Vespula pensylvanica (western yellowjacket): 122636804
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Entry
122636804 CDS
T07720
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122636804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122636804
03036 Chromosome and associated proteins [BR:
vps03036
]
122636804
Enzymes [BR:
vps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122636804
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122636804
mRNA degradation factors
5'-3' decay
Decapping complex
122636804
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122636804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
122636804
NCBI-ProteinID:
XP_043684330
LinkDB
All DBs
Position
23:complement(284540..289307)
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AA seq
444 aa
AA seq
DB search
MITETHMNSNHMLNSALNTKTELEKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMDHCKILVLDEADKLLSQDFKGMLDHVISKLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVIRPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgataaccgaaacgcatatgaactcaaaccacatgctcaattctgctctcaatacgaaa
acagaattagaaaagatggatgatgtaggttggaaagctaaactaaaaattccaccaaag
gataaacgcataaagacgagtgatgtcactgacacacgtggtaatgagtttgaagaattt
tgcctgaaacgagagttgctaatgggtatttttgaaaagggttgggaaaaaccatctcca
attcaagaagccagtatccctattgcattgtctggtaaagacatcttagcccgagctaaa
aatggaactggcaagactggagcatattcgattccagtgcttgaacaggttgaccctcgg
aaagatgtaattcaagcgctagtaattgtacctaccagagagttagctcttcaaacgtca
caaatctgtatcgaacttgcgaaacatatggatattaaagtgatggtaactactggtggt
accaacttacgtgatgatattatgaggatttatcaaaaagtacaagtaataatagcaacg
ccaggaagaattcttgatcttatggacaaaaacgttgcgaacatggatcactgcaaaata
ttagttttggatgaagcagataagcttttgtcacaagattttaaaggaatgttggatcat
gtcatttctaaattgccacatgaacgtcagattttgctgtattcagctacctttccatta
actgtgaaacagttcatggaaaaacatttgcgagatccatatgaaattaatttaatggaa
gaattaacattaaaaggtgtaacacagtattatgcctttgtacaggaacgacagaaagtt
cactgccttaacacgctattctcgaagttgcaaataacacaaagcataatcttttgtaat
tcgacacaacgtgtagaattactggcaaagaaaataacagatcttggatattgctgttat
tatatacatgcgaaaatggcacaggcacataggaatcgtgtattccacgattttcgagca
gggttatgtcgaaatctggtgagcagcgatttgttcactcgaggtatcgacgtacaagct
gttaacgttgtaatcaactttgactttcccaagatggcagaaacatatctgcatcgcatt
ggtcgatcaggaaggtttggccatttaggtatagcaattaatctaatcacgtatgaggat
cgttttaacttacatcgtatcgaacaagagcttggaacagaaataaaacctatcccaaaa
gtgatagatcccagtttgtacgtaataagaccagaagacaataatagtatggaagaaggt
aatgtgtccaagtag
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