Vespula pensylvanica (western yellowjacket): 122637369
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Entry
122637369 CDS
T07720
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03030
DNA replication
vps03410
Base excision repair
vps03420
Nucleotide excision repair
vps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122637369
03410 Base excision repair
122637369
03420 Nucleotide excision repair
122637369
03430 Mismatch repair
122637369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vps03032
]
122637369
03400 DNA repair and recombination proteins [BR:
vps03400
]
122637369
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122637369
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122637369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
BRCT_2
AAA_22
RuvB_N
AAA_30
AAA_14
DUF948
MCPsignal
AAA_18
DUF1824
PTCB-BRCT
AAA_33
AAA_assoc_2
COG4_N
AAA_5
RCF1-5-like_lid
AAA_17
YtxH
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
122637369
NCBI-ProteinID:
XP_043685400
LinkDB
All DBs
Position
25:2241028..2246348
Genome browser
AA seq
1025 aa
AA seq
DB search
MPRDIRSYFTCTTKKSTDQSTDKSANKSMGKSTVKKKKRAIISSDEEDTKSCAVVKRTKL
TKKINKHHVLSDSDDEVQINSSTKNKKAEVQLVNDVKNVSHIKNEPENTISPAEMFSKTS
VTRETIPRVKKKPKKQEAKTHLDDEFEFTLSKLDTTIIEKEYLQNVDEDEPQNKDDRKDE
KEKKHNKSVDDEISYKKQDIKQGDKSSSNKEFSFTNVEHNIDKKMKNSPKKSLKRSNHTS
TIEIEPKRSRKENANSSISDEYEERIQMKKQNSILYQKYLQRGGARNPGSKEVPQGAEYC
LAGLSFVITGVLDSLEDNEAKELITKYGGRILHQVSKNTDYLIVGEEYGPVKMAKANELK
IKKISEDDLLELIRTRPKGKAEDVKQSRARSKEKPMSKVEPCVMPKLHKTMKETMEPIKR
TVEPVKETAELVNETVKSVKETVESVKETAKPVKNIESSVTKLDTEVANNTIITENCEAL
VDKYRPKTMKQILGQQGDKSSAKKLYTWLLNWHKNQNGTKKHIKPSPWAKNDDGAFFKAA
LLSGSPGIGKTTTAQVVSNELGFDLLEFNASDTRSKKLLKEGVSEILSNTTIKTYFSNQK
GEEKAKHVLLMDEVDGMAGNEDRGGLQELVSLIKSTDVPIICICNDRNNPKMRTLSNYTF
DLKFQKPRLEQIRAAMKSICYKENIQISTEQLDRLIESTNQDIRQVINHLSLVEKSDIVK
KTDSKPNKDLKLGPWDVVKKVLSFEENKNMSINEKSDLFFHDYNIASLFVQENYLSVMPT
APKTELLERVAQAAESIALGDDIEKEIRSNNAWSLLPIQACFSSVIPGNMMSGDIKNQIN
FPSWLGCNSKKNKFDRLLQEITVHTRLTTGASKEAVNLDYLNHIRDAIIRSLVNGAEGVD
EAVKVMNHYHLLREDLDSLNEVSLWPGQRNSLQAVDSKVLAAFTRTYNKKSGGVPYTINS
SKVKKSTMASQENLEFVEDDINSDEEEDNINTDKMIKAKKPTAKNTKETEKKSSEKPSTK
RGKKK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgatatacgatcttatttcacttgcactactaaaaaatctacggatcaatct
acggataaatctgcgaataaatctatgggtaaatctactgtcaaaaagaaaaaaagagca
ataatctcgtctgacgaagaggacacaaagtcatgtgctgtggtaaaacgtaccaagttg
acaaagaaaattaacaagcatcatgttttatctgattctgatgacgaagttcagataaac
tcaagtactaaaaataaaaaggctgaagtccaactggttaatgatgtaaaaaatgtatct
catatcaaaaatgaaccagaaaacacaatttcaccagcagaaatgtttagtaaaacatca
gtgacaagagaaacaataccaagagtgaagaagaagccgaagaaacaggaggctaaaact
cacttagatgacgagtttgaatttacattgagcaagttagatacaacaataattgaaaaa
gaatacttacaaaatgtcgatgaagatgaacctcaaaacaaagacgaccggaaagatgag
aaagagaagaagcataataagtctgtcgatgatgaaatatcttacaaaaaacaagatata
aaacaaggagataaatcttccagtaataaagagttttctttcaccaatgtagaacataat
attgataaaaaaatgaaaaactctcctaagaaatcattgaaacgttctaatcatacttct
acgatagaaattgaacctaaaagatcgagaaaagagaatgctaacagttcaatatcagat
gaatatgaagaaagaattcaaatgaaaaaacaaaattcaatattatatcagaaatatctt
caaaggggtggtgcaagaaatcctggctctaaagaagttccgcagggtgcagaatattgc
ttagcaggtctaagttttgtaataacaggtgttttggattccttagaagataatgaagct
aaagaattaattacaaagtatggtggtcgtattttgcaccaagtatcgaaaaacacagat
tatctcatagtaggcgaagaatatggacctgtaaagatggcaaaggccaatgaattaaag
ataaagaaaatatccgaagatgacttgttggaattaataagaacaagacctaaaggaaaa
gctgaagatgtaaagcaatctcgtgcaagatcgaaagaaaaaccaatgtcaaaggtagaa
ccttgtgtaatgccaaaactgcacaaaactatgaaagaaacaatggaacctataaaaaga
acagtggaacctgtaaaggaaacagcagaacttgtgaatgaaacagtaaaatctgtgaaa
gaaacagtagaatccgtgaaagaaacagcaaaacctgtgaaaaatatagagtcttcagta
acgaaactagatactgaagtagcgaataatactataataacggagaattgtgaagcatta
gttgataaatacagaccaaaaactatgaaacaaatattaggacaacaaggggataaaagt
tctgcaaagaagttatatacttggttattaaattggcataaaaatcaaaatggaactaag
aaacatattaaacctagtccttgggcaaaaaatgatgatggagcatttttcaaagctgct
ctgttatctggatcaccaggtattggtaaaactactactgctcaggttgtatctaatgaa
ttaggtttcgatctgttagaatttaatgcttctgatacaagaagtaagaaacttttaaaa
gaaggagtttctgaaattctatcgaatacaacaataaaaacctacttcagtaatcaaaaa
ggagaagagaaagctaagcatgtattattaatggatgaagttgatggtatggctggtaat
gaagatcgtggaggtttgcaggaattagtcagtttaatcaaatctacggatgtaccaata
atttgtatttgcaatgaccgaaacaatccgaaaatgagaacactctccaattatacattt
gatctcaaatttcaaaaaccaagattagagcaaattagggcggcaatgaagtcaatatgt
tataaagaaaatatacaaatatctacagaacaacttgatcgcttaattgaatcaactaat
caagatattcgtcaagtgattaatcatttgtcattagtcgaaaaatctgatatcgtaaaa
aagacagatagtaaaccaaataaagatttgaaattgggtccttgggacgtagtgaaaaag
gttttaagtttcgaagagaacaaaaatatgagtattaatgaaaaaagtgatcttttcttt
cacgactataatatagcatcgttgtttgtgcaagaaaattatctttcagttatgcctaca
gcaccgaaaactgaattattagaaagagtcgcacaagctgcggagagtatagcattagga
gatgacatagaaaaagaaattcgaagtaacaatgcctggtcccttttgccaatccaagct
tgtttttcttcagttattcctggtaatatgatgtccggagatataaaaaatcaaattaat
tttccatcctggcttgggtgtaactcgaaaaagaataaatttgatagattattgcaagag
ataactgtacatactcgtttaactactggtgcgagtaaggaagctgtcaatttagattat
ttaaatcatataagagatgcaattattagatctttggttaacggtgctgaaggagtagat
gaagcagttaaagttatgaaccattatcatttgttaagagaggatttagattccttaaat
gaagtttctttatggccaggacaacgtaattcacttcaagctgttgatagtaaggtacta
gcagcatttactagaacatataacaagaaatctggtggtgtaccttatactattaatagc
agtaaagtaaaaaaatctacaatggcttcgcaagaaaatttagaatttgtagaagatgat
ataaattcagatgaggaagaagataacatcaatactgataaaatgattaaggcaaaaaag
ccaacggcaaaaaatacaaaagaaacggaaaaaaaaagtagtgaaaaaccttccaccaaa
cgtggaaaaaaaaaataa
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