggaagt
aataaacctataaacaatgcaccacaggctataatcattgaaccttctcgggaattagct
gaacaaacctataatcagatacaaaaatttaaaacacatttaaacaatcctacagttcga
gaattattagttattggaggagtaagcgtaaaggaacaaatttcaatgttaaattcaggt
gttgatatagtagttggcacacctggtcgtttggaagatctaatacaaggaggatacatg
tcattgacacattgcagattttttgtattggatgaagctgatggattattaaaacaagga
tatacagaacttgttgatcgtttgcatagacaaattcctaagattacatcagatggaaaa
agattgcagatgattgtatgttcagcaactttacattcatttgaagtaaaaaagatggct
gaacgtttaatgcattttccgacgtgggttgatttgaagggagaggatgtagttcctgaa
actgttcatcatgtcgtagtaatagtagatcctcagaaagacaaattatggcaaaactta
agaagaaatattgaaacagatggagtgcataatagggataatataaaacctgggaataac
acagctgaagtattgtcagaggctgttaaaatattaaaaggagaatactgtattcgtgct
ataagggaacataaaatggatagagcattacttttttgcagaacaaaacttgactgtgat
aatttggaacgttatttgaagcaagtaggaggaagtgaattttcatgtgtttgtttacac
ggtgatagaaaaccacaagagcgtaaagcaaatttagagaaatttaaaaaaagggaagta
aagttcttaatttgtactgatgtagcagcaagaggtctggatataactggtttgccattc
atgattaatattactttgcccgatgaaaaatcaaattacgtgcacagaatcggaagagtc
ggtagagctgaacgaatggggctggctatttctttagttagcagtgtaccagagaaagta
tggtatcacggtgaatggtgtcattctcgtggtagaaattgtcataatactaatctcact
gatcaaggtggatgttgtatttggtataatgaacctagatatctggcagacattgaagat
catttgaatgtaacaattgaacaagttggctcaaatataaaggttccaataaatgaattt
gatggaaaagtcagttatggtgaaaaaagagcagttatgggaaccaattatgagaatcac
gtacatcaaatggcacccatcgttgctgaattgactgcactggaatcaaaagcacaactg
atatatctaaatagacatctaatagtacactaa
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