| Entry |
|
|---|
| Name |
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
|
|---|
| KO |
|
|---|
| Organism |
vps Vespula pensylvanica (western yellowjacket)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:vps00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122637054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:vps04121]
122637054
Enzymes [BR:vps01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122637054
Ubiquitin system [BR:vps04121]
Ubiquitin ligases (E3)
HECT type E3
122637054
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
24:2549382..2564093
|
|---|
| AA seq |
2097 aa
MADQQDQLLSGGSVEKASASAGTSKIRGKSSGSGTSGYRKRQSSGIPVPVEEKRRRQTIG
DPQPSQDLDNTSAHRHSIDSSKGEDKIKGERRNHGSGLGPFLDTDWRLQHKVQQSNCGIS
GNTRVRNTRTSLPELNLTAIDCVASRTRSRTPQNSATLLQASSSYNLSLNSGYSNRKSSS
TYNNLASSSSATPVSSNSTTSRERDQTVSLGLRMSECLEGFVSAVKALFPISTQTYHQEG
SKAHGGATCTSSSTSSQILGVKSNVRVGNTASNSVESGGGALAHDGAGTSGITSTATTNP
AVSATATATPAHPHPSQKHPLRSRIKLLSEQPKELPSSNKTSGKHKKDSTTGSCSSSRHR
SSSRARKSMVESTSGGTGNIMSGNESITNSATPTSVSSSIPGSQLVTTTGEDEAGSAVTS
ATASGGPSGLSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGSRMQHLLNRSMGASS
AAKAQQLLAGLQAVDDEGEQLQAVIGMGEILVMGNEDTLTGFPVKQVVAALINLLGIEHN
FVIMTHACRALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHS
KTILHAGGVSACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVAESLPLLTNRLTNQ
DKKSVECVCQAFSRLVDSFQHDPVMLHKIINAELLQNLQQLLMITPPVNSIGNFITVLRM
LSVISNRCPDLAQLLLQQNIAFTLSYLLTGSLEIKTEDVELVPRSPQEWFEITCLIEELM
PPLPTDGIFSVNSLLERTSSQQETVHWEWRDERHCCHPFSTIDSRIIEMAFQNGEDEICL
STLGRTYTIDLTVMKQINEDIGMARSIFRRVNAHPVEGKSPTCSSSMDVVPPVIETNEWL
VSFIRTLFSVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVSSHIAGML
ASQDLRIVIGALQMASILMKRLPQVFGVHFHREGVLHQIRQLADPEIPLGVSPPKCSSGT
SLPSPQPGPSTPISSTMMLSSSSATSPIASPSTNGNILFGAVATCQMKPNLTPSMDTHSR
TDLNTTVEDASTPQSAHLRIGDVLKRKRQNKKGRFSRLGGTTTQQTQQPESLFTGFTQKN
NRFLGNLNPARWGRKSSSSSTVSDKRDTSSSTSLSKPPSNPNLSGGNRDKAKAWVREQAA
QFLARYQDDAPCTHPALTVLARLTAAIQRLQSNQLDEMFSALTELRDIVLESDISPFEMN
YSGLIKALLNYLTTTDAPGNRYDRLRMFWQLFAESTIQQDNNVVDLQPGAFGALVAKLNS
CVAQLEQFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTVKI
DPLALVQAIERYLMVRGYGRIRDAESLVSDDDNSEDDIDDTLAAVVISQGSAKHKLQFLI
GDEVLPFNMTVYQAVRQFGCSGIDHSEAEADGEPPLGHDAVWVQTHTIYYRILLIFDSSD
CRSLQQVYKPVPEDEATTSSKPGSSSQCGSRKGKGKSTKISSKRKEDSLWLEGIVPAQRC
PLTPYLSPSLPPSVTISDASLDGLCLLRLLHALNRHWGVLFPHLKSMSLLSPQDFINNKI
AAKASRQLQDPLVIMTGNLPSWLQQIATVCPFLFPFETRQLLLYATSFDRDRALQRLLDS
APELSGSDSQERVTPRLERRKRTISRTDILKQAEQVIQDLASSKALLEVQYVNEVGTGLG
PTLEFYALVSKELQRADLDLWHGSSNPTETGYVNPIHGLFATPIPWSTKVSHLAKLKTKF
KFLGKFMAKAIYDSRMLDLPFSLTFYRWLLGEEHTLTLADLVYVCPDIHRTLTKLQEVVR
RKEIMEKDQTLRMTERAQRIEALDLDGCPISELGLVFELPGYENIELRKGGSDIPVTIHN
LDQYIKLVTHWFLYEGVFRQMEAFREGFESVFPPAQLRLFFPEELEAVFCGHTQGGGQWD
TKTLLECCRTDHGYTPDSRAIRFLFEVLSKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPP
LTIVRKTFDPSMKTDDFLPSVMTCVNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS |
|---|
| NT seq |
6294 nt +upstreamnt +downstreamnt
atggcagatcaacaagatcagttgttgtcaggggggtctgtagagaaggccagtgcttca
gcaggtacctctaaaattagagggaaaagctcaggcagtggtacaagtggctatagaaag
cgacaaagtagtggtatcccagtgccagtagaagagaaaagacgtagacaaactattggt
gatcctcaaccatctcaggaccttgacaacacatctgcacatagacattctatagattct
tcaaaaggagaagacaagataaagggtgaacgcagaaatcatggaagtggtttaggacca
ttcctagatacagattggagactgcaacacaaggttcagcagtctaattgtggtattagt
ggtaatacaagagttcgcaacacgaggacaagtttgccagagttaaacttgacagctata
gattgtgtagcttcgaggactcgttctcgtaccccacaaaattcagcaactttattgcaa
gcaagcagtagctacaacttatcattaaatagtggctatagtaatcgaaaatcatcttcg
acgtacaacaacttggcatcatcatcgagtgctactcctgtttctagcaattcaactaca
tcaagggaaagagatcagactgtatcattaggcctgaggatgagcgaatgtctggaagga
tttgtgtctgctgtcaaagcactttttccaatatcaacacaaacgtatcatcaagaaggg
tccaaagcacacggtggtgcgacctgcacaagtagcagtacgagtagtcaaatcttgggt
gtgaagtccaacgtcagagtgggtaacacagctagcaattctgtggagagtggtgggggg
gcgttggcacatgacggggcaggcactagtggcattacatcaacagccactactaatcca
gctgtgtctgccaccgctactgccacccctgcacaccctcatccttcacaaaaacatcca
cttcgttcgcgtataaaacttttaagtgaacaacctaaggaactgccatcgagtaacaag
acttcaggaaaacataaaaaagattccacaacgggttcttgttctagctcaagacatcgc
tcttcgtcacgagcacggaagtcaatggtggaaagtacttctggaggtaccggaaatata
atgtcagggaatgaatctattactaacagtgctaccccaacatctgtatcatcttctatc
cctggtagtcaattagttactactacgggtgaagatgaagcagggtcagctgtaacatct
gctactgcgagtggaggaccatctggattatctggtacaacaggagatagtgaaagtgat
gatggtgaagttgggagattacaagcattattagaagctagaggtttacctcctcatgta
tttggtgcattggggtcacgaatgcaacatcttttgaatagaagtatgggagcaagctca
gctgcaaaagcacaacagctcctagctggtttacaagctgttgatgacgaaggcgaacaa
ttacaagctgtcataggaatgggagaaatacttgttatgggaaatgaagatacattaaca
ggttttcctgttaaacaagtggttgcagctttaataaatttacttggaatagagcacaac
ttcgttataatgacacatgcttgtcgtgctttgacatacatgatggaagctttgcctcga
tcttctaccgttgttgttgatgctgtaccagtatttctacagaagctagaatcaattgaa
tgtatggacgtcgctgaacaatgcttaacagctttagctatgttatcccgtcgacatagc
aaaacaatattacacgcgggtggtgtatcagcttgtttgaaatttgttgacttcttcaat
atcacggctcaacgcgcagcattaacaattacagctaattgctgtcaaaatcttcatcct
gacgattttcatctagtcgcagagagtttaccattgttaacaaacagactgacaaatcag
gataaaaaaagtgttgaatgtgtttgccaagctttcagtcgattggttgatagctttcaa
catgacccagttatgctacataaaattatcaatgcagaactacttcaaaatttacaacag
ttgcttatgattacaccacctgtaaacagtattggcaacttcataacagtgctacgaatg
ttatctgtgatatcaaatcgctgtcctgatctggcgcagctgcttttacaacaaaatata
gctttcacgttaagttatcttttaactggatctttggaaataaaaactgaagatgtagaa
ttagtaccacgttcaccacaagaatggtttgaaattacttgtttaatcgaagaacttatg
cctccgctaccaactgacggtatattcagtgtaaatagtttactcgaaaggaccagtagt
caacaagaaacagtccattgggagtggcgtgatgaaagacattgctgccatccattcagc
actattgattctaggattattgagatggcatttcaaaatggagaagatgagatatgcctt
tctactctagggaggacatatacaatagatttgactgtgatgaaacagattaatgaggat
attggaatggcacggagtatatttcgtagagtgaatgcccatcctgttgagggtaaaagc
cctacttgctcatctagcatggacgtagtacctccagtgatcgaaacaaatgaatggttg
gtatcttttatacgaactttattctccgtactctacgaagtgtatagtagttcagccggg
cctgctgtaaaatgtaaatgtttacgtgcacttcttcgtatggtatattatgcctccact
gatttattaaaggatgttttgaaaaatcaagttgtatcatcgcatatagcaggaatgtta
gcgtcgcaagatttacgaatagttataggagctctacaaatggcaagtatcttaatgaaa
agattaccgcaagtatttggggtccatttccatcgtgaaggtgtcttacatcaaatacgg
cagctagctgatcctgaaatacctcttggagtttcaccgcccaagtgctcttctggtaca
tcattaccaagtccacaaccaggtccatctacacctatttcttccaccatgatgttgtcc
tctagtagtgctacgtctcctattgcttctccatcgacaaatggtaatatattatttggc
gcagttgcaacatgtcaaatgaagccaaatcttaccccttcaatggatacacatagtagg
acagatttgaataccaccgtagaagatgcaagtacaccgcaaagtgctcatctaaggatc
ggagatgttttgaaaagaaaacgtcaaaacaagaaaggtcggttctctagattgggtggt
actacgacgcaacaaacccaacaaccagaatcacttttcactggttttacacaaaagaat
aatcgatttttgggaaatcttaatcctgctagatggggaagaaaatcgtcatcgtcaagc
actgttagtgataagagagacacaagttcttcaaccagtttatcaaaaccaccaagtaat
ccaaatttatcaggtggtaatcgggataaggcaaaagcatgggtacgcgaacaagctgct
caattcctagcaagatatcaagatgatgcaccttgcacccatccagcgttaacggttctt
gcgcgacttacagccgcaatacaacgattacaatcaaatcaattagacgaaatgttctca
gctcttaccgaattacgagatattgtactagaaagtgatatatctccctttgaaatgaat
tatagtggtcttataaaagctttgttgaactacctcacaaccacagacgcacctggaaat
cgttacgatcgtttacggatgttctggcaactatttgcagaatctactatacagcaagac
aacaatgtcgtagatcttcaaccgggagcattcggtgctcttgtcgcaaaattgaacagt
tgtgttgcacagttggaacaatttccagtaaaggttcatgatttaccagcaggatccggt
gctggacgtggaggaactagtgctcttaaatttttcaatacgcatcagttgaagtgcaat
cttcagcggcatccagattgtaataatttaaaacaatggaagggaggtactgtaaaaata
gatcctcttgcgttagtgcaagcaatagaaagatatttaatggttcgtggctacggtaga
atacgggatgcagaatctttggttagtgacgatgataatagcgaggatgatatagatgat
actttggcagcagttgttataagtcaaggctctgcaaaacacaagctccaatttttgata
ggggatgaagtattaccttttaatatgaccgtataccaggcagtaagacaatttggttgt
tctggtatagatcattcagaagcagaagcagatggtgaacctcctttgggacacgatgca
gtatgggtgcaaacccatacgatatattacaggatactcttgatctttgactcatctgat
tgccgaagtttgcaacaagtgtacaaacctgtaccagaggacgaggctacgacatcttcc
aaaccagggtcgagttcacagtgcggtagtagaaaaggcaaaggcaagagtacaaagatc
agttcaaagcgaaaagaagatagtctttggttggaaggaatagttccagcgcaacgatgt
ccacttactccttatctatctccatctttgccaccatctgtaaccatatcggatgcttct
ttagacggcttatgtctattgcggcttctacatgcacttaatcgtcattggggagttcta
tttcctcatctgaaaagtatgagcctattatctccacaagatttcataaataacaagata
gcggcaaaggcgagtagacaactgcaggatccgttagttattatgactggaaatttgcca
tcatggttgcagcaaatagcaacagtatgcccctttctatttccatttgaaacaaggcag
ttgctattgtacgcaacatcttttgatcgtgatagagcactccaacgtcttctagactct
gctccagaattgtcaggatctgatagtcaagaacgtgttactccgcgtttagagagaaga
aaaagaactatttcgagaacggacattttgaaacaagcggaacaagttattcaagattta
gcttccagcaaagctcttcttgaagtgcaatatgtcaacgaggtcggaactggcttgggc
ccaactttagaattttatgcgctagtctctaaagaacttcaacgtgctgacttggatctc
tggcatggtagttcaaatcctacggagacaggttacgttaatcctatacatggactcttc
gcaacgccaataccgtggagtactaaagtatcgcatcttgcgaaactcaaaacgaaattt
aaatttcttggtaaatttatggcgaaggcaatatatgattcaagaatgttggatctacca
tttagtttaacattttatcgttggttattgggagaagaacatacgcttactttagcagat
ttagtatacgtttgtcctgatatacatcgtaccctcacgaaattgcaagaagtggtaaga
cgaaaagaaataatggaaaaggatcaaactttaagaatgacggaaagagcgcaacgaatc
gaagcgcttgatttggacggttgtcctatttctgaacttggacttgtcttcgaattacca
ggttatgaaaatatagaactaaggaaaggaggaagtgatatacctgtcactattcataat
ttggatcaatatatcaagttggtaacacattggttcctctacgaaggagtttttagacaa
atggaagcatttcgagaaggattcgaatcggtatttccaccggcacaattacgattattt
ttcccagaagaattggaagctgtattctgcggacacacacaaggtggtggtcaatgggat
acaaaaactcttttggaatgttgtcgtacagatcatggttatactccagattctcgggct
atacgtttcttatttgaagtcttatccaaatacaatagcgaggagcaaagacaatttatt
caatttgttactggatcaccacgattacctgttggaggctttaaaagtttgaccccaccc
ttaacgatagtgcggaaaacttttgatccatctatgaaaaccgatgactttttaccatct
gtaatgacttgcgtaaactatttaaaattgcctgattatactaccttggaaataatgcgg
gaaaaattaagaatagcagcacaagaaggtcaacactcattccacctttcctag |
|---|
